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pypi.org "neuroscience" keyword

View the packages on the pypi.org package registry that are tagged with the "neuroscience" keyword.

pynapple 0.8.5
PYthon Neural Analysis Package Pour Laboratoires d’Excellence
36 versions - Latest release: 25 days ago - 5 dependent packages - 1 dependent repositories - 2.75 thousand downloads last month - 306 stars on GitHub - 2 maintainers
ngclearn 2.0.0
Simulation software for building and analyzing arbitrary predictive coding, spiking network, and ...
14 versions - Latest release: 6 days ago - 625 downloads last month - 142 stars on GitHub - 1 maintainer
dendrotweaks 0.3.1
A toolbox for exploring dendritic dynamics
1 version - Latest release: 30 days ago - 196 downloads last month - 2 stars on GitHub - 2 maintainers
airflow-imaging-plugins 2.4.3
Airflow plugins to support Neuroimaging tasks.
43 versions - Latest release: over 7 years ago - 1 dependent repositories - 1.02 thousand downloads last month - 15 stars on GitHub - 2 maintainers
Top 5.7% on pypi.org
navis 1.10.0
Neuron Analysis and Visualization library
38 versions - Latest release: 2 months ago - 9 dependent packages - 12 dependent repositories - 2.45 thousand downloads last month - 80 stars on GitHub - 1 maintainer
miv-os 0.3.2
Python software for analysis and computing framework used in MiV project.
29 versions - Latest release: about 4 hours ago - 1 dependent repositories - 798 downloads last month - 13 stars on GitHub - 1 maintainer
Top 1.0% on pypi.org
mne 1.9.0
MNE-Python project for MEG and EEG data analysis.
80 versions - Latest release: 4 months ago - 149 dependent packages - 646 dependent repositories - 183 thousand downloads last month - 2,907 stars on GitHub - 2 maintainers
physion 1.2.1
Vision Physiology Software
7 versions - Latest release: 3 months ago - 347 downloads last month - 3 stars on GitHub - 1 maintainer
niseq 0.0.2
Group sequential tests for neuroimaging
3 versions - Latest release: over 2 years ago - 1 dependent repositories - 208 downloads last month - 8 stars on GitHub - 1 maintainer
osteoid 0.3.1
Skeleton object used for representing neurons, adjacent cells, and organelles.
8 versions - Latest release: about 1 month ago - 4.44 thousand downloads last month - 90 stars on GitHub - 1 maintainer
poremks 1.0.7
for analytics on nanoporous molecular structures
8 versions - Latest release: about 6 years ago - 1 dependent repositories - 320 downloads last month - 217 stars on GitHub - 1 maintainer
kilosort 4.0.32
spike sorting pipeline
33 versions - Latest release: 3 days ago - 5.16 thousand downloads last month - 521 stars on GitHub - 2 maintainers
braian 1.0.5
A python library for easy navigation, visualisation, and analysis of whole-brain quantification d...
6 versions - Latest release: about 1 month ago - 251 downloads last month - 5,851 stars on GitHub - 1 maintainer
icnn 1.2.2
Deep image reconstruction from CNN features (Inverting CNN)
1 version - Latest release: over 5 years ago - 1 dependent repositories - 38 downloads last month - 34 stars on GitHub - 1 maintainer
bnpm 0.5.10
A library of useful modules for data analysis.
23 versions - Latest release: about 12 hours ago - 910 downloads last month - 3 stars on GitHub - 1 maintainer
bids-derivatives 0.0.1
Python package for querying BIDS Apps` processed derivatives.
2 versions - Latest release: over 2 years ago - 82 downloads last month - 2 stars on GitHub - 1 maintainer
nengo_spinnaker 0.4.0
Tools for simulating neural models generated using Nengo on the SpiNNaker platform
9 versions - Latest release: almost 9 years ago - 2 dependent repositories - 193 downloads last month - 13 stars on GitHub - 2 maintainers
pype9 0.2
PYthon PipelinEs for 9ML (Pype9) is a collection of Python pipelines for simulating networks of n...
2 versions - Latest release: over 7 years ago - 1 dependent repositories - 78 downloads last month - 3 stars on GitHub - 1 maintainer
Top 2.7% on pypi.org
pynwb 3.0.0
Package for working with Neurodata stored in the NWB format.
45 versions - Latest release: about 2 months ago - 68 dependent packages - 150 dependent repositories - 114 thousand downloads last month - 171 stars on GitHub - 6 maintainers
Top 6.9% on pypi.org
sleap 1.4.1
SLEAP (Social LEAP Estimates Animal Poses) is a deep learning framework for animal pose tracking.
