pypi.org "nifti" keyword
View the packages on the pypi.org package registry that are tagged with the "nifti" keyword.
Top 0.5% on pypi.org
45 versions - Latest release: 6 months ago - 390 dependent packages - 3,394 dependent repositories - 815 thousand downloads last month - 650 stars on GitHub - 2 maintainers
nibabel 5.3.2
Access a multitude of neuroimaging data formats45 versions - Latest release: 6 months ago - 390 dependent packages - 3,394 dependent repositories - 815 thousand downloads last month - 650 stars on GitHub - 2 maintainers
cell-bin 1.3.4 💰
A framework for generating single-cell gene expression data11 versions - Latest release: about 1 year ago - 1 dependent package - 546 downloads last month - 8,959 stars on GitHub - 1 maintainer
dtiplayground-native 0.0.1
DTIPlayground Native3 versions - Latest release: about 2 years ago - 85 downloads last month - 0 stars on GitHub - 3 maintainers
nifti2gif 0.0.5
Create GIF from NIfTI image.5 versions - Latest release: about 2 years ago - 149 downloads last month - 0 stars on GitHub - 1 maintainer
erwin 1.3.0
Toolbox to generate quantitative maps from MRI images8 versions - Latest release: 4 months ago - 1 dependent repositories - 284 downloads last month - 12 stars on GitHub - 1 maintainer
med-imagetools 1.23.2
Med-Imagetools: Transparent and Reproducible Medical Image Processing Pipelines in Python65 versions - Latest release: 2 months ago - 2 dependent packages - 1 dependent repositories - 2.11 thousand downloads last month - 46 stars on GitHub - 2 maintainers
pathmatcher 1.8.8
Regular Expression Path Matcher - Easily batch manipulate folders and files trees with regular ex...10 versions - Latest release: 3 months ago - 1 dependent repositories - 383 downloads last month - 4 stars on GitHub - 1 maintainer
nekton 0.2.6
A python package for DICOM to NifTi and NifTi to DICOM-SEG and GSPS conversion13 versions - Latest release: over 1 year ago - 1 dependent repositories - 366 downloads last month - 10 stars on GitHub - 3 maintainers
dtiplayground 0.5.9
An integrated framework for DWI Image QC and processing113 versions - Latest release: 8 months ago - 1 dependent repositories - 1.78 thousand downloads last month - 12 stars on GitHub - 4 maintainers
nii2dcm 0.1.5
nii2dcm: NIfTI to DICOM creation with Python4 versions - Latest release: about 1 year ago - 1 dependent repositories - 378 downloads last month - 68 stars on GitHub - 1 maintainer
pylaynii 0.0.0
Layer-MRI analysis in python.1 version - Latest release: about 5 years ago - 1 dependent repositories - 31 downloads last month - 5 stars on GitHub - 1 maintainer
ciftify 2.3.3
The tools of the Human Connectome Project (HCP) adapted for working with non-HCP datasets3 versions - Latest release: over 4 years ago - 169 downloads last month - 120 stars on GitHub - 1 maintainer
ipyniivue-experimental 0.0.6
a WebGL2 based medical image viewer. Supports over 30 formats of volumes and meshes.6 versions - Latest release: about 1 year ago - 254 downloads last month - 315 stars on GitHub - 2 maintainers
nii-plot 1.0.0 💰
Plot mean NIfTI timeseries2 versions - Latest release: almost 3 years ago - 1 dependent repositories - 81 downloads last month - 0 stars on GitHub - 1 maintainer
nii-info 1.0.1 💰
Display NIfTI image information in a tabular format3 versions - Latest release: almost 3 years ago - 1 dependent repositories - 109 downloads last month - 0 stars on GitHub - 1 maintainer
nii2png 0.3.0 💰
A lightweight neuroimaging .nii to .png converter2 versions - Latest release: almost 6 years ago - 1 dependent repositories - 152 downloads last month - 122 stars on GitHub - 1 maintainer
som 0.2.3 💰
stanford open modules for python21 versions - Latest release: over 7 years ago - 1 dependent repositories - 437 downloads last month - 7 stars on GitHub - 1 maintainer
ttoz 0.1.2 💰
Convert a whole brain T score map to a Z score map without loss of precision for strongly positiv...3 versions - Latest release: about 9 years ago - 2 dependent repositories - 79 downloads last month - 18 stars on GitHub - 1 maintainer
imio 0.3.1
Loading and saving of image data.22 versions - Latest release: about 1 year ago - 9 dependent packages - 2 dependent repositories - 820 downloads last month - 10 stars on GitHub - 1 maintainer
