Ecosyste.ms: Packages

An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.

pypi.org "neuroscience" keyword

Top 9.3% on pypi.org
psyneulink 0.15.1.0
A block modeling system for cognitive neuroscience
73 versions - Latest release: 3 months ago - 2 dependent packages - 1 dependent repositories - 764 downloads last month - 83 stars on GitHub - 1 maintainer
ephys-link 1.3.0
A Python Socket.IO server that allows any Socket.IO-compliant application to communicate with man...
46 versions - Latest release: 1 day ago - 1 dependent repositories - 462 downloads last month - 1 stars on GitHub - 2 maintainers
kilosort 4.0.7
spike sorting pipeline
8 versions - Latest release: about 4 hours ago - 1.77 thousand downloads last month - 393 stars on GitHub - 2 maintainers
vbl-aquarium 0.0.14
Collection of Pydantic models describing data objects passed between Virtual Brain Lab projects.
14 versions - Latest release: about 5 hours ago - 246 downloads last month - 0 stars on GitHub - 4 maintainers
time-rescale 0.2.2
Tools for evaluating the goodness of fit of a pointprocess model via the time rescaling theorem
4 versions - Latest release: over 2 years ago - 1 dependent repositories - 54 downloads last month - 3 stars on GitHub - 2 maintainers
Top 6.4% on pypi.org
muselsl 2.2.2
Stream and visualize EEG data from the Muse headset.
13 versions - Latest release: over 1 year ago - 11 dependent repositories - 641 downloads last month - 575 stars on GitHub - 1 maintainer
nemos 0.1.2
NEural MOdelS, a statistical modeling framework for neuroscience.
3 versions - Latest release: 23 days ago - 176 downloads last month - 28 stars on GitHub - 2 maintainers
oursin 0.6.5
Urchin - Universal Renderer Creating Helpful Images for Neuroscience Python API
18 versions - Latest release: 1 day ago - 1 dependent repositories - 549 downloads last month - 8 stars on GitHub - 2 maintainers
element-array-ephys 0.2.11
DataJoint Element for Extracellular Array Electrophysiology
14 versions - Latest release: 10 months ago - 2 dependent repositories - 187 downloads last month - 3 stars on GitHub - 1 maintainer
movement 0.0.15
Analysis of body movement
15 versions - Latest release: about 2 months ago - 4 dependent repositories - 189 downloads last month - 53 stars on GitHub - 6 maintainers
brainglobe-atlasapi 2.0.5
A lightweight python module to interact with and generate atlases for systems neuroscience.
6 versions - Latest release: about 1 month ago - 4.57 thousand downloads last month - 112 stars on GitHub - 5 maintainers
ohbm 0.01 πŸ’°
python api wrapper for the ohbm conference.
2 versions - Latest release: 8 months ago - 1 dependent repositories - 13 downloads last month - 3 stars on GitHub - 2 maintainers
Top 3.2% on pypi.org
allensdk 2.16.2
core libraries for the allensdk.
80 versions - Latest release: 5 months ago - 14 dependent packages - 40 dependent repositories - 3.97 thousand downloads last month - 324 stars on GitHub - 1 maintainer
neuroanalysis 0.0.2
Functions and modular user interface tools for analysis of patch clamp experiment data.
