Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
pypi.org "neuroimaging" keyword
Top 0.5% on pypi.org
42 versions - Latest release: 2 months ago - 284 dependent packages - 3,394 dependent repositories - 485 thousand downloads last month - 604 stars on GitHub - 2 maintainers
nibabel 5.2.1
Access a multitude of neuroimaging data formats42 versions - Latest release: 2 months ago - 284 dependent packages - 3,394 dependent repositories - 485 thousand downloads last month - 604 stars on GitHub - 2 maintainers
Top 0.7% on pypi.org
64 versions - Latest release: about 1 year ago - 43 dependent packages - 1,107 dependent repositories - 147 thousand downloads last month - 733 stars on GitHub - 4 maintainers
nipype 1.8.6
Neuroimaging in Python: Pipelines and Interfaces64 versions - Latest release: about 1 year ago - 43 dependent packages - 1,107 dependent repositories - 147 thousand downloads last month - 733 stars on GitHub - 4 maintainers
Top 1.0% on pypi.org
77 versions - Latest release: 21 days ago - 124 dependent packages - 646 dependent repositories - 116 thousand downloads last month - 2,511 stars on GitHub - 3 maintainers
mne 1.7.0
MNE-Python project for MEG and EEG data analysis.77 versions - Latest release: 21 days ago - 124 dependent packages - 646 dependent repositories - 116 thousand downloads last month - 2,511 stars on GitHub - 3 maintainers
Top 5.0% on pypi.org
3 versions - Latest release: 9 months ago - 54 dependent packages - 934 dependent repositories - 107 thousand downloads last month - 13 stars on GitHub - 2 maintainers
fitz 0.0.1.dev1
Fitz: Workflow Mangement for neuroimaging data.3 versions - Latest release: 9 months ago - 54 dependent packages - 934 dependent repositories - 107 thousand downloads last month - 13 stars on GitHub - 2 maintainers
Top 2.7% on pypi.org
82 versions - Latest release: about 1 month ago - 4 dependent packages - 87 dependent repositories - 33.9 thousand downloads last month - 176 stars on GitHub - 4 maintainers
bids-validator 1.14.5
Validator for the Brain Imaging Data Structure82 versions - Latest release: about 1 month ago - 4 dependent packages - 87 dependent repositories - 33.9 thousand downloads last month - 176 stars on GitHub - 4 maintainers
Top 1.4% on pypi.org
27 versions - Latest release: 2 months ago - 38 dependent packages - 204 dependent repositories - 31.8 thousand downloads last month - 651 stars on GitHub - 4 maintainers
dipy 1.9.0
Diffusion MRI Imaging in Python27 versions - Latest release: 2 months ago - 38 dependent packages - 204 dependent repositories - 31.8 thousand downloads last month - 651 stars on GitHub - 4 maintainers
Top 2.3% on pypi.org
48 versions - Latest release: 5 months ago - 40 dependent packages - 163 dependent repositories - 29.4 thousand downloads last month - 211 stars on GitHub - 3 maintainers
pybids 0.16.4
bids: interface with datasets conforming to BIDS48 versions - Latest release: 5 months ago - 40 dependent packages - 163 dependent repositories - 29.4 thousand downloads last month - 211 stars on GitHub - 3 maintainers
Top 6.7% on pypi.org
9 versions - Latest release: about 2 months ago - 1 dependent package - 1 dependent repositories - 26 thousand downloads last month - 252 stars on GitHub - 4 maintainers
bidsschematools 0.8.0
Python tools for working with the BIDS schema.9 versions - Latest release: about 2 months ago - 1 dependent package - 1 dependent repositories - 26 thousand downloads last month - 252 stars on GitHub - 4 maintainers
Top 6.3% on pypi.org
47 versions - Latest release: about 2 months ago - 16 dependent packages - 31 dependent repositories - 24.3 thousand downloads last month - 70 stars on GitHub - 4 maintainers
templateflow 24.2.0