fmridata 0.11
A nifti utility2 versions - Latest release: over 9 years ago - 1 dependent repositories - 48 downloads last month - 1 maintainer
nanslice 1.0.0
Scripts to slice and display neuroimages (probably stored in nifti format)3 versions - Latest release: about 5 years ago - 1 dependent repositories - 128 downloads last month - 39 stars on GitHub - 1 maintainer
Top 8.7% on pypi.org
39 versions - Latest release: 22 days ago - 2 dependent repositories - 1.92 thousand downloads last month - 137 stars on GitHub - 1 maintainer
bidscoin 4.6.1
Converts and organises raw MRI data-sets according to the Brain Imaging Data Structure (BIDS)39 versions - Latest release: 22 days ago - 2 dependent repositories - 1.92 thousand downloads last month - 137 stars on GitHub - 1 maintainer
bcblib 0.4.0
33 versions - Latest release: 8 months ago - 1 dependent repositories - 1.04 thousand downloads last month - 2 stars on GitHub - 1 maintainerpydcm2niix 1.0.20220116
DCM2NIIX Python package2 versions - Latest release: over 3 years ago - 1 dependent repositories - 71 downloads last month - 814 stars on GitHub - 1 maintainer
gema-utils 0.0.1
A python suite to complement CLARA (NVIDIA's healthcare application)1 version - Latest release: about 5 years ago - 1 dependent repositories - 51 downloads last month - 1 maintainer
nifti2png 0.0.2 💰
Converts nifti to png, _not_ a general purpose converter2 versions - Latest release: almost 6 years ago - 1 dependent repositories - 100 downloads last month - 0 stars on GitHub - 1 maintainer
Top 7.1% on pypi.org
10 versions - Latest release: almost 2 years ago - 3 dependent packages - 2 dependent repositories - 1.18 thousand downloads last month - 814 stars on GitHub - 2 maintainers
pydra-dcm2niix 1.2.1
pydra-dcm2niix contains Pydra task specifications for the Dcm2niix converter10 versions - Latest release: almost 2 years ago - 3 dependent packages - 2 dependent repositories - 1.18 thousand downloads last month - 814 stars on GitHub - 2 maintainers
convert-source 0.1.1
Converts and organises source MR image data-sets in accordance with the Brain Imaging Data Struct...15 versions - Latest release: about 4 years ago - 1 dependent repositories - 724 downloads last month - 1 stars on GitHub - 1 maintainer
nii-rs 0.1.2
Rust library for reading/writing NIfTI files, with SimpleITK/Nibabel-like APIs, native Rust suppo...1 version - Latest release: about 2 months ago - 550 downloads last month - 0 stars on GitHub - 1 maintainer
nifti-converter 0.1.0
Convert NIfTI files to usual image formats1 version - Latest release: 6 months ago - 63 downloads last month - 1 stars on GitHub - 1 maintainer
mikan-rs 0.1.4
A medical image kit for segmentation metrics evaluation, native Rust support, and Python bindings...3 versions - Latest release: about 2 months ago - 2.09 thousand downloads last month - 1 stars on GitHub - 1 maintainer
Top 2.4% on pypi.org
90 versions - Latest release: 23 days ago - 26 dependent packages - 248 dependent repositories - 64.4 thousand downloads last month - 356 stars on GitHub - 1 maintainer
dicom2nifti 2.6.0
package for converting dicom files to nifti90 versions - Latest release: 23 days ago - 26 dependent packages - 248 dependent repositories - 64.4 thousand downloads last month - 356 stars on GitHub - 1 maintainer
pyvoxel 0.0.2
An AI-powered open-source medical image analysis toolbox3 versions - Latest release: almost 2 years ago - 1 dependent package - 200 downloads last month - 25 stars on GitHub - 2 maintainers
retinex_for_mri 0.2.9
Retinex algorithm for MRI data.4 versions - Latest release: about 8 years ago - 87 downloads last month - 23 stars on GitHub - 1 maintainer
neuroimagingtools 1.1.4
Neuroimaging analysis tools6 versions - Latest release: 10 months ago - 168 downloads last month - 10 stars on GitHub - 1 maintainer
Top 5.3% on pypi.org
123 versions - Latest release: about 2 months ago - 1 dependent package - 4 dependent repositories - 1.83 thousand downloads last month - 814 stars on GitHub - 1 maintainer
fsleyes 1.14.2
FSLeyes, the FSL image viewer123 versions - Latest release: about 2 months ago - 1 dependent package - 4 dependent repositories - 1.83 thousand downloads last month - 814 stars on GitHub - 1 maintainer
deepneuro 0.2.3