2 versions - Latest release: about 11 hours ago - 1 dependent repositories - 19 downloads last month - 7 stars on GitHub - 2 maintainers
Top 3.5% on pypi.org
moabb 1.0.0
Mother of All BCI Benchmarks
10 versions - Latest release: 7 months ago - 2 dependent packages - 24 dependent repositories - 5.94 thousand downloads last month - 624 stars on GitHub - 2 maintainers
sco-models 0.2.0
Repository for registered models in the Standard Cortical Observer
2 versions - Latest release: almost 7 years ago - 1 dependent repositories - 22 downloads last month - 0 stars on GitHub - 2 maintainers
hmp 0.3.2
Package for fitting Hidden Multivariate pattern model to time-series
3 versions - Latest release: 3 months ago - 66 downloads last month - 30 stars on GitHub - 2 maintainers
pylabber 0.1.0
A Django app to manage neuroscience research
6 versions - Latest release: almost 4 years ago - 1 dependent repositories - 60 downloads last month - 6 stars on GitHub - 1 maintainer
org.geppetto.recording 0.1.0
Package to create a recording for Geppetto
2 versions - Latest release: over 9 years ago - 2 dependent repositories - 105 downloads last month - 5 stars on GitHub - 2 maintainers
element-animal 0.1.8
DataJoint Element for Animal Management
7 versions - Latest release: 11 months ago - 1 dependent package - 14 dependent repositories - 203 downloads last month - 2 stars on GitHub - 2 maintainers
simply-nwb 0.6.2
Common NWB use cases and simplified interface for common usage
22 versions - Latest release: 4 months ago - 1 dependent repositories - 120 downloads last month - 1 stars on GitHub - 4 maintainers
Top 2.9% on pypi.org
brainflow 5.12.1 πŸ’°
Python Binding for BrainFlow
92 versions - Latest release: 3 months ago - 3 dependent packages - 58 dependent repositories - 2.4 thousand downloads last month - 1,205 stars on GitHub - 1 maintainer
itk-tubetk 1.3.6
An open-source toolkit, led by Kitware, Inc., for the segmentation, registration, and analysis of...
16 versions - Latest release: 4 months ago - 2 dependent repositories - 910 downloads last month - 40 stars on GitHub - 2 maintainers
mrqa 0.2.4
rQA suite of tools offering automatic evaluation of protocol compliance
10 versions - Latest release: 11 months ago - 154 downloads last month - 9 stars on GitHub - 1 maintainer
itk-iomeshswc 0.2.0
ITK module for reading meshes from SWC files, a format for representing neuron morphology.
4 versions - Latest release: over 1 year ago - 1 dependent repositories - 261 downloads last month - 1 stars on GitHub - 2 maintainers
Top 8.7% on pypi.org
neuron-nightly 9.0a1.dev241
Empirically-based simulator for modeling neurons and networks of neurons
363 versions - Latest release: 1 day ago - 1 dependent repositories - 7.21 thousand downloads last month - 329 stars on GitHub - 9 maintainers
bnpm 0.5.3
A library of useful modules for data analysis.
18 versions - Latest release: 15 days ago - 428 downloads last month - 2 stars on GitHub - 2 maintainers
Top 1.9% on pypi.org
antropy 0.1.6 πŸ’°
AntroPy: entropy and complexity of time-series in Python
4 versions - Latest release: 10 months ago - 10 dependent packages - 20 dependent repositories - 31.2 thousand downloads last month - 262 stars on GitHub - 1 maintainer
Top 5.3% on pypi.org
fsleyes 1.12.0
FSLeyes, the FSL image viewer
114 versions - Latest release: 1 day ago - 1 dependent package - 4 dependent repositories - 1.22 thousand downloads last month - 806 stars on GitHub - 2 maintainers
annubes 0.1.1
ANNUBeS: training Artificial Neural Networks to Uncover Behavioral Strategies in neuroscience
2 versions - Latest release: 8 days ago - 234 downloads last month - 2 stars on GitHub - 2 maintainers
brainpylib-cu12x 0.2.8
C++/CUDA Library for BrainPy
10 versions - Latest release: 2 months ago - 1 dependent package - 212 downloads last month - 421 stars on GitHub - 2 maintainers
Top 5.4% on pypi.org
brainpylib 0.3.1
C++/CUDA Library for BrainPy
33 versions - Latest release: about 2 months ago - 2 dependent packages - 2 dependent repositories - 2.72 thousand downloads last month - 421 stars on GitHub - 2 maintainers
brainpylib-cu11x 0.2.8
C++/CUDA Library for BrainPy
10 versions - Latest release: 2 months ago - 1 dependent package - 235 downloads last month - 421 stars on GitHub - 2 maintainers
pynajax 0.1.1
A JAX backend for pynapple.
