Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
pypi.org "bids" keyword
batch22 0.1.2021.1.25.2
batch22 (b22)25 versions - Latest release: over 3 years ago - 157 downloads last month - 1 maintainer
bids2table 0.1.0
Efficiently index large-scale BIDS datasets and derivatives3 versions - Latest release: 19 days ago - 2 dependent packages - 1 dependent repositories - 410 downloads last month - 11 stars on GitHub - 1 maintainer
bidsarray 0.1.1
Snakemake + BIDS2 versions - Latest release: 11 days ago - 366 downloads last month - 15 stars on GitHub - 1 maintainer
Top 8.7% on pypi.org
34 versions - Latest release: about 2 months ago - 2 dependent repositories - 484 downloads last month - 117 stars on GitHub - 1 maintainer
bidscoin 4.3.2
Converts and organises raw MRI data-sets according to the Brain Imaging Data Structure (BIDS)34 versions - Latest release: about 2 months ago - 2 dependent repositories - 484 downloads last month - 117 stars on GitHub - 1 maintainer
bids-events 0.0.5
A package to export events to be used in BIDS datasets.4 versions - Latest release: over 5 years ago - 1 dependent repositories - 54 downloads last month - 0 stars on GitHub - 1 maintainer
bidsmreye 0.3.1
bids app using deepMReye to decode eye motion for fMRI time series data4 versions - Latest release: over 1 year ago - 37 downloads last month - 5 stars on GitHub - 1 maintainer
bidso 0.8
Transparent Object-Oriented Approach to BIDS in Python8 versions - Latest release: over 5 years ago - 2 dependent repositories - 32 downloads last month - 0 stars on GitHub - 1 maintainer
Top 6.7% on pypi.org
9 versions - Latest release: 2 months ago - 3 dependent packages - 1 dependent repositories - 33 thousand downloads last month - 252 stars on GitHub - 4 maintainers
bidsschematools 0.8.0
Python tools for working with the BIDS schema.9 versions - Latest release: 2 months ago - 3 dependent packages - 1 dependent repositories - 33 thousand downloads last month - 252 stars on GitHub - 4 maintainers
Top 2.7% on pypi.org
84 versions - Latest release: 11 days ago - 7 dependent packages - 87 dependent repositories - 32.9 thousand downloads last month - 177 stars on GitHub - 4 maintainers
bids-validator 1.14.6
Validator for the Brain Imaging Data Structure84 versions - Latest release: 11 days ago - 7 dependent packages - 87 dependent repositories - 32.9 thousand downloads last month - 177 stars on GitHub - 4 maintainers
boavus 0.4
Tools to analyze data structured as BIDS in Python2 versions - Latest release: over 5 years ago - 1 dependent repositories - 12 downloads last month - 0 stars on GitHub - 1 maintainer
brkraw 0.3.11
Bruker PvDataset Loader2 versions - Latest release: 11 months ago - 1 dependent repositories - 55 downloads last month - 35 stars on GitHub - 1 maintainer
bruker 0.3.7
Bruker PvDataset Loader34 versions - Latest release: almost 3 years ago - 1 dependent repositories - 291 downloads last month - 35 stars on GitHub - 1 maintainer
Top 9.3% on pypi.org
38 versions - Latest release: 25 days ago - 1 dependent package - 1 dependent repositories - 412 downloads last month - 214 stars on GitHub - 4 maintainers
clinica 0.8.1
Software platform for clinical neuroimaging studies38 versions - Latest release: 25 days ago - 1 dependent package - 1 dependent repositories - 412 downloads last month - 214 stars on GitHub - 4 maintainers
clinicadl 1.6.1
Framework for the reproducible processing of neuroimaging data with deep learning methods33 versions - Latest release: about 2 months ago - 1 dependent repositories - 221 downloads last month - 152 stars on GitHub - 4 maintainers
compile-dcm2bids-config 1.4.3 💰
Compile Dcm2Bids configuration files into a single config file.10 versions - Latest release: over 2 years ago - 1 dependent repositories - 9 downloads last month - 0 stars on GitHub - 1 maintainer
