Ecosyste.ms: Packages

An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.

pypi.org "scipion" keyword

scipion-em-xmipp 22.7.0
Plugin to use Xmipp programs within the Scipion framework (see https://scipion-em.github.io/docs/).
51 versions - Latest release: almost 2 years ago - 3 dependent packages - 2 dependent repositories - 402 downloads last month - 11 stars on GitHub - 1 maintainer
scipion-em-phenix 3.2.1
PHENIX programs in Scipion. Warning: Install PHENIX v. 1-17
19 versions - Latest release: over 1 year ago - 1 dependent package - 1 dependent repositories - 101 downloads last month - 3 stars on GitHub - 1 maintainer
xmipp-metadata 1.0.14
Package to handle Xmipp Metadata and image binary data
14 versions - Latest release: 3 months ago - 1 dependent package - 1 dependent repositories - 109 downloads last month - 0 stars on GitHub - 1 maintainer
scipion-em-cistem 3.9.1
Plugin to use cisTEM programs within the Scipion framework
24 versions - Latest release: about 13 hours ago - 1 dependent repositories - 324 downloads last month - 1 stars on GitHub - 2 maintainers
scipion-em-reliontomo 3.4.0
Plugin to use Relion programs for tomography within the Scipion framework
15 versions - Latest release: about 2 months ago - 1 dependent package - 1 dependent repositories - 156 downloads last month - 1 stars on GitHub - 1 maintainer
scipion-em-tomo3d 3.1.2
tomo3d and other software at https://sites.google.com/site/3demimageprocessing/Home ready to use ...
3 versions - Latest release: 6 months ago - 1 dependent repositories - 61 downloads last month - 0 stars on GitHub - 1 maintainer
Top 8.9% on pypi.org
scipion-pyworkflow 3.6.0
Simple workflow platform used in scientific applications, initially developed within the Scipion ...
52 versions - Latest release: 1 day ago - 14 dependent packages - 22 dependent repositories - 494 downloads last month - 4 stars on GitHub - 2 maintainers
scipion-em-tomo 3.6.1
Plugin to use electron tomography software within the Scipion framework
32 versions - Latest release: about 2 months ago - 14 dependent packages - 13 dependent repositories - 382 downloads last month - 6 stars on GitHub - 1 maintainer
scipion-em-eman2 3.6.1
Plugin to use EMAN programs within the Scipion framework
21 versions - Latest release: 26 days ago - 1 dependent package - 1 dependent repositories - 256 downloads last month - 1 stars on GitHub - 3 maintainers
Top 8.1% on pypi.org
scipion-em 3.7.1
This modules contains classes related with EM
43 versions - Latest release: 1 day ago - 38 dependent packages - 70 dependent repositories - 951 downloads last month - 7 stars on GitHub - 2 maintainers
scipion-app 3.3.1
Scipion application. For processing cryo electron microscopy images and hybrid modelling
18 versions - Latest release: 2 months ago - 2 dependent packages - 1 dependent repositories - 180 downloads last month - 6 stars on GitHub - 1 maintainer
scipion-em-empiar 3.0.8
A Scipion plugin to make depositions to EMPIAR
15 versions - Latest release: about 2 years ago - 1 dependent repositories - 55 downloads last month - 1 stars on GitHub - 2 maintainers
scipion-em-facilities 3.0.5
Plugin for Cryo-EM facilities to be used within Scipion framework
9 versions - Latest release: 9 months ago - 1 dependent repositories - 75 downloads last month - 1 stars on GitHub - 1 maintainer
scipion-em-smartscope 3.0.1
Plugin to manage Smartscope from Scipion
3 versions - Latest release: 7 months ago - 23 downloads last month - 3 stars on GitHub - 1 maintainer
scipion-em-emready 3.0
EMReady: Improvement of cryo-EM maps by simultaneous local and non-local deep learning
1 version - Latest release: 11 months ago - 10 downloads last month - 0 stars on GitHub - 1 maintainer
scipion-em-kiharalab 1.0.1
Scipion plugin in order to use ther kiharalab software
6 versions - Latest release: 11 months ago - 27 downloads last month - 0 stars on GitHub - 1 maintainer
scipion-em-isonet 3.0.1
Scipion plugin isonet.