1 version - Latest release: 1 day ago - 6 stars on GitHub - 2 maintainers
mne-lsl 1.3.1
Real-time framework integrated with MNE-Python for online neuroscience research through LSL-compa...
6 versions - Latest release: about 1 month ago - 1 dependent package - 1.3 thousand downloads last month - 47 stars on GitHub - 6 maintainers
bluecellulab 2.6.12
Biologically detailed neural network simulations and analysis.
102 versions - Latest release: 2 days ago - 1 dependent package - 1 dependent repositories - 2.58 thousand downloads last month - 8 stars on GitHub - 1 maintainer
k-wave-python 0.3.3
Acoustics toolbox for time domain acoustic and ultrasound simulations in complex and tissue-reali...
8 versions - Latest release: about 1 month ago - 2 dependent repositories - 213 downloads last month - 75 stars on GitHub - 1 maintainer
Top 5.1% on pypi.org
brainrender 2.1.8
Visualisation and exploration of brain atlases and other anatomical data
86 versions - Latest release: 15 days ago - 3 dependent packages - 5 dependent repositories - 2.06 thousand downloads last month - 475 stars on GitHub - 6 maintainers
nmodl-nightly 0.6.151
NEURON Modeling Language Source-to-Source Compiler Framework
258 versions - Latest release: 2 days ago - 1 dependent repositories - 7.86 thousand downloads last month - 46 stars on GitHub - 4 maintainers
Top 6.6% on pypi.org
bmtk 1.1.0
Brain Modeling Toolkit
14 versions - Latest release: about 1 month ago - 2 dependent packages - 7 dependent repositories - 428 downloads last month - 257 stars on GitHub - 1 maintainer
lanfactory 0.4.6
Package with convenience functions to train LANs
6 versions - Latest release: 2 months ago - 25 downloads last month - 11 stars on GitHub - 2 maintainers
ieeg 0.5
A Python package for iEEG data processing.
5 versions - Latest release: 6 days ago - 341 downloads last month - 4 stars on GitHub - 2 maintainers
spyglass-neuro 0.5.2
Neuroscience data analysis framework for reproducible research
18 versions - Latest release: 17 days ago - 1 dependent repositories - 207 downloads last month - 77 stars on GitHub - 3 maintainers
theonerig 1.0.2
Timeseries synchronisation toolkit for computational neuroscience
4 versions - Latest release: 12 months ago - 1 dependent repositories - 40 downloads last month - 1 stars on GitHub - 2 maintainers
hyperalignment 0.1.1
Hyperalignment algorithms for functional alignment of fMRI data.
1 version - Latest release: 12 months ago - 69 downloads last month - 2 maintainers
Top 5.0% on pypi.org
pyabf 2.3.8
Python library for reading files in Axon Binary Format (ABF)
63 versions - Latest release: 9 months ago - 7 dependent packages - 19 dependent repositories - 1.73 thousand downloads last month - 95 stars on GitHub - 2 maintainers
pystorm3 0.1.8
Python implementation of some Brainstorm functions
9 versions - Latest release: 2 days ago - 658 downloads last month - 1 stars on GitHub - 2 maintainers
Top 9.3% on pypi.org
clinica 0.8.1
Software platform for clinical neuroimaging studies
38 versions - Latest release: 15 days ago - 1 dependent package - 1 dependent repositories - 515 downloads last month - 213 stars on GitHub - 4 maintainers
Top 7.9% on pypi.org
siibra 1.0a11
siibra - Software interfaces for interacting with brain atlases
78 versions - Latest release: 3 days ago - 3 dependent packages - 4 dependent repositories - 1.97 thousand downloads last month - 44 stars on GitHub - 2 maintainers
Top 9.6% on pypi.org
element-lab 0.3.0
DataJoint Elements for Lab Management
6 versions - Latest release: 11 months ago - 1 dependent package - 17 dependent repositories - 260 downloads last month - 2 stars on GitHub - 1 maintainer
Top 4.6% on pypi.org
efel 5.6.22
Electrophys Feature Extract Library (eFEL)
367 versions - Latest release: 3 days ago - 7 dependent packages - 27 dependent repositories - 17.7 thousand downloads last month - 63 stars on GitHub - 3 maintainers
Top 9.9% on pypi.org
bluepyefe 2.3.19
Blue Brain Python E-feature extraction
111 versions - Latest release: 3 days ago - 1 dependent package - 2 dependent repositories - 1.84 thousand downloads last month - 13 stars on GitHub - 3 maintainers
uvicmuse-debug 1.0.1
Stream and visualize EEG data from the Muse headset.