70 versions - Latest release: 4 months ago - 2 dependent repositories - 2.24 thousand downloads last month - 470 stars on GitHub - 2 maintainers
sco-models 0.2.0
Repository for registered models in the Standard Cortical Observer
2 versions - Latest release: almost 8 years ago - 1 dependent repositories - 65 downloads last month - 0 stars on GitHub - 1 maintainer
replay-identification 0.10.1.dev0
Identify non-local events using multiple information sources
75 versions - Latest release: over 2 years ago - 1 dependent repositories - 1.69 thousand downloads last month - 5 stars on GitHub - 1 maintainer
Top 9.8% on pypi.org
intern 1.4.2
Python SDK for interacting with neuroscience data via the Boss API.
25 versions - Latest release: about 21 hours ago - 3 dependent packages - 11 dependent repositories - 1.23 thousand downloads last month - 21 stars on GitHub - 2 maintainers
explorepy 4.1.0
Python API for Mentalab biosignal aquisition devices
30 versions - Latest release: 18 days ago - 1 dependent repositories - 2.44 thousand downloads last month - 47 stars on GitHub - 1 maintainer
generalized-contrastive-pca 1.0.2
Python implementation of generalized contrastive PCA methods.
2 versions - Latest release: 23 days ago - 256 downloads last month - 16 stars on GitHub - 1 maintainer
Top 1.9% on pypi.org
antropy 0.1.9 💰
AntroPy: entropy and complexity of time-series in Python
6 versions - Latest release: 2 months ago - 13 dependent packages - 20 dependent repositories - 48.7 thousand downloads last month - 265 stars on GitHub - 1 maintainer
Top 8.7% on pypi.org
neuron-nightly 9.0a1.dev1381
Empirically-based simulator for modeling neurons and networks of neurons
485 versions - Latest release: 1 day ago - 1 dependent repositories - 12.4 thousand downloads last month - 403 stars on GitHub - 5 maintainers
Top 2.9% on pypi.org
neuron 8.2.6
Empirically-based simulator for modeling neurons and networks of neurons
21 versions - Latest release: 9 months ago - 9 dependent packages - 28 dependent repositories - 15 thousand downloads last month - 403 stars on GitHub - 8 maintainers
neuron-gpu-nightly 9.0a0
Empirically-based simulator for modeling neurons and networks of neurons
248 versions - Latest release: almost 2 years ago - 1 dependent repositories - 80 downloads last month - 329 stars on GitHub - 3 maintainers
neuron-gpu 8.2.2
Empirically-based simulator for modeling neurons and networks of neurons
7 versions - Latest release: over 2 years ago - 1 dependent repositories - 458 downloads last month - 434 stars on GitHub - 5 maintainers
Top 2.4% on pypi.org
spikeinterface 0.102.2
Python toolkit for analysis, visualization, and comparison of spike sorting output
40 versions - Latest release: 17 days ago - 15 dependent packages - 21 dependent repositories - 56.2 thousand downloads last month - 588 stars on GitHub - 2 maintainers
Top 9.6% on pypi.org
klustakwik2 0.2.7
Clustering for high dimensional neural data
12 versions - Latest release: almost 6 years ago - 1 dependent package - 10 dependent repositories - 567 downloads last month - 32 stars on GitHub - 4 maintainers
brian2modelfitting 0.4
Modelfitting Toolbox for the Brian 2 simulator
3 versions - Latest release: almost 5 years ago - 1 dependent repositories - 109 downloads last month - 14 stars on GitHub - 3 maintainers
teste-pycluster 1.0.0
This is a project test
2 versions - Latest release: almost 8 years ago - 1 dependent repositories - 98 downloads last month - 1 maintainer
hypyp 0.5.0b4
The Hyperscanning Python Pipeline.
25 versions - Latest release: about 1 month ago - 2 dependent repositories - 963 downloads last month - 77 stars on GitHub - 2 maintainers
welchspsd 0.1.0
A Python library for calculating welchsPSD
1 version - Latest release: over 1 year ago - 54 downloads last month - 30 stars on GitHub - 1 maintainer
pyfinch 0.0.1
A python package for analyzing neural & bioacoustics signals from songbirds
1 version - Latest release: about 3 years ago - 1 dependent repositories - 57 downloads last month - 7 stars on GitHub - 1 maintainer
richfile 0.5.0
A library for reading and writing hierarchical data files
10 versions - Latest release: 1 day ago - 1.31 thousand downloads last month - 2 stars on GitHub - 1 maintainer
neurocurator 0.4.4
Application to perform curation of neuroscientific literature.