2 versions - Latest release: 3 months ago - 14 downloads last month - 20 stars on GitHub - 1 maintainer
scipionn-toolkit 1.0.4 removed
Xmipp neural network utilities for flexibility
2 versions - Latest release: about 1 year ago - 1 maintainer
scipion-em-embuild 1.0.4
EMBuild: Model building of protein complexes from intermediate-resolution cryo-EM maps with deep ...
5 versions - Latest release: about 1 year ago - 4 downloads last month - 1 maintainer
scipion-em-tomoviz 3.1.4
Tools for 3D visualization and manipulation of tomography data
5 versions - Latest release: 6 months ago - 2 dependent packages - 2 dependent repositories - 74 downloads last month - 0 stars on GitHub - 1 maintainer
scipion-em-warp 3.2.3
Plugin to use Warp within the Scipion framework
8 versions - Latest release: 27 days ago - 118 downloads last month - 0 stars on GitHub - 2 maintainers
scipion-em-susantomo 3.0b4
Plugin to use SUSAN within the Scipion framework
4 versions - Latest release: 3 months ago - 39 downloads last month - 2 stars on GitHub - 2 maintainers
scipion-em-prody 3.3.0
Scipion plugin for ProDy, the Bahar lab Python Package for Protein Dynamics Analysis
11 versions - Latest release: 9 months ago - 1 dependent repositories - 96 downloads last month - 3 stars on GitHub - 1 maintainer
scipion-installer 1.0.16
Installs scipion 3 creating a virtual environment for it, for now only for developers.
43 versions - Latest release: about 1 year ago - 1 dependent repositories - 226 downloads last month - 3 stars on GitHub - 1 maintainer
scipion-em-xmipptomo 3.1.2
Scipion plugin to deal with xmipp tomography protocols.
16 versions - Latest release: about 1 year ago - 1 dependent repositories - 178 downloads last month - 4 stars on GitHub - 1 maintainer
scipion-em-xmipp2 3.0.1
xmipp2 ready to use in scipion.
2 versions - Latest release: almost 3 years ago - 1 dependent repositories - 29 downloads last month - 0 stars on GitHub - 1 maintainer
scipion-em-topaz 3.0.2
Topaz ready to use in scipion.
5 versions - Latest release: about 1 year ago - 1 dependent repositories - 49 downloads last month - 0 stars on GitHub - 1 maintainer
scipion-em-xlmtools 1.0.0
Plugin to use xlmtools-Tools programs within the Scipion framework
1 version - Latest release: over 2 years ago - 1 dependent repositories - 9 downloads last month - 0 stars on GitHub - 1 maintainer
scipion-em-tomosegmemtv 3.1.2
Scipion plugin for softare packages tomosegmemTV and membraneAnnotator.
7 versions - Latest release: 4 months ago - 1 dependent repositories - 62 downloads last month - 2 stars on GitHub - 1 maintainer
scipion-em-sidesplitter 3.0.12
Plugin to use SIDESPLITTER program within the Scipion framework
13 versions - Latest release: 6 months ago - 1 dependent repositories - 64 downloads last month - 0 stars on GitHub - 2 maintainers
scipion-em-powerfit 2.0.3
Powerfit ready to use in Scipion.