1 version - Latest release: about 4 years ago - 1 dependent repositories - 17 downloads last month - 10 stars on GitHub - 2 maintainers
pycrostates 0.5.0
A simple open source Python package for EEG microstate segmentation.
8 versions - Latest release: 3 months ago - 139 downloads last month - 33 stars on GitHub - 4 maintainers
neurotorch 0.0.1b5
NeuroTorch: A PyTorch-based framework for deep learning in neuroscience
7 versions - Latest release: 6 months ago - 64 downloads last month - 15 stars on GitHub - 2 maintainers
mne-rsa 0.9
Code for performing Representational Similarity Analysis on MNE-Python data structures.
6 versions - Latest release: 7 months ago - 1 dependent repositories - 80 downloads last month - 51 stars on GitHub - 2 maintainers
asoid 0.3b9
ASOiD: An active learning approach to behavioral classification
1 version - Latest release: about 1 year ago - 22 downloads last month - 45 stars on GitHub - 2 maintainers
clinicadl 1.6.1
Framework for the reproducible processing of neuroimaging data with deep learning methods
33 versions - Latest release: about 1 month ago - 1 dependent repositories - 368 downloads last month - 152 stars on GitHub - 4 maintainers
brainreg-napari 0.1.4
Multi-atlas whole-brain microscopy registration
12 versions - Latest release: 4 months ago - 2 dependent packages - 140 downloads last month - 13 stars on GitHub - 2 maintainers
Top 5.2% on pypi.org
suite2p 0.14.4
Pipeline for calcium imaging
90 versions - Latest release: about 2 months ago - 15 dependent repositories - 1.84 thousand downloads last month - 306 stars on GitHub - 2 maintainers
uvicmuse-dongle 1.0.0
Stream and visualize EEG data from the Muse headset.
1 version - Latest release: over 3 years ago - 1 dependent repositories - 16 downloads last month - 10 stars on GitHub - 2 maintainers
mne-nirs 0.6.0
An MNE compatible package for processing near-infrared spectroscopy data.
16 versions - Latest release: 6 months ago - 1 dependent repositories - 381 downloads last month - 72 stars on GitHub - 4 maintainers
mne-bids-pipeline 1.8.0
A full-flegded processing pipeline for your MEG and EEG data
13 versions - Latest release: about 2 months ago - 1 dependent repositories - 164 downloads last month - 128 stars on GitHub - 4 maintainers
uvicmuse 5.3.3
Stream and visualize EEG data from the Muse headset.
27 versions - Latest release: about 3 years ago - 1 dependent repositories - 255 downloads last month - 10 stars on GitHub - 2 maintainers
psychoanalyze 0.8.9
Interactive analysis and simulation of psychophysical data.