TemplateFlow Python Client - TemplateFlow is the Zone of neuroimaging templates.47 versions - Latest release: about 2 months ago - 16 dependent packages - 31 dependent repositories - 24.3 thousand downloads last month - 70 stars on GitHub - 4 maintainers
Top 3.4% on pypi.org
16 versions - Latest release: over 1 year ago - 9 dependent packages - 50 dependent repositories - 17 thousand downloads last month - 120 stars on GitHub - 3 maintainers
mne-bids 0.11.1
MNE-BIDS: Organizing MEG, EEG, and iEEG data according to the BIDS specification and facilitating...16 versions - Latest release: over 1 year ago - 9 dependent packages - 50 dependent repositories - 17 thousand downloads last month - 120 stars on GitHub - 3 maintainers
Top 7.5% on pypi.org
6 versions - Latest release: about 1 year ago - 1 dependent package - 4 dependent repositories - 9.13 thousand downloads last month - 26 stars on GitHub - 1 maintainer
neuroglancer-scripts 1.1.0
Conversion of images to the Neuroglancer pre-computed format6 versions - Latest release: about 1 year ago - 1 dependent package - 4 dependent repositories - 9.13 thousand downloads last month - 26 stars on GitHub - 1 maintainer
Top 4.4% on pypi.org
2 versions - Latest release: almost 2 years ago - 8 dependent packages - 3 dependent repositories - 4.48 thousand downloads last month - 805 stars on GitHub - 2 maintainers
dcm2niix 1.0.20220715
DCM2NIIX Python package2 versions - Latest release: almost 2 years ago - 8 dependent packages - 3 dependent repositories - 4.48 thousand downloads last month - 805 stars on GitHub - 2 maintainers
Top 4.6% on pypi.org
181 versions - Latest release: 4 days ago - 11 dependent repositories - 4.3 thousand downloads last month - 607 stars on GitHub - 5 maintainers
fmriprep 23.2.2
A robust and easy-to-use pipeline for preprocessing of diverse fMRI data181 versions - Latest release: 4 days ago - 11 dependent repositories - 4.3 thousand downloads last month - 607 stars on GitHub - 5 maintainers
Top 3.7% on pypi.org
23 versions - Latest release: about 16 hours ago - 2 dependent packages - 13 dependent repositories - 4.19 thousand downloads last month - 157 stars on GitHub - 6 maintainers
tedana 24.0.1
TE-Dependent Analysis (tedana) of multi-echo functional magnetic resonance imaging (fMRI) data.23 versions - Latest release: about 16 hours ago - 2 dependent packages - 13 dependent repositories - 4.19 thousand downloads last month - 157 stars on GitHub - 6 maintainers
Top 2.5% on pypi.org
115 versions - Latest release: about 1 month ago - 9 dependent packages - 18 dependent repositories - 4.1 thousand downloads last month - 805 stars on GitHub - 2 maintainers
fslpy 3.18.2
FSL Python library115 versions - Latest release: about 1 month ago - 9 dependent packages - 18 dependent repositories - 4.1 thousand downloads last month - 805 stars on GitHub - 2 maintainers
Top 3.9% on pypi.org
52 versions - Latest release: 6 months ago - 2 dependent packages - 15 dependent repositories - 3.55 thousand downloads last month - 687 stars on GitHub - 3 maintainers
braindecode 0.8.1
Deep learning software to decode EEG, ECG or MEG signals52 versions - Latest release: 6 months ago - 2 dependent packages - 15 dependent repositories - 3.55 thousand downloads last month - 687 stars on GitHub - 3 maintainers
Top 10.0% on pypi.org
41 versions - Latest release: about 22 hours ago - 2 dependent packages - 14 dependent repositories - 3.1 thousand downloads last month - 15 stars on GitHub - 2 maintainers
snakebids 0.13.1
BIDS integration into snakemake workflows41 versions - Latest release: about 22 hours ago - 2 dependent packages - 14 dependent repositories - 3.1 thousand downloads last month - 15 stars on GitHub - 2 maintainers
pvandyken-deprecated 0.0.4