12 versions - Latest release: over 4 years ago - 1 dependent repositories - 24 downloads last month - 0 stars on GitHub - 2 maintainers
scipion-em-spoc 1.0.6
Plugin to use SPOC programs within the Scipion framework
7 versions - Latest release: almost 2 years ago - 1 dependent repositories - 79 downloads last month - 1 stars on GitHub - 1 maintainer
scipion-em-spider 3.1.7
Plugin to use Spider programs within the Scipion framework
18 versions - Latest release: 6 months ago - 1 dependent repositories - 75 downloads last month - 0 stars on GitHub - 3 maintainers
scipion-em-sll 0.0.1
Scipion plugin for CryoEM tools developed at SciLifeLab
1 version - Latest release: almost 5 years ago - 1 dependent repositories - 10 downloads last month - 1 maintainer
scipion-em-simple 1.0.3
Plugin to use Simple programs within the Scipion framework
4 versions - Latest release: about 5 years ago - 1 dependent repositories - 12 downloads last month - 0 stars on GitHub - 2 maintainers
scipion-empiar-depositor 1.0.0a3
A Scipion plugin to make depositions to EMPIAR
3 versions - Latest release: almost 6 years ago - 1 dependent repositories - 3 downloads last month - 0 stars on GitHub - 1 maintainer
scipion-em-resmap 3.0.3
Plugin to use ResMap program within the Scipion framework
12 versions - Latest release: over 2 years ago - 1 dependent repositories - 45 downloads last month - 1 stars on GitHub - 2 maintainers
scipion-em-pwperformance 0.0.5
Python module to provide performance analysis tools and storage of the metrics for a further comp...
5 versions - Latest release: about 1 year ago - 1 dependent repositories - 15 downloads last month - 1 stars on GitHub - 1 maintainer
scipion-em-nysbc 1.0.3
Plugin to use NYSBC programs within the Scipion framework
4 versions - Latest release: almost 5 years ago - 1 dependent repositories - 15 downloads last month - 0 stars on GitHub - 2 maintainers
scipion-em-novactf 3.1.2
Plugin to use NovaCTF in Scipion
9 versions - Latest release: 6 months ago - 1 dependent repositories - 105 downloads last month - 1 stars on GitHub - 1 maintainer
scipion-em-motioncorr 3.16.1
Plugin to use motioncor programs within the Scipion framework
32 versions - Latest release: 3 months ago - 1 dependent repositories - 244 downloads last month - 1 stars on GitHub - 3 maintainers
scipion-em-ispyb 1.0.0
ISPyB monitor for scipion
2 versions - Latest release: about 5 years ago - 1 dependent repositories - 10 downloads last month - 0 stars on GitHub - 1 maintainer
scipion-em-locscale 3.0.5
Plugin to use Locscale program within the Scipion framework
14 versions - Latest release: over 1 year ago - 1 dependent repositories - 65 downloads last month - 0 stars on GitHub - 1 maintainer
scipion-em-imod 3.4.1
Plugin to use some of the Tomography tools from IMOD in Scipion
27 versions - Latest release: 3 months ago - 3 dependent packages - 2 dependent repositories - 82 downloads last month - 1 stars on GitHub - 1 maintainer
scipion-em-grigoriefflab 1.0.6
Grigoriefflab ready to use in scipion.
9 versions - Latest release: almost 5 years ago - 1 dependent repositories - 26 downloads last month - 0 stars on GitHub - 4 maintainers
scipion-em-gctf 3.1.3
Plugin to use Gctf program within the Scipion framework
21 versions - Latest release: 6 months ago - 1 dependent repositories - 126 downloads last month - 2 stars on GitHub - 3 maintainers
scipion-em-imagic 3.0.13
Plugin to use IMAGIC programs within the Scipion framework
15 versions - Latest release: 6 months ago - 1 dependent repositories - 64 downloads last month - 0 stars on GitHub - 3 maintainers
scipion-em-gautomatch 3.0.18
Plugin to use Gautomatch program within the Scipion framework
19 versions - Latest release: 6 months ago - 1 dependent repositories - 67 downloads last month - 2 stars on GitHub - 3 maintainers
scipion-em-emxlib 3.0.1
EMX_EXPORT ready to use in scipion.