34 versions - Latest release: 9 months ago - 1 dependent repositories - 219 downloads last month - 5 stars on GitHub - 2 maintainers
Top 2.8% on pypi.org
mne-qt-browser 0.6.2
A new backend based on pyqtgraph for the 2D-Data-Browser in MNE-Python
24 versions - Latest release: about 2 months ago - 6 dependent packages - 18 dependent repositories - 3.83 thousand downloads last month - 38 stars on GitHub - 4 maintainers
Top 3.4% on pypi.org
mne-bids 0.11.1
MNE-BIDS: Organizing MEG, EEG, and iEEG data according to the BIDS specification and facilitating...
16 versions - Latest release: over 1 year ago - 9 dependent packages - 50 dependent repositories - 17 thousand downloads last month - 120 stars on GitHub - 3 maintainers
blechpy 2.2.14
Package for exrtacting, processing and analyzing Intan and OpenEphys data
157 versions - Latest release: 8 days ago - 2 dependent repositories - 1.24 thousand downloads last month - 10 stars on GitHub - 4 maintainers
musey 1.0.0
Stream and visualize EEG data from the Muse headset.
12 versions - Latest release: about 4 years ago - 1 dependent repositories - 79 downloads last month - 10 stars on GitHub - 1 maintainer
musestudio 0.2.0
Import Muse recordings. Convert data to MNE and Pandas. View brain data in real time.
2 versions - Latest release: over 1 year ago - 1 dependent repositories - 20 downloads last month - 6 stars on GitHub - 2 maintainers
nngt 2.7.3
Python package to generate and study graphs and detailed
30 versions - Latest release: 3 months ago - 1 dependent repositories - 837 downloads last month - 14 stars on GitHub - 4 maintainers
neurto 0.0.1
TBD... stay tuned
1 version - Latest release: 3 months ago - 11 downloads last month - 2 maintainers
Top 3.7% on pypi.org
openneuro-py 2024.2.0
A Python client for OpenNeuro.
27 versions - Latest release: about 2 months ago - 4 dependent packages - 8 dependent repositories - 2.89 thousand downloads last month - 55 stars on GitHub - 1 maintainer
neurone-loader 2.0.1
Utilities for loading data recorded with NeurOne
11 versions - Latest release: over 2 years ago - 1 dependent repositories - 46 downloads last month - 1 stars on GitHub - 1 maintainer
datashuttle 0.4.0
DataShuttle automates the creation and management of standardised neuroscience project folders.
7 versions - Latest release: 28 days ago - 298 downloads last month - 12 stars on GitHub - 6 maintainers
bluepyemodel 0.0.111
Blue Brain Python Electrical Modeling Pipeline
95 versions - Latest release: 3 days ago - 1.94 thousand downloads last month - 3 stars on GitHub - 4 maintainers
Top 7.6% on pypi.org
spyking-circus 1.1.0
Fast spike sorting by template matching
62 versions - Latest release: over 2 years ago - 2 dependent packages - 7 dependent repositories - 569 downloads last month - 79 stars on GitHub - 2 maintainers
nidatasets 0.1.0
Convenient access to preprocessed brain imaging data.
2 versions - Latest release: almost 2 years ago - 20 downloads last month - 0 stars on GitHub - 2 maintainers
brainlit 0.3.6
Code to process and analyze brainlit data
11 versions - Latest release: 12 months ago - 1 dependent repositories - 157 downloads last month - 24 stars on GitHub - 2 maintainers
fmristats 0.1.1
Modelling the data and not the images in FMRI
8 versions - Latest release: about 5 years ago - 1 dependent repositories - 92 downloads last month - 2 maintainers
calculadora-rustica 1.0.6
This is a project test
6 versions - Latest release: about 7 years ago - 57 downloads last month - 1 maintainer
denest 1.0.1
A declarative interface for specifying and running simulations in NEST.
2 versions - Latest release: almost 4 years ago - 1 dependent repositories - 29 downloads last month - 5 stars on GitHub - 2 maintainers
jigglypuff-rl 0.0.1
PyTorch implementations of reinforcement learning algorithms.