Wrapper to manage deprecations4 versions - Latest release: 8 months ago - 1 dependent package - 1 dependent repositories - 3.09 thousand downloads last month - 15 stars on GitHub - 2 maintainers
Top 2.7% on pypi.org
37 versions - Latest release: almost 3 years ago - 16 dependent packages - 16 dependent repositories - 2.47 thousand downloads last month - 118 stars on GitHub - 7 maintainers
pydra 0.16.2
Pydra dataflow engine37 versions - Latest release: almost 3 years ago - 16 dependent packages - 16 dependent repositories - 2.47 thousand downloads last month - 118 stars on GitHub - 7 maintainers
Top 7.0% on pypi.org
4 versions - Latest release: almost 7 years ago - 1 dependent package - 9 dependent repositories - 2.46 thousand downloads last month - 18 stars on GitHub - 4 maintainers
pynv 0.1.1
A Python library for interfacing with http://neurovault.org upload API4 versions - Latest release: almost 7 years ago - 1 dependent package - 9 dependent repositories - 2.46 thousand downloads last month - 18 stars on GitHub - 4 maintainers
hedtools 0.4.0
HED validation, summary, and analysis tools.5 versions - Latest release: 7 months ago - 3 dependent repositories - 2.41 thousand downloads last month - 8 stars on GitHub - 3 maintainers
Top 4.6% on pypi.org
41 versions - Latest release: about 1 month ago - 2 dependent packages - 13 dependent repositories - 2.4 thousand downloads last month - 120 stars on GitHub - 4 maintainers
nltools 0.5.1
A Python package to analyze neuroimaging data41 versions - Latest release: about 1 month ago - 2 dependent packages - 13 dependent repositories - 2.4 thousand downloads last month - 120 stars on GitHub - 4 maintainers
Top 6.9% on pypi.org
10 versions - Latest release: about 1 month ago - 8 dependent repositories - 2.27 thousand downloads last month - 70 stars on GitHub - 4 maintainers
openmeeg 2.5.8
Forward problems solver in the field of EEG and MEG.10 versions - Latest release: about 1 month ago - 8 dependent repositories - 2.27 thousand downloads last month - 70 stars on GitHub - 4 maintainers
Top 8.7% on pypi.org
11 versions - Latest release: 7 months ago - 4 dependent repositories - 1.88 thousand downloads last month - 117 stars on GitHub - 4 maintainers
pyprep 0.4.3
A Python implementation of the preprocessing pipeline (PREP) for EEG data.11 versions - Latest release: 7 months ago - 4 dependent repositories - 1.88 thousand downloads last month - 117 stars on GitHub - 4 maintainers
Top 5.3% on pypi.org
167 versions - Latest release: 4 days ago - 1 dependent package - 9 dependent repositories - 1.7 thousand downloads last month - 607 stars on GitHub - 5 maintainers
fmriprep-docker 23.2.2
A wrapper for generating Docker commands using regular fMRIPrep syntax167 versions - Latest release: 4 days ago - 1 dependent package - 9 dependent repositories - 1.7 thousand downloads last month - 607 stars on GitHub - 5 maintainers
junifer 0.0.4
JUelich NeuroImaging FEature extractoR161 versions - Latest release: about 1 month ago - 1.67 thousand downloads last month - 11 stars on GitHub - 1 maintainer
mne-lsl 1.3.1
Real-time framework integrated with MNE-Python for online neuroscience research through LSL-compa...6 versions - Latest release: about 1 month ago - 1 dependent package - 1.3 thousand downloads last month - 47 stars on GitHub - 6 maintainers
medimages4tests 0.3.3
Generates dummy medical image data with realistic headers to be used in image handling tests6 versions - Latest release: 6 months ago - 8 dependent packages - 1 dependent repositories - 1.25 thousand downloads last month - 0 stars on GitHub - 1 maintainer
Top 7.8% on pypi.org
114 versions - Latest release: 23 days ago - 2 dependent repositories - 1.22 thousand downloads last month - 280 stars on GitHub - 10 maintainers
mriqc 24.0.0
Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and ...114 versions - Latest release: 23 days ago - 2 dependent repositories - 1.22 thousand downloads last month - 280 stars on GitHub - 10 maintainers
Top 5.3% on pypi.org
114 versions - Latest release: 2 days ago - 1 dependent package - 4 dependent repositories - 1.22 thousand downloads last month - 806 stars on GitHub - 2 maintainers
fsleyes 1.12.0
FSLeyes, the FSL image viewer114 versions - Latest release: 2 days ago - 1 dependent package - 4 dependent repositories - 1.22 thousand downloads last month - 806 stars on GitHub - 2 maintainers
Top 4.9% on pypi.org
42 versions - Latest release: 3 months ago - 5 dependent packages - 11 dependent repositories - 1.07 thousand downloads last month - 172 stars on GitHub - 4 maintainers
nimare 0.2.2
NiMARE: Neuroimaging Meta-Analysis Research Environment42 versions - Latest release: 3 months ago - 5 dependent packages - 11 dependent repositories - 1.07 thousand downloads last month - 172 stars on GitHub - 4 maintainers
Top 6.8% on pypi.org
24 versions - Latest release: 7 months ago - 7 dependent repositories - 1 thousand downloads last month - 147 stars on GitHub - 4 maintainers
dcm2bids 3.1.1
Reorganising NIfTI files from dcm2niix into the Brain Imaging Data Structure24 versions - Latest release: 7 months ago - 7 dependent repositories - 1 thousand downloads last month - 147 stars on GitHub - 4 maintainers
Top 7.1% on pypi.org
6 versions - Latest release: 10 months ago - 3 dependent packages - 2 dependent repositories - 770 downloads last month - 805 stars on GitHub - 4 maintainers
pydra-dcm2niix 1.2.1
Provides a task interface for the popular dcm2niix DICOM to NIfTI converter6 versions - Latest release: 10 months ago - 3 dependent packages - 2 dependent repositories - 770 downloads last month - 805 stars on GitHub - 4 maintainers
Top 9.7% on pypi.org
22 versions - Latest release: about 2 months ago - 2 dependent repositories - 696 downloads last month - 17 stars on GitHub - 6 maintainers
datalad-neuroimaging 0.3.5
DataLad extension package for neuro/medical imaging22 versions - Latest release: about 2 months ago - 2 dependent repositories - 696 downloads last month - 17 stars on GitHub - 6 maintainers
pystorm3 0.1.8
Python implementation of some Brainstorm functions9 versions - Latest release: 3 days ago - 658 downloads last month - 1 stars on GitHub - 2 maintainers
Top 6.6% on pypi.org
6 versions - Latest release: 3 months ago - 5 dependent packages - 10 dependent repositories - 624 downloads last month - 55 stars on GitHub - 5 maintainers
netneurotools 0.2.4
A toolbox for network neuroscience6 versions - Latest release: 3 months ago - 5 dependent packages - 10 dependent repositories - 624 downloads last month - 55 stars on GitHub - 5 maintainers
Top 8.1% on pypi.org
17 versions - Latest release: over 1 year ago - 1 dependent package - 4 dependent repositories - 558 downloads last month - 61 stars on GitHub - 4 maintainers
brainstat 0.4.2
A toolbox for statistical analysis of neuroimaging data17 versions - Latest release: over 1 year ago - 1 dependent package - 4 dependent repositories - 558 downloads last month - 61 stars on GitHub - 4 maintainers
Top 9.3% on pypi.org
38 versions - Latest release: 16 days ago - 1 dependent package - 1 dependent repositories - 515 downloads last month - 213 stars on GitHub - 4 maintainers
clinica 0.8.1
Software platform for clinical neuroimaging studies38 versions - Latest release: 16 days ago - 1 dependent package - 1 dependent repositories - 515 downloads last month - 213 stars on GitHub - 4 maintainers
Top 8.7% on pypi.org
34 versions - Latest release: about 1 month ago - 2 dependent repositories - 484 downloads last month - 117 stars on GitHub - 1 maintainer
bidscoin 4.3.2