8 versions - Latest release: over 3 years ago - 1 dependent repositories - 8 downloads last month - 0 stars on GitHub - 1 maintainer
scipion-em-fsc3d 3.2.1
Plugin to use 3DFSC within the Scipion framework
10 versions - Latest release: 6 months ago - 1 dependent repositories - 57 downloads last month - 0 stars on GitHub - 2 maintainers
scipion-em-esrf 1.0.2
Esrf's ISPyB monitor for Scipion
4 versions - Latest release: about 5 years ago - 1 dependent repositories - 4 downloads last month - 0 stars on GitHub - 1 maintainer
scipion-em-deepfinder 3.1.0
Deepfinder plugin for scipion.
2 versions - Latest release: 6 months ago - 1 dependent repositories - 27 downloads last month - 4 stars on GitHub - 1 maintainer
scipion-em-cryoef 3.0.15
Plugin to use Cryoef program within the Scipion framework
16 versions - Latest release: 6 months ago - 1 dependent repositories - 65 downloads last month - 0 stars on GitHub - 3 maintainers
scipion-em-cryodrgn 3.12.2
Plugin to use cryoDRGN within the Scipion framework
26 versions - Latest release: about 2 months ago - 1 dependent repositories - 48 downloads last month - 1 stars on GitHub - 2 maintainers
scipion-em-cryomethods 1.1.1
Plugin to use Cryomethods program within the Scipion framework
2 versions - Latest release: over 4 years ago - 1 dependent repositories - 5 downloads last month - 0 stars on GitHub - 1 maintainer
scipion-em-chimera 3.3.6
Plugin to use chimera programs within the Scipion framework
17 versions - Latest release: 10 months ago - 1 dependent package - 3 dependent repositories - 127 downloads last month - 1 stars on GitHub - 2 maintainers
scipion-em-ccp4 3.2.0
CCP4 model building programs in Scipion. Warning: Install CCP4 v. 7.0.56 or higher
25 versions - Latest release: 10 months ago - 1 dependent package - 1 dependent repositories - 48 downloads last month - 2 stars on GitHub - 1 maintainer
scipion-em-atsas 3.0.2
Plugin to use ATSAS programs within the Scipion framework
11 versions - Latest release: over 3 years ago - 1 dependent repositories - 17 downloads last month - 0 stars on GitHub - 1 maintainer
scipion-em-bamfordlab 3.0.0
Plugin to use Bamfordlab programs within the Scipion framework
7 versions - Latest release: almost 4 years ago - 1 dependent repositories - 5 downloads last month - 0 stars on GitHub - 1 maintainer
scipion-em-bionotes 0.1.2
Scipion 3DBionotes plugin.
1 version - Latest release: over 4 years ago - 1 dependent repositories - 8 downloads last month - 0 stars on GitHub - 1 maintainer
scipion-em-bsoft 3.0.6
Plugin to use Cryoef program within the Scipion framework
11 versions - Latest release: over 2 years ago - 1 dependent repositories - 53 downloads last month - 2 stars on GitHub - 1 maintainer
scipion-em-aretomo 3.9.0
Plugin to use AreTomo program within the Scipion framework
36 versions - Latest release: 2 months ago - 1 dependent repositories - 79 downloads last month - 1 stars on GitHub - 2 maintainers
scipion-em-atomstructutils 3.0.3
A Scipion plugin to manipulate atomic structure files (PDB/MMCIF)
8 versions - Latest release: over 3 years ago - 1 dependent repositories - 49 downloads last month - 0 stars on GitHub - 1 maintainer
scipion-em-appion 3.0.3
Plugin to use Appion Dogpicker within the Scipion framework
8 versions - Latest release: over 3 years ago - 1 dependent repositories - 25 downloads last month - 0 stars on GitHub - 1 maintainer
scipion-ed 3.0.1
Base pyworkflow plugin for Electron Diffraction image processing
10 versions - Latest release: about 3 years ago - 1 dependent repositories - 10 downloads last month - 4 stars on GitHub - 2 maintainers
scipion-ed-dials 3.0.1
Scipion-ED plugin to use programs from DIALS for Electron Diffraction image processing.