DeepNeuro: A deep learning python package for neuroimaging data.6 versions - Latest release: almost 6 years ago - 1 dependent repositories - 158 downloads last month - 123 stars on GitHub - 2 maintainers
iphigen 1.0.0
Retinex & color balance algorithms for image enhancement.1 version - Latest release: about 6 years ago - 1 dependent repositories - 34 downloads last month - 23 stars on GitHub - 1 maintainer
d2b-sidecarless-nii 1.0.0
Plugin for the d2b package to handle NIfTI images without sidecars1 version - Latest release: over 3 years ago - 1 dependent repositories - 67 downloads last month - 0 stars on GitHub - 1 maintainer
biswebpython 1.1.0b7
A Medical Image Analysis Package2 versions - Latest release: over 5 years ago - 1 dependent repositories - 64 downloads last month - 76 stars on GitHub - 1 maintainer
niftiai 0.1.2
Train neural nets on 3D images (e.g. MRIs) ðŸ§4 versions - Latest release: 2 months ago - 193 downloads last month - 0 stars on GitHub - 1 maintainer
nifti2dicom 1.2.6
A package to convert NIfTI images to DICOM format using a reference DICOM series.23 versions - Latest release: 7 months ago - 2 dependent packages - 1 dependent repositories - 542 downloads last month - 20 stars on GitHub - 1 maintainer
data-tracking 1.7.3
Extract meta-data from DICOM and NIFTI files20 versions - Latest release: over 6 years ago - 2 dependent repositories - 264 downloads last month - 4 stars on GitHub - 2 maintainers
crop-nifti-by-mouse-click 0.0.3
open nifti and crop it2 versions - Latest release: over 2 years ago - 74 downloads last month - 1 maintainer
dcdf 0.1.8
Package to compute DCDF for nifti formatted MRI data.9 versions - Latest release: almost 4 years ago - 1 dependent repositories - 136 downloads last month - 0 stars on GitHub - 1 maintainer
Top 2.5% on pypi.org
121 versions - Latest release: 2 months ago - 9 dependent packages - 18 dependent repositories - 23.7 thousand downloads last month - 814 stars on GitHub - 1 maintainer
fslpy 3.22.0
FSL Python library121 versions - Latest release: 2 months ago - 9 dependent packages - 18 dependent repositories - 23.7 thousand downloads last month - 814 stars on GitHub - 1 maintainer
Top 4.4% on pypi.org
3 versions - Latest release: 4 months ago - 8 dependent packages - 3 dependent repositories - 3.31 thousand downloads last month - 814 stars on GitHub - 1 maintainer
dcm2niix 1.0.20241211
DCM2NIIX Python package3 versions - Latest release: 4 months ago - 8 dependent packages - 3 dependent repositories - 3.31 thousand downloads last month - 814 stars on GitHub - 1 maintainer
nifti-snapshot 0.1.20
First release to test pypi21 versions - Latest release: almost 2 years ago - 1 dependent repositories - 274 downloads last month - 5 stars on GitHub - 1 maintainer
qtim_tools 0.1.12
A library for medical imaging analysis, with an emphasis on MRI, machine learning, and neuroimagi...12 versions - Latest release: about 8 years ago - 183 downloads last month - 11 stars on GitHub - 1 maintainer
Related Keywords
neuroimaging
21
dicom
18
mri
17
nii
10
python
8
medical-imaging
7
neuroscience
7
nifti-format
7
jpeg
6
dcm
6
image-processing
6
dicom-images
6
gz
6
mri-images
6
research
6
dcm2niix
6
bids
5
jpeg-image
5
bids-format
5
mricrogl
5
nitrc
5
nrrd
4
imaging
4
dti
4
brain-imaging
4
pet
3
MRI
3
gifti
3
medical
3
machine-learning
3
deep-learning
3
nibabel
3
fmri
3
png
3
ITK
2
color-balance
2
data-sharing
2
data-standards
2
pytorch
2
parrec
2
rust
2
dce
2
dsc
2
machine learning
2
gif
2
cli
2
neuro
2
rec
2
par
2
converter
2
viewer
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image
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brain
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tiff
2
cifti
2
dtiplayground
2
dmriprep
2
dmriatlas
2
dmriautotract
2
dmrifiberprofile
2
learning
2
fMRI
2
quality control
2
qc
2
dwi
2
deep learning
1
cellular-automata
1
preprocessing
1
tiff-series
1
saving
1
loading
1
maps
1
spec2nii
1
PsychoPy
1
multi-echo-combine
1
NeuroBS
1
bidsapp
1
defacing
1
multi-echo
1
mrs
1
hpc
1
deface
1
echo-combination
1
bids-apps
1
skull-stripping
1
HPC
1
computer vision
1
keras
1
theano
1
tensorflow
1
neuroimaging-analysis
1
nih-brain-initiative
1
webassembly
1
brain-mri
1
colab
1
fastai
1
gpu
1
data-factory
1
multiple_file
1
crop
1