Converts and organises raw MRI data-sets according to the Brain Imaging Data Structure (BIDS)34 versions - Latest release: about 1 month ago - 2 dependent repositories - 484 downloads last month - 117 stars on GitHub - 1 maintainer
pydra-fsl 0.0.22
Pydra tasks for FSL22 versions - Latest release: 8 months ago - 1 dependent package - 448 downloads last month - 3 stars on GitHub - 3 maintainers
pydra-freesurfer 0.0.11
Pydra tasks for FreeSurfer11 versions - Latest release: about 1 year ago - 1 dependent package - 1 dependent repositories - 445 downloads last month - 5 stars on GitHub - 3 maintainers
bids2table 0.1.0
Efficiently index large-scale BIDS datasets and derivatives3 versions - Latest release: 9 days ago - 1 dependent repositories - 410 downloads last month - 11 stars on GitHub - 2 maintainers
bsl 0.6.4
Real-time framework for online neuroscience research through LSL-compatible devices.15 versions - Latest release: 8 months ago - 394 downloads last month - 0 stars on GitHub - 2 maintainers
Top 5.6% on pypi.org
13 versions - Latest release: 14 days ago - 1 dependent package - 7 dependent repositories - 383 downloads last month - 556 stars on GitHub - 2 maintainers
pycortex 1.2.8
Python Cortical mapping software for fMRI data13 versions - Latest release: 14 days ago - 1 dependent package - 7 dependent repositories - 383 downloads last month - 556 stars on GitHub - 2 maintainers
deepsurfer 0.1.1a4
Learning-Based Utilities for Neuroimage Analysis6 versions - Latest release: 2 months ago - 381 downloads last month - 4 maintainers
mne-nirs 0.6.0
An MNE compatible package for processing near-infrared spectroscopy data.16 versions - Latest release: 6 months ago - 1 dependent repositories - 381 downloads last month - 72 stars on GitHub - 4 maintainers
roicat 1.1.38
A library for classifying and tracking ROIs.37 versions - Latest release: 28 days ago - 2 dependent repositories - 378 downloads last month - 9 stars on GitHub - 4 maintainers
neurocombat 0.2.12
ComBat algorithm for harmonizing multi-site imaging data15 versions - Latest release: almost 3 years ago - 1 dependent repositories - 374 downloads last month - 96 stars on GitHub - 2 maintainers
nigsp 0.19.0
A python library (and toolbox!) to run Graph Signal Processing on multimodal MRI data.32 versions - Latest release: 15 days ago - 1 dependent repositories - 372 downloads last month - 16 stars on GitHub - 1 maintainer
clinicadl 1.6.1
Framework for the reproducible processing of neuroimaging data with deep learning methods33 versions - Latest release: about 1 month ago - 1 dependent repositories - 368 downloads last month - 152 stars on GitHub - 4 maintainers
pyradigm 0.6.5
Python-based data structure to improve handling of datasets in machine learning workflows12 versions - Latest release: about 1 year ago - 2 dependent packages - 5 dependent repositories - 364 downloads last month - 26 stars on GitHub - 1 maintainer
hiwenet 0.4.5
Histogram-weighted Networks for Feature Extraction and Advance Analysis in Neuroscience7 versions - Latest release: almost 2 years ago - 1 dependent package - 1 dependent repositories - 326 downloads last month - 9 stars on GitHub - 1 maintainer
Top 9.9% on pypi.org
5 versions - Latest release: 3 months ago - 2 dependent packages - 1 dependent repositories - 307 downloads last month - 208 stars on GitHub - 5 maintainers
neuromaps 0.0.5
A toolbox for projecting, resampling, and comparing brain maps5 versions - Latest release: 3 months ago - 2 dependent packages - 1 dependent repositories - 307 downloads last month - 208 stars on GitHub - 5 maintainers
phys2cvr 0.18.3
Python library to generate regressors for and compute Cerebrovascular Reactivity and lag maps.44 versions - Latest release: 8 months ago - 1 dependent repositories - 305 downloads last month - 4 stars on GitHub - 2 maintainers