5 versions - Latest release: over 6 years ago - 1 dependent repositories - 138 downloads last month - 16 stars on GitHub - 2 maintainers
pupeyes 0.2.2
PupEyes: Your Buddy for Pupil Size and Eye Movement Data Analysis
4 versions - Latest release: 16 days ago - 340 downloads last month - 3 stars on GitHub - 1 maintainer
mio 0.6.0
Generic I/O for miniscopes
2 versions - Latest release: 4 months ago - 1 dependent repositories - 65 downloads last month - 6 stars on GitHub - 2 maintainers
Top 9.3% on pypi.org
brainiak 0.9.1
Brain Imaging Analysis Kit
20 versions - Latest release: over 5 years ago - 5 dependent repositories - 2.25 thousand downloads last month - 322 stars on GitHub - 3 maintainers
fed3bandit 0.0.5
Package to analyze FED3Bandit files.
5 versions - Latest release: over 1 year ago - 257 downloads last month - 0 stars on GitHub - 1 maintainer
Top 2.4% on pypi.org
datajoint 0.14.4
DataJoint for Python is a framework for scientific workflow management based on relational princi...
66 versions - Latest release: 2 days ago - 20 dependent packages - 136 dependent repositories - 8.16 thousand downloads last month - 175 stars on GitHub - 2 maintainers
experiment 0.0.0-alpha
The Experiment package delivers a library of stimulation and recording objects.
1 version - Latest release: over 13 years ago - 4 dependent repositories - 81 downloads last month - 1 maintainer
dmf-utils 0.1.3
DMF's Python package providing reusable functionalities for neuroscience research.
4 versions - Latest release: 7 months ago - 191 downloads last month - 0 stars on GitHub - 1 maintainer
nat 0.4.3
Module to use the annotations created with NeuroCurator.
4 versions - Latest release: over 6 years ago - 2 dependent repositories - 221 downloads last month - 8 stars on GitHub - 2 maintainers
fis-calculator 0.0.1
FIS calculator for neurological protein-protein interactions
1 version - Latest release: almost 2 years ago - 47 downloads last month - 1 maintainer
Top 8.0% on pypi.org
sima 1.3.2
Software for analysis of sequential imaging data
18 versions - Latest release: over 8 years ago - 1 dependent package - 6 dependent repositories - 1.96 thousand downloads last month - 3 maintainers
scdn 0.0.2
Estimating high dimensional ODE models from convoluted observations with an application to fMRI
3 versions - Latest release: almost 7 years ago - 1 dependent repositories - 130 downloads last month - 3 stars on GitHub - 1 maintainer
Top 5.4% on pypi.org
brainpylib 0.3.1
C++/CUDA Library for BrainPy
33 versions - Latest release: about 1 year ago - 6 dependent packages - 2 dependent repositories - 6.45 thousand downloads last month - 421 stars on GitHub - 2 maintainers
chemesis3 0.0.0-alpha
Kinetic reaction and biochemical reaction pathways for G-3.
1 version - Latest release: over 13 years ago - 2 dependent repositories - 90 downloads last month - 1 maintainer
bsl 0.6.4
Real-time framework for online neuroscience research through LSL-compatible devices.
15 versions - Latest release: over 1 year ago - 717 downloads last month - 0 stars on GitHub - 1 maintainer
population-analysis 1.0.0
Analysis code for a papers population analysis
1 version - Latest release: 3 months ago - 72 downloads last month - 1 maintainer
filemanager 1.0.12
13 versions - Latest release: almost 8 years ago - 1 dependent repositories - 544 downloads last month - 1 maintainer
Top 7.3% on pypi.org
phy 1.0.9
Spike sorting and ephys data analysis for 1000 channels and beyond
22 versions - Latest release: over 8 years ago - 2 dependent packages - 9 dependent repositories - 792 downloads last month - 345 stars on GitHub - 2 maintainers
ephys-link 2.0.2
A Python Socket.IO server that allows any Socket.IO-compliant application to communicate with man...
57 versions - Latest release: 10 days ago - 1 dependent repositories - 1.57 thousand downloads last month - 1 stars on GitHub - 2 maintainers
itk-tubetk 1.4.1
An open-source toolkit, led by Kitware, Inc., for the segmentation, registration, and analysis of...
