Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
crates.io "biology" keyword
bdb 0.0.1
Efficient APIs to parse from and export to file formats commonly used in biology, for both proteo...1 version - Latest release: over 5 years ago - 837 downloads total - 1 stars on GitHub - 1 maintainer
ncbi 0.2.0-beta
Rust data structures for NCBI APIs2 versions - Latest release: 11 months ago - 702 downloads total - 1 stars on GitHub - 1 maintainer
jean_core 0.1.0
Core package of jean1 version - Latest release: over 1 year ago - 6 dependent packages - 1 dependent repositories - 2.05 thousand downloads total - 1 stars on GitHub - 1 maintainer
jean_io 0.1.0
I/O library feature for jean1 version - Latest release: over 1 year ago - 2 dependent packages - 1 dependent repositories - 911 downloads total - 1 stars on GitHub - 1 maintainer
jean_macros 0.1.0
Macro library feature for jean1 version - Latest release: over 1 year ago - 1 dependent repositories - 397 downloads total - 0 stars on GitHub - 1 maintainer
jean 0.1.0
Computational biology utility library for Rust featuring sequence alignment, genome annotation, a...1 version - Latest release: over 1 year ago - 1 dependent repositories - 415 downloads total - 0 stars on GitHub - 1 maintainer
ambigviz 0.1.0
Identify and plot ambiguous nucleotide bases at given positions from a BAM file.1 version - Latest release: about 1 month ago - 260 downloads total - 0 stars on GitHub - 1 maintainer
gb-io 0.7.1
A library for parsing, writing and manipulating Genbank sequence files8 versions - Latest release: about 2 years ago - 3 dependent packages - 1 dependent repositories - 21.8 thousand downloads total - 13 stars on GitHub - 1 maintainer
coprosize 1.0.4 💰
coprolite research (paleontology and archaeology): estimate the producer's body mass based on cop...16 versions - Latest release: over 1 year ago - 4.85 thousand downloads total - 7 stars on GitHub - 1 maintainer
exon 0.21.0 💰
A platform for scientific data processing and analysis.91 versions - Latest release: 13 days ago - 3 dependent packages - 1 dependent repositories - 32.5 thousand downloads total - 27 stars on GitHub - 1 maintainer
bel-format 0.1.0
A POC parser for the Biological Expression Language (BEL) format.1 version - Latest release: over 3 years ago - 546 downloads total - 1 stars on GitHub - 1 maintainer
protein-core 0.1.7
Working with protein structures8 versions - Latest release: over 3 years ago - 4 dependent packages - 2 dependent repositories - 6.45 thousand downloads total - 5 stars on GitHub - 1 maintainer
protein 0.0.5
Working with protein structures2 versions - Latest release: over 3 years ago - 1.22 thousand downloads total - 5 stars on GitHub - 1 maintainer
protein-analysis 0.0.1
Protein analysis1 version - Latest release: over 3 years ago - 1 dependent repositories - 715 downloads total - 5 stars on GitHub - 1 maintainer
exon-io 0.21.0 💰
IO utilities for Exon.57 versions - Latest release: 13 days ago - 1 dependent package - 20.7 thousand downloads total - 27 stars on GitHub - 1 maintainer
protein-io 0.0.1
Parsers for common protein structure file formats1 version - Latest release: over 3 years ago - 1 dependent repositories - 707 downloads total - 5 stars on GitHub - 1 maintainer
GetPDB 1.0.1
Download Protein files from rcsb.org3 versions - Latest release: over 4 years ago - 2.28 thousand downloads total - 0 stars on GitLab.com - 1 maintainer
protein-get 0.0.2
Working with protein structures2 versions - Latest release: over 3 years ago - 1 dependent repositories - 1.19 thousand downloads total - 5 stars on GitHub - 1 maintainer
numpress 1.1.0
A pure rust implementation of ms-numpress, a fast, minimally lossy compression algorithm for mass...11 versions - Latest release: over 5 years ago - 2 dependent packages - 1 dependent repositories - 9.2 thousand downloads total - 1 stars on GitHub - 1 maintainer
cellular_raza-core-proc-macro 0.0.8
Cellular simulation tool3 versions - Latest release: 3 months ago - 1 dependent package - 1 thousand downloads total - 3 stars on GitHub - 1 maintainer
cellular_raza-concepts-derive 0.0.8