bidskit 2024.5.3 💰
BIDS curation toolkit29 versions - Latest release: 7 days ago - 1 dependent repositories - 302 downloads last month - 59 stars on GitHub - 1 maintainer
Top 7.1% on pypi.org
16 versions - Latest release: 11 months ago - 1 dependent package - 2 dependent repositories - 280 downloads last month - 295 stars on GitHub - 1 maintainer
intensity-normalization 2.2.4
normalize the intensities of various MR image modalities16 versions - Latest release: 11 months ago - 1 dependent package - 2 dependent repositories - 280 downloads last month - 295 stars on GitHub - 1 maintainer
visualqc 0.6.6
Assistive tool for the quality control of neuroimaging data30 versions - Latest release: about 1 year ago - 1 dependent package - 1 dependent repositories - 272 downloads last month - 72 stars on GitHub - 2 maintainers
pydra-bids 0.0.10
Pydra tasks for BIDS I/O10 versions - Latest release: over 1 year ago - 1 dependent package - 1 dependent repositories - 260 downloads last month - 2 stars on GitHub - 3 maintainers
brainweb 1.6.2 💰
BrainWeb-based multimodal models of 20 normal brains18 versions - Latest release: over 3 years ago - 1 dependent package - 3 dependent repositories - 245 downloads last month - 27 stars on GitHub - 2 maintainers
nitrain 0.3.0
Cloud-based framework for training and sharing medical imaging AI models4 versions - Latest release: 16 days ago - 240 downloads last month - 1,844 stars on GitHub - 2 maintainers
neurocombat-sklearn 0.1.3
Harmonizing neuroimaging data across sites. Implementation of neurocombat using sklearn format6 versions - Latest release: over 4 years ago - 1 dependent repositories - 239 downloads last month - 19 stars on GitHub - 2 maintainers
mrdataset 0.4.4
MRdataset7 versions - Latest release: 2 months ago - 1 dependent package - 1 dependent repositories - 235 downloads last month - 1 stars on GitHub - 1 maintainer
nibabies 23.1.0
Processing workflows for magnetic resonance images of the brain in infants25 versions - Latest release: 6 months ago - 1 dependent repositories - 224 downloads last month - 19 stars on GitHub - 3 maintainers
xnat4tests 0.3.10
Creates basic XNAT instance for API tests21 versions - Latest release: 6 months ago - 3 dependent packages - 1 dependent repositories - 222 downloads last month - 4 stars on GitHub - 1 maintainer
niutils 0.7.0
Various utilities to fast-track some boring python coding.12 versions - Latest release: 9 days ago - 1 dependent repositories - 218 downloads last month - 1 stars on GitHub - 2 maintainers
d2b 1.4.2
Organize data in the BIDS format21 versions - Latest release: over 1 year ago - 6 dependent repositories - 215 downloads last month - 0 stars on GitHub - 2 maintainers
brainextractor 0.2.2
brain extraction in python3 versions - Latest release: 12 months ago - 212 downloads last month - 30 stars on GitHub - 2 maintainers
clinica-pydra-ants 0.1.1
Pydra tasks for ANTs designed for Clinica2 versions - Latest release: 14 days ago - 210 downloads last month - 0 stars on GitHub - 2 maintainers
freesurfer-stats 1.2.1
Python Library to Read FreeSurfer's cortical parcellation anatomical statistics5 versions - Latest release: over 3 years ago - 1 dependent repositories - 192 downloads last month - 12 stars on GitHub - 2 maintainers
neurocaps 0.8.8
Co-activation patterns Python package8 versions - Latest release: about 2 months ago - 189 downloads last month - 0 stars on GitHub - 2 maintainers
compose-runner 0.4.6
A package for running neurosynth-compose analyses17 versions - Latest release: 3 months ago - 188 downloads last month - 0 stars on GitHub - 2 maintainers
pycivet 0.1.2