3 versions - Latest release: about 4 years ago - 1 dependent repositories - 18 downloads last month - 397 stars on GitHub - 2 maintainers
neuron_ui 0.0.1
User interface for NEURON based on web technologies and Jupyter
2 versions - Latest release: about 7 years ago - 16 downloads last month - 16 stars on GitHub - 2 maintainers
cgxassist 0.0.0.dev0
A Python library for connecting and communicate with CGX EEG. Uses Bleak as the underlying Blueto...
1 version - Latest release: almost 3 years ago - 18 downloads last month - 0 stars on GitHub - 2 maintainers
Top 8.4% on pypi.org
brainprint 0.4.0
A package to compute BrainPrint (shape descriptors) from FastSurfer/FreeSurfer MRI segmentations
2 versions - Latest release: 11 months ago - 1 dependent package - 2 dependent repositories - 53 downloads last month - 10 stars on GitHub - 2 maintainers
nrnutils 0.3.0
Some tools for use with the NEURON simulator (http://www.neuron.yale.edu/neuron/)
4 versions - Latest release: 12 months ago - 2 dependent repositories - 60 downloads last month - 0 stars on GitHub - 1 maintainer
pyslicetime 0.2
Python Slice Timing Correction
3 versions - Latest release: almost 5 years ago - 1 dependent repositories - 33 downloads last month - 3 stars on GitHub - 2 maintainers
alphawaves 0.5
Alpha Waves Dataset
5 versions - Latest release: 4 months ago - 1 dependent package - 1 dependent repositories - 71 downloads last month - 16 stars on GitHub - 1 maintainer
bcpy2000 1.6
A reimplementation of BCI2000 using Python
2 versions - Latest release: almost 2 years ago - 21 downloads last month - 10 stars on GitHub - 2 maintainers
helmholtz 0.2.0
A framework for creating neuroscience databases
2 versions - Latest release: over 12 years ago - 1 dependent repositories - 19 downloads last month - 2 maintainers
wormneuroatlas 0.0.6
A Python package combining multimodal C. elegans’ neural datasets
9 versions - Latest release: over 1 year ago - 98 downloads last month - 3 stars on GitHub - 1 maintainer
bycycle 1.1.0
Cycle-by-cycle analyses of neural oscillations.
9 versions - Latest release: about 1 year ago - 2 dependent repositories - 203 downloads last month - 78 stars on GitHub - 4 maintainers
wetai 0.0.1
wetAI Python utilities
1 version - Latest release: almost 3 years ago - 1 dependent repositories - 15 downloads last month - 2 stars on GitHub - 8 maintainers
invian 0.0.3
Package to analyze in vivo neural data
2 versions - Latest release: 7 months ago - 21 downloads last month - 0 stars on GitHub - 2 maintainers
Top 3.3% on pypi.org
fooof 1.1.0
fitting oscillations & one-over f
13 versions - Latest release: 8 months ago - 7 dependent packages - 21 dependent repositories - 8.04 thousand downloads last month - 340 stars on GitHub - 2 maintainers
specparam 2.0.0rc2
Spectral parameterization.
3 versions - Latest release: 29 days ago - 250 downloads last month - 340 stars on GitHub - 2 maintainers
fed3live 0.0.2
Package to analyze fed3 files.
2 versions - Latest release: about 1 year ago - 18 downloads last month - 0 stars on GitHub - 1 maintainer
rust-dtw 0.1.14
A rust implementation of dynamic time warping with python bindings!
4 versions - Latest release: almost 3 years ago - 1 dependent repositories - 145 downloads last month - 21 stars on GitHub - 2 maintainers
ndexchange 1.0.10
Python 3 program to download data from NeuroData
11 versions - Latest release: about 5 years ago - 1 dependent repositories - 11 downloads last month - 4 stars on GitHub - 2 maintainers