Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
pypi.org "spatial-omics" keyword
sopa 1.0.12
Spatial-omics pipeline and analysis17 versions - Latest release: 8 days ago - 475 downloads last month - 71 stars on GitHub - 1 maintainer
napari-spatialdata 0.4.1
Interactive visualization of spatial omics data with napari14 versions - Latest release: about 2 months ago - 1 dependent package - 756 downloads last month - 33 stars on GitHub - 1 maintainer
spatialdata_xenium_explorer 0.1.7
Converting any SpatialData object into files that can be open by the Xenium Explorer6 versions - Latest release: about 1 month ago - 109 downloads last month - 9 stars on GitHub - 1 maintainer
nichecompass 0.1.2
End-to-end analysis of spatial multi-omics data3 versions - Latest release: 3 months ago - 50 downloads last month - 24 stars on GitHub - 1 maintainer
scslat 0.2.1
A graph deep learning based tool to align single cell spatial omics data2 versions - Latest release: about 1 year ago - 39 downloads last month - 56 stars on GitHub - 1 maintainer
spatialtis 0.5.0
Ultra-fast spatial analysis toolkit for large-scale spatial single-cell data11 versions - Latest release: almost 2 years ago - 1 dependent repositories - 86 downloads last month - 29 stars on GitHub - 1 maintainer
Related Keywords
spatial-analysis
3
single-cell
2
graph-neural-networks
2
deep-learning
2
visualization
2
spatialdata
2
spatial-transcriptomics
2
imaging-mass-cytometry
1
hotspot
1
multiplexed-ion-beam-imaging
1
network
1
heterogeneity
1
spaital-analysis
1
spatial-distribution
1
cell-cell-interaction
1
spatial-data
1
single-cell-analysis
1
tissue
1
graph-neural-network
1
bioinformatics
1
variational-autoencoder
1
10xgenomics
1
napari-plugin
1
napari
1
snakemake
1
pipeline
1
multiplexed-imaging
1
memory-management
1
generalization
1