Object-oriented CIVET bindings for Python22 versions - Latest release: over 1 year ago - 1 dependent repositories - 187 downloads last month - 0 stars on GitHub - 2 maintainers
Top 7.2% on pypi.org
18 versions - Latest release: about 1 month ago - 1 dependent package - 4 dependent repositories - 185 downloads last month - 138 stars on GitHub - 6 maintainers
nobrainer 1.2.1
A framework for developing neural network models for 3D image processing.18 versions - Latest release: about 1 month ago - 1 dependent package - 4 dependent repositories - 185 downloads last month - 138 stars on GitHub - 6 maintainers
Top 9.6% on pypi.org
16 versions - Latest release: 5 months ago - 4 dependent repositories - 180 downloads last month - 31 stars on GitHub - 1 maintainer
bdpy 0.21.1
Brain decoder toolbox for Python16 versions - Latest release: 5 months ago - 4 dependent repositories - 180 downloads last month - 31 stars on GitHub - 1 maintainer
easylearn 0.1.20a0
This project is designed for machine learning in resting-state fMRI field17 versions - Latest release: over 3 years ago - 1 dependent repositories - 180 downloads last month - 35 stars on GitHub - 2 maintainers
deepbet 0.0.2
Fast brain extraction using neural networks2 versions - Latest release: 9 months ago - 1 dependent repositories - 176 downloads last month - 16 stars on GitHub - 2 maintainers
nibabies-wrapper 99.99.99
A wrapper for generating Docker and Apptainer/Singularity commands for simpler NiBabies usage26 versions - Latest release: over 2 years ago - 1 dependent repositories - 175 downloads last month - 19 stars on GitHub - 2 maintainers
frat-brain 1.6.5
Application for ROI fMRI data analysis.37 versions - Latest release: 8 days ago - 171 downloads last month - 11 stars on GitHub - 1 maintainer
graynet 0.5.6
Individualized single-subject networks from T1 mri features such as cortical thickness and gray m...21 versions - Latest release: about 1 year ago - 1 dependent repositories - 164 downloads last month - 34 stars on GitHub - 1 maintainer
clinica-pydra-freesurfer 0.1.0
Pydra tasks for FreeSurfer designed for Clinica1 version - Latest release: 10 days ago - 157 downloads last month - 5 stars on GitHub - 6 maintainers
brainlit 0.3.6
Code to process and analyze brainlit data11 versions - Latest release: 12 months ago - 1 dependent repositories - 157 downloads last month - 24 stars on GitHub - 2 maintainers
clinica-pydra-fsl 0.1.0
Pydra tasks for FSL designed for Clinica1 version - Latest release: 10 days ago - 156 downloads last month - 3 stars on GitHub - 5 maintainers
bcblib 0.3.4
32 versions - Latest release: about 1 year ago - 1 dependent repositories - 154 downloads last month - 2 stars on GitHub - 2 maintainersmrqa 0.2.4
rQA suite of tools offering automatic evaluation of protocol compliance10 versions - Latest release: 11 months ago - 154 downloads last month - 9 stars on GitHub - 1 maintainer
itk-skullstripping 0.1.0
Automatic skull-stripping for neuroimage analysis2 versions - Latest release: almost 3 years ago - 1 dependent repositories - 153 downloads last month - 11 stars on GitHub - 4 maintainers
airflow-imaging-plugins 2.4.3
Airflow plugins to support Neuroimaging tasks.43 versions - Latest release: over 6 years ago - 1 dependent repositories - 151 downloads last month - 15 stars on GitHub - 2 maintainers
pipetography 0.3.12
Pre/Post-processing pipeline for tractography wrapped around nipype and mrtrix319 versions - Latest release: over 2 years ago - 1 dependent repositories - 149 downloads last month - 4 stars on GitHub - 4 maintainers
rust-dtw 0.1.14
A rust implementation of dynamic time warping with python bindings!4 versions - Latest release: almost 3 years ago - 1 dependent repositories - 145 downloads last month - 21 stars on GitHub - 2 maintainers
neurograph 3.0.0