19 versions - Latest release: about 1 month ago - 2 dependent repositories - 3.61 thousand downloads last month - 52 stars on GitHub - 2 maintainers
Top 2.9% on pypi.org
brainflow 5.16.0 💰
Python Binding for BrainFlow
99 versions - Latest release: 3 months ago - 3 dependent packages - 58 dependent repositories - 3.45 thousand downloads last month - 1,389 stars on GitHub - 1 maintainer
Top 9.0% on pypi.org
ghostipy 0.2.2
Signal processing and spectral analysis toolbox
10 versions - Latest release: over 2 years ago - 1 dependent package - 3 dependent repositories - 721 downloads last month - 1 maintainer
stimrespflow 2.1.10
A framework for boosting the implementation of stimulus-response research code in the field of co...
9 versions - Latest release: 26 days ago - 370 downloads last month - 2 stars on GitHub - 1 maintainer
dfpy 0.1.0
DFPy: A backend-free numerical integration library for differential equations
1 version - Latest release: about 4 years ago - 1 dependent repositories - 46 downloads last month - 575 stars on GitHub - 1 maintainer
Top 3.8% on pypi.org
questplus 0.0.5
A QUEST+ implementation in Python.
9 versions - Latest release: over 5 years ago - 1 dependent package - 46 dependent repositories - 8.78 thousand downloads last month - 1 maintainer
itk-iomeshswc 0.2.0
ITK module for reading meshes from SWC files, a format for representing neuron morphology.
4 versions - Latest release: over 2 years ago - 1 dependent repositories - 573 downloads last month - 1 stars on GitHub - 1 maintainer
muse-py 0.0.1
A Python library for connecting and communicate with MUSE headbands. Uses Bleak as the underlying...
1 version - Latest release: about 4 years ago - 1 dependent repositories - 24 downloads last month - 1 maintainer
sco 0.4.0
Library for the prediction of cortical responses to visual stimuli: the Standard Cortical Observer
6 versions - Latest release: about 3 years ago - 1 dependent repositories - 193 downloads last month - 5 stars on GitHub - 1 maintainer
Top 9.9% on pypi.org
element-session 0.1.6
DataJoint Element for Session Management
5 versions - Latest release: over 1 year ago - 1 dependent package - 14 dependent repositories - 257 downloads last month - 2 stars on GitHub - 1 maintainer
seapipe 0.5.4
A package pipeline for Sleep Events Analysis of EEG data.
27 versions - Latest release: 3 days ago - 863 downloads last month - 0 stars on GitHub - 1 maintainer
spikesorters 0.4.5
Python wrappers for popular spike sorters
25 versions - Latest release: over 3 years ago - 1 dependent package - 7 dependent repositories - 615 downloads last month - 20 stars on GitHub - 1 maintainer
mesmerize 0.8.0
Calcium imaging analysis platform
16 versions - Latest release: over 3 years ago - 1 dependent repositories - 459 downloads last month - 58 stars on GitHub - 1 maintainer
gebaspike 1.1.0
gebaSpike - GUI designed to improve manual spike sorting of in-vivo electrophysiology data.
12 versions - Latest release: over 4 years ago - 1 dependent repositories - 334 downloads last month - 2 stars on GitHub - 1 maintainer
bmtool 0.6.9
BMTool
93 versions - Latest release: 16 days ago - 1 dependent repositories - 5.82 thousand downloads last month - 4 stars on GitHub - 2 maintainers
jigglypuff-rl 0.0.1
PyTorch implementations of reinforcement learning algorithms.
3 versions - Latest release: about 5 years ago - 1 dependent repositories - 88 downloads last month - 404 stars on GitHub - 1 maintainer
ephysvibe 0.0.2
.
2 versions - Latest release: over 2 years ago - 99 downloads last month - 2 stars on GitHub - 1 maintainer
deinterlacing 1.0.5
A python library for deinterlacing images collected using resonant-scanning microscopes.
5 versions - Latest release: 4 days ago - 397 downloads last month - 0 stars on GitHub - 1 maintainer
calscipy 0.8.3
A toolbox for analyzing, designing, and visualizing multiphoton imaging & optogenetics experiments.
33 versions - Latest release: about 1 year ago - 1.6 thousand downloads last month - 1 stars on GitHub - 1 maintainer
replay-classification 0.6.1
Non-parametric categorization of replay content from multiunit spiking activity
15 versions - Latest release: over 6 years ago - 1 dependent repositories - 478 downloads last month - 7 stars on GitHub - 1 maintainer
cubids-bond-fork 0.1.0
BIDS On Disk Editor
1 version - Latest release: over 3 years ago - 1 dependent package - 1 dependent repositories - 57 downloads last month - 25 stars on GitHub - 1 maintainer
d2b 1.4.2
Organize data in the BIDS format
21 versions - Latest release: over 2 years ago - 6 dependent repositories - 579 downloads last month - 0 stars on GitHub - 1 maintainer
spiketraindist 0.0.1
Calculate spike train distances
1 version - Latest release: 7 months ago - 54 downloads last month - 1 maintainer
uvicmuse-dongle 1.0.0
Stream and visualize EEG data from the Muse headset.