comp-validator 0.1.0
BIDS-validator for computational data (simulations).2 versions - Latest release: over 1 year ago - 9 downloads last month - 0 stars on GitHub - 1 maintainer
connectomemapper 3.1.0
Connectome Mapper 3: A Flexible and Open-Source Pipeline Software for Multiscale Multimodal Human...5 versions - Latest release: over 1 year ago - 1 dependent repositories - 56 downloads last month - 61 stars on GitHub - 1 maintainer
convert-source 0.1.1
Converts and organises source MR image data-sets in accordance with the Brain Imaging Data Struct...15 versions - Latest release: about 3 years ago - 1 dependent repositories - 199 downloads last month - 1 stars on GitHub - 1 maintainer
d2b 1.4.2
Organize data in the BIDS format21 versions - Latest release: almost 2 years ago - 6 dependent repositories - 215 downloads last month - 0 stars on GitHub - 1 maintainer
d2b-asl 2.0.0
Plugin for the d2b package to handle ASL data3 versions - Latest release: over 2 years ago - 1 dependent repositories - 23 downloads last month - 0 stars on GitHub - 1 maintainer
d2b-compile 1.1.0
compile-dcm2bids-config plugin for the d2b package2 versions - Latest release: over 2 years ago - 1 dependent repositories - 30 downloads last month - 0 stars on GitHub - 1 maintainer
d2b-dcm2niix 1.0.0
Dcm2niix plugin for the d2b package1 version - Latest release: over 2 years ago - 1 dependent repositories - 18 downloads last month - 0 stars on GitHub - 1 maintainer
d2b-nth-of-type 1.0.1
Plugin for the d2b package to deterministically uniquify different acquisition runs3 versions - Latest release: about 2 years ago - 1 dependent repositories - 15 downloads last month - 0 stars on GitHub - 1 maintainer
d2b-sidecarless-nii 1.0.0
Plugin for the d2b package to handle NIfTI images without sidecars1 version - Latest release: over 2 years ago - 1 dependent repositories - 18 downloads last month - 0 stars on GitHub - 1 maintainer
d2b-yaml 1.0.0
Plugin for the d2b package to YAML configuration files1 version - Latest release: over 2 years ago - 1 dependent repositories - 18 downloads last month - 0 stars on GitHub - 1 maintainer
Top 6.8% on pypi.org
24 versions - Latest release: 7 months ago - 7 dependent repositories - 3.07 thousand downloads last month - 147 stars on GitHub - 2 maintainers
dcm2bids 3.1.1
Reorganising NIfTI files from dcm2niix into the Brain Imaging Data Structure24 versions - Latest release: 7 months ago - 7 dependent repositories - 3.07 thousand downloads last month - 147 stars on GitHub - 2 maintainers
Top 4.4% on pypi.org
2 versions - Latest release: almost 2 years ago - 8 dependent packages - 3 dependent repositories - 5.89 thousand downloads last month - 811 stars on GitHub - 1 maintainer
dcm2niix 1.0.20220715
DCM2NIIX Python package2 versions - Latest release: almost 2 years ago - 8 dependent packages - 3 dependent repositories - 5.89 thousand downloads last month - 811 stars on GitHub - 1 maintainer
dmriprep 0.5.0
dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data.8 versions - Latest release: about 3 years ago - 1 dependent repositories - 100 downloads last month - 62 stars on GitHub - 2 maintainers
Top 4.6% on pypi.org
182 versions - Latest release: 14 days ago - 11 dependent repositories - 3.44 thousand downloads last month - 608 stars on GitHub - 5 maintainers
fmriprep 23.2.2
A robust and easy-to-use pipeline for preprocessing of diverse fMRI data182 versions - Latest release: 14 days ago - 11 dependent repositories - 3.44 thousand downloads last month - 608 stars on GitHub - 5 maintainers
Top 5.3% on pypi.org
168 versions - Latest release: 14 days ago - 1 dependent package - 9 dependent repositories - 1.5 thousand downloads last month - 608 stars on GitHub - 5 maintainers
fmriprep-docker 23.2.2