11 versions - Latest release: about 3 years ago - 1 dependent repositories - 40 downloads last month - 2 maintainers
scipion-em-modelangelo 3.1.1
Scipion plugin for modelangelo.
6 versions - Latest release: about 1 month ago - 66 downloads last month - 1 stars on GitHub - 1 maintainer
scipion-em-cryocare 4.1.0
Plugin to use cryoCARE inside scipion.
7 versions - Latest release: about 1 month ago - 1 dependent repositories - 74 downloads last month - 2 stars on GitHub - 1 maintainer
scipion-em-flexutils 3.1.6
Tools for 3D visualization and manipulation of flexibility data
6 versions - Latest release: about 1 month ago - 64 downloads last month - 0 stars on GitHub - 1 maintainer
scipion-em-xmippbase 23.11.0.0
Scipion pseudoplugin to deal with the shared xmipp protocols.
1 version - Latest release: 3 months ago - 23 downloads last month - 0 stars on GitHub - 1 maintainer
scipion-em-sphire 3.1.14
Plugin to use Sphire programs within the Scipion framework
36 versions - Latest release: 3 months ago - 1 dependent repositories - 182 downloads last month - 0 stars on GitHub - 2 maintainers
scipion-em-tomotwin 3.0.1
Plugin to use TomoTwin within the Scipion framework
10 versions - Latest release: about 1 year ago - 39 downloads last month - 1 stars on GitHub - 2 maintainers
scipion-em-emantomo 3.3.1
Plugin to use EMAN2 tomography programs within the Scipion framework
14 versions - Latest release: about 2 months ago - 1 dependent repositories - 161 downloads last month - 2 stars on GitHub - 1 maintainer
scipion-em-cryoassess 3.1.1
Plugin to use cryoassess within the Scipion framework
10 versions - Latest release: over 1 year ago - 1 dependent repositories - 63 downloads last month - 0 stars on GitHub - 2 maintainers
scipion-em-cryosparc2 4.1.0
Plugin to use cryoSPARC2 programs within the Scipion framework
82 versions - Latest release: 16 days ago - 1 dependent repositories - 353 downloads last month - 2 stars on GitHub - 1 maintainer
scipion-em-relion 4.0.20
Plugin to use Relion programs within the Scipion framework
61 versions - Latest release: 2 months ago - 4 dependent packages - 6 dependent repositories - 335 downloads last month - 3 stars on GitHub - 3 maintainers
scipion-em-pyseg 3.1.2
Scipion plugin for PySeg
11 versions - Latest release: 6 months ago - 1 dependent repositories - 32 downloads last month - 2 stars on GitHub - 1 maintainer
scipion-em-ucm 1.0
Scipion plugin with map validations
1 version - Latest release: about 2 years ago - 1 dependent repositories - 10 downloads last month - 0 stars on GitLab.com - 1 maintainer
Related Keywords
scipion-3.0 62 image-processing 42 cryo-em 38 structural-biology 38 electron-microscopy 37 imageprocessing 33 cryoem 30 spa 25 tomo 21 atom 6 scipion-2.0 5 other 4 science 4 tomography 3 subtomogram-averaging 3 cryo-tomography 3 core 3 workflows 3 empiar 2 pyworkflow 2 electron 2 continuous-heterogeneity 2 diffraction 2 scipion-1.2 2 xmipp 2 cryoet 2 viewer 1 pdb 1 scipion-3 1 modelling 1 modelangelo 1 fair 1 scientific-computing 1 workflow 1 tomagraphy 1 Xmipp 1 cryosparc 1 validation 1 annotations 1 3DBionotes 1 cryomethods 1 imod 1 novactf 1 scipion-2 1 prody-2.0 1 electron-tomography 1 embuild 1 EM 1 kiharalab 1 emready 1 smartscope 1 screening 1