1 version - Latest release: over 4 years ago - 1 dependent repositories - 23 downloads last month - 14 stars on GitHub - 1 maintainer
sim2bids 2.0.1
App to preprocess and convert simulation data
40 versions - Latest release: over 2 years ago - 321 downloads last month - 3 stars on GitHub - 1 maintainer
musey 1.0.0
Stream and visualize EEG data from the Muse headset.
12 versions - Latest release: about 5 years ago - 1 dependent repositories - 197 downloads last month - 14 stars on GitHub - 1 maintainer
neurotic 1.5.0
Curate, visualize, annotate, and share your behavioral ephys data using Python
20 versions - Latest release: over 4 years ago - 1 dependent repositories - 499 downloads last month - 33 stars on GitHub - 1 maintainer
swcgeom 0.19.0
Neuron geometry library for swc format
31 versions - Latest release: 4 days ago - 394 downloads last month - 8 stars on GitHub - 1 maintainer
Top 9.6% on pypi.org
bdpy 0.25.1
Brain decoder toolbox for Python
23 versions - Latest release: 6 months ago - 4 dependent repositories - 780 downloads last month - 31 stars on GitHub - 1 maintainer
uvicmuse 5.3.3
Stream and visualize EEG data from the Muse headset.
27 versions - Latest release: about 4 years ago - 1 dependent repositories - 582 downloads last month - 14 stars on GitHub - 1 maintainer
pyrasa 1.0.0
Spectral parametrization based on IRASA
1 version - Latest release: 6 months ago - 67 downloads last month - 9 stars on GitHub - 2 maintainers
spykesim 1.2.4
Python module that offers functions for measuring the similarity between two segmented multi-neur...
33 versions - Latest release: over 5 years ago - 1 dependent repositories - 763 downloads last month - 22 stars on GitHub - 1 maintainer
psychos 0.0.4
Package for creating experiments for behavioural research.
4 versions - Latest release: 4 days ago - 190 downloads last month - 0 stars on GitHub - 1 maintainer
brainblocks 0.7.1
BrainBlocks Toolkit
1 version - Latest release: almost 3 years ago - 1 dependent repositories - 345 downloads last month - 60 stars on GitHub - 1 maintainer
iblviewer 2.4.7
An interactive GPU-accelerated 3D viewer based on VTK
2 versions - Latest release: about 3 years ago - 1 dependent repositories - 57 downloads last month - 10 stars on GitHub - 1 maintainer
florin 0.0.2
Fast image segmentation without needing to learn a thing.
3 versions - Latest release: over 5 years ago - 1 dependent repositories - 133 downloads last month - 9 stars on GitHub - 1 maintainer
expcontrol 0.2.3
Easy control of typical experiments in psychology and neuroscience, including stimulus presentati...
7 versions - Latest release: almost 9 years ago - 2 dependent repositories - 368 downloads last month - 1 maintainer
pyphinb 2.9.4 💰
Python library for computing integrated information.
15 versions - Latest release: over 5 years ago - 1 dependent repositories - 278 downloads last month - 389 stars on GitHub - 1 maintainer
Top 6.7% on pypi.org
pyphi 1.2.0 💰
Python library for computing integrated information.
24 versions - Latest release: almost 6 years ago - 12 dependent repositories - 2.04 thousand downloads last month - 389 stars on GitHub - 1 maintainer
neurocarto 0.1.0
A web-interface channelmap editor for Neuropixels probe familiy
5 versions - Latest release: 3 months ago - 170 downloads last month - 1 stars on GitHub - 1 maintainer
csng-invariances 0.0.4
Reimplementation of Kovacs 2021: Finding invariances in sensory coding through gradient methods. ...
2 versions - Latest release: over 3 years ago - 78 downloads last month - 0 stars on GitHub - 1 maintainer
pyllusion 0.0.12 💰
A Parametric Framework to Generate Visual Illusions.
9 versions - Latest release: over 3 years ago - 1 dependent repositories - 490 downloads last month - 67 stars on GitHub - 2 maintainers
bossphorus 0.1.0
Baby bossDB
1 version - Latest release: almost 7 years ago - 29 downloads last month - 1 maintainer