A wrapper for generating Docker commands using regular fMRIPrep syntax168 versions - Latest release: 14 days ago - 1 dependent package - 9 dependent repositories - 1.5 thousand downloads last month - 608 stars on GitHub - 5 maintainers
Top 3.4% on pypi.org
16 versions - Latest release: over 1 year ago - 11 dependent packages - 50 dependent repositories - 16.5 thousand downloads last month - 121 stars on GitHub - 3 maintainers
mne-bids 0.11.1
MNE-BIDS: Organizing MEG, EEG, and iEEG data according to the BIDS specification and facilitating...16 versions - Latest release: over 1 year ago - 11 dependent packages - 50 dependent repositories - 16.5 thousand downloads last month - 121 stars on GitHub - 3 maintainers
mne-bids-pipeline 1.8.0
A full-flegded processing pipeline for your MEG and EEG data13 versions - Latest release: 2 months ago - 1 dependent repositories - 181 downloads last month - 128 stars on GitHub - 2 maintainers
mne-hfo 0.2
MNE-HFO: Facilitates estimation/detection of high-frequency oscillationevents on iEEG data with M...2 versions - Latest release: almost 3 years ago - 1 dependent repositories - 18 downloads last month - 12 stars on GitHub - 2 maintainers
multiecho 0.29
Combine multi-echoes from a multi-echo fMRI acquisition.8 versions - Latest release: 9 months ago - 1 dependent package - 1 dependent repositories - 559 downloads last month - 6 stars on GitHub - 1 maintainer
nibetaseries 0.6.0
BetaSeries Correlations implemented in Nipype20 versions - Latest release: about 4 years ago - 1 dependent repositories - 180 downloads last month - 29 stars on GitHub - 1 maintainer
phys2bids 2.10.0
Python library to convert physiological data files into BIDS format27 versions - Latest release: about 1 year ago - 1 dependent package - 1 dependent repositories - 177 downloads last month - 56 stars on GitHub - 1 maintainer
physiopy 0.0.1b0
Metapackage for physiopy packages1 version - Latest release: over 4 years ago - 1 dependent repositories - 18 downloads last month - 56 stars on GitHub - 1 maintainer
psychopy_bids 2023.2.0
A PsychoPy plugin for using the Brain Imaging Data Structure (BIDS) to organize and describe data.8 versions - Latest release: 6 months ago - 60 downloads last month - 2 stars on GitLab.com - 1 maintainer
pvandyken-deprecated 0.0.4
Wrapper to manage deprecations4 versions - Latest release: 8 months ago - 1 dependent package - 1 dependent repositories - 3.09 thousand downloads last month - 15 stars on GitHub - 1 maintainer
Top 2.3% on pypi.org
48 versions - Latest release: 6 months ago - 46 dependent packages - 163 dependent repositories - 31.5 thousand downloads last month - 211 stars on GitHub - 3 maintainers
pybids 0.16.4
bids: interface with datasets conforming to BIDS48 versions - Latest release: 6 months ago - 46 dependent packages - 163 dependent repositories - 31.5 thousand downloads last month - 211 stars on GitHub - 3 maintainers
pybids-reports 0.1.0
pybids-reports: report generator for BIDS datasets1 version - Latest release: about 1 month ago - 145 downloads last month - 1 stars on GitHub - 1 maintainer
pydcm2niix 1.0.20220116
DCM2NIIX Python package2 versions - Latest release: over 2 years ago - 1 dependent repositories - 30 downloads last month - 811 stars on GitHub - 1 maintainer
pydra-bids 0.0.10
Pydra tasks for BIDS I/O10 versions - Latest release: over 1 year ago - 1 dependent package - 1 dependent repositories - 260 downloads last month - 2 stars on GitHub - 2 maintainers
pydra-dcm2bids 0.0.4
Pydra tasks for dcm2bids4 versions - Latest release: about 1 year ago - 42 downloads last month - 1 stars on GitHub - 1 maintainer
pymialsrtk 2.1.0
PyMIALSRTK: Nipype pipelines for the MIAL Super Resolution Toolkit4 versions - Latest release: over 1 year ago - 1 dependent repositories - 56 downloads last month - 24 stars on GitHub - 1 maintainer
pynipt 0.