12 versions - Latest release: 2 months ago - 139 downloads last month - 2 maintainerspycrostates 0.5.0
A simple open source Python package for EEG microstate segmentation.8 versions - Latest release: 3 months ago - 139 downloads last month - 33 stars on GitHub - 4 maintainers
nii2png 0.3.0 💰
A lightweight neuroimaging .nii to .png converter2 versions - Latest release: almost 5 years ago - 1 dependent repositories - 135 downloads last month - 109 stars on GitHub - 2 maintainers
face-rhythm 0.2.5
A pipeline for analysis of facial behavior using optical flow10 versions - Latest release: 16 days ago - 134 downloads last month - 3 stars on GitHub - 2 maintainers
fslfeatsetup 0.4.8 removed
a small set of tools for create FSL FEAT .fsf configuration files15 versions - Latest release: almost 3 years ago - 1 dependent repositories - 130 downloads last month - 1 stars on GitHub - 2 maintainers
Top 9.3% on pypi.org
14 versions - Latest release: over 4 years ago - 5 dependent repositories - 130 downloads last month - 322 stars on GitHub - 8 maintainers
brainiak 0.9.1
Brain Imaging Analysis Kit14 versions - Latest release: over 4 years ago - 5 dependent repositories - 130 downloads last month - 322 stars on GitHub - 8 maintainers
pydfc 1.0.4
This package aims to provide a comprehensive framework for assessing dynamic functional connectiv...1 version - Latest release: about 2 months ago - 127 downloads last month - 4 maintainers
freesurfer-surface 2.0.0
Python Library to Read and Write Surface Files in Freesurfer's TriangularSurface Format10 versions - Latest release: almost 3 years ago - 3 dependent repositories - 122 downloads last month - 8 stars on GitHub - 2 maintainers
imaging-transcriptomics 1.1.11
A package to perform imaging transcriptomics analysis on a neuroimaging brain scan.16 versions - Latest release: over 1 year ago - 1 dependent repositories - 118 downloads last month - 14 stars on GitHub - 1 maintainer
bxl 0.3.4
Basic library for interacting with the REST interface of XNAT.10 versions - Latest release: almost 5 years ago - 114 downloads last month - 2 maintainers
bjdata 0.4.1
Binary JData and UBJSON encoder/decoder11 versions - Latest release: 7 months ago - 1 dependent repositories - 113 downloads last month - 1 stars on GitHub - 2 maintainers
mrivis 0.3.8
Intuitive high-level classes for visualization of medical imaging data13 versions - Latest release: about 1 year ago - 2 dependent packages - 2 dependent repositories - 100 downloads last month - 22 stars on GitHub - 2 maintainers
Related Keywords
neuroscience
74
python
66
fmri
37
mri
37
brain
36
bids
27
nifti
20
machine-learning
19
brain-imaging
16
eeg
15
statistics
12
fsl
12
dicom
11
meg
11
freesurfer
10
MRI
10
MEG
9
electroencephalography
9
medical-imaging
9
pydra
9
mri-images
9
machine learning
9
EEG
9
surface
8
research
7
nii
7
dcm2niix
7
visualization
7
bids-format
7
magnetoencephalography
7
deep-learning
7
python3
7
hacktoberfest
6
meta-analysis
6
nilearn
6
dcm
6
quality-control
6
cortex
6
BIDS
5
deep learning
5
registration
5
image-processing
5
pet
5
nifti-format
5
jpeg
5
dti
5
nitrc
5
fMRI
5
mricrogl
5
brainweb
5
dicom-images
5
electrocorticography
5
gz
5
jpeg-image
5
ants
4
scikit-learn
4
cli
4
segmentation
4
nipype
4
pytorch
4
fmri-preprocessing
4
workflows
4
neuroinformatics
4
nibabel
4
analysis
4
imaging
4
d2b
4
plugin
4
Neuroimaging
4
preprocessing
4
tool
4
skull-stripping
3
repository
3
parcellation
3
brain-networks
3
spm
3
slurm
3
grid
3
nipy
3
cluster
3
feature-extraction
3
data
3
brain-extraction
3
FSL
3
reader
3
brain-connectivity
3
combat
3
research-data-management
3
ECoG
3
deeplearning
3
vertex
3
science
3
mesh
3
anatomical-mri
3
ecog
3
voxel
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fmri-data-analysis
3
diffusion-mri
3
afni
3
DICOM
3