Cellular simulation tool5 versions - Latest release: 3 months ago - 3 dependent packages - 1.88 thousand downloads total - 3 stars on GitHub - 1 maintainer
cellular_raza 0.0.8
Cellular simulation tool7 versions - Latest release: 3 months ago - 2.37 thousand downloads total - 3 stars on GitHub - 1 maintainer
cellular_raza-core-derive 0.0.5
Cellular simulation tool2 versions - Latest release: 6 months ago - 2 dependent packages - 898 downloads total - 3 stars on GitHub - 1 maintainer
cellular_raza-building-blocks 0.0.8
cellular_raza Building Blocks5 versions - Latest release: 3 months ago - 1 dependent package - 1.89 thousand downloads total - 3 stars on GitHub - 1 maintainer
cellular_raza-core 0.0.8
Cellular simulation tool5 versions - Latest release: 3 months ago - 2 dependent packages - 1.87 thousand downloads total - 3 stars on GitHub - 1 maintainer
cellular_raza-concepts 0.0.8
cellular_raza concepts6 versions - Latest release: 3 months ago - 4 dependent packages - 2.22 thousand downloads total - 3 stars on GitHub - 1 maintainer
li_stephens_py_hkhan 0.1.1
Python bindings of the li-stevens crate to allow calling the rust code from python2 versions - Latest release: almost 2 years ago - 650 downloads total - 0 stars on GitHub - 1 maintainer
nafcodec 0.2.0
Rust coder/decoder for Nucleotide Archive Format (NAF) files.3 versions - Latest release: about 2 months ago - 1 dependent package - 1.01 thousand downloads total - 3 stars on GitHub - 1 maintainer
nafcodec-py 0.2.0
PyO3 bindings and Python interface to the nafcodec crate.2 versions - Latest release: about 2 months ago - 547 downloads total - 3 stars on GitHub - 1 maintainer
ring_api 0.1.0
Strongly-typed client for the RING HTTP API1 version - Latest release: almost 5 years ago - 710 downloads total - 2 stars on GitHub - 1 maintainer
block-aligner 0.5.0
SIMD-accelerated library for computing global and X-drop affine gap penalty sequence-to-sequence ...10 versions - Latest release: 10 months ago - 2 dependent repositories - 4.65 thousand downloads total - 116 stars on GitHub - 1 maintainer
li-stephens 0.1.0
An implementation of the Li+Stephens model for predicting the likelihood of a test sequence given...1 version - Latest release: almost 2 years ago - 1 dependent package - 1 dependent repositories - 892 downloads total - 0 stars on GitHub - 1 maintainer
ebiotic 0.0.25
A Rust crate for interacting with common bioinformatics web services.7 versions - Latest release: 2 months ago - 2.21 thousand downloads total - 0 stars on GitHub - 1 maintainer
rust-sasa 0.2.2
RustSASA is a Rust library for computing the absolute solvent accessible surface area (ASA/SASA) ...5 versions - Latest release: 29 days ago - 1.25 thousand downloads total - 3 stars on GitHub - 1 maintainer
jean_cut 0.1.0
Codon usage tables feature for jean1 version - Latest release: over 1 year ago - 1 dependent package - 1 dependent repositories - 601 downloads total - 0 stars on GitHub - 1 maintainer
jean_blosum 0.1.0
BLOSUM feature for jean1 version - Latest release: over 1 year ago - 1 dependent package - 1 dependent repositories - 602 downloads total - 0 stars on GitHub - 1 maintainer
jean_alignment 0.1.0
Sequence alignment feature for jean1 version - Latest release: over 1 year ago - 1 dependent package - 1 dependent repositories - 590 downloads total - 0 stars on GitHub - 1 maintainer
Related Keywords
bioinformatics
24
rust
19
protein
13
genetics
10
dna
10
rust-library
9
science
9
computational-biology
8
agent-based
7
agent-based-modeling
7
simulation
7
genes
7
rna
7
cell
7
cellular
7
proteomics
4
arrow
2
datafusion
2
ngs
2
sql
2
genomics
2
archive
2
nucleotide
2
naf
2
nom-parser
2
ncbi
2
nucleotide-sequences
2
alignment
2
simd
1
edit-distance
1
string-distance
1
ring
1
algorithms
1
avx2
1
neon
1
wasm
1
webassembly
1
ebi
1
asynchronous
1
rust-crate
1
rust-lang
1
sasa
1
codons
1
cut
1
matrix
1
blosum
1
sequence
1
scientific
1
parser
1
asn1
1
ncbi-database
1
synthetic-biology
1
fasta
1
gff3
1
bam
1
visualization
1
genbank
1
paleontology
1
archaeology
1
bel
1
bio
1
compression
1
mass_spectrometry
1
mass-spectrometry
1
no-std
1
pythonbindings
1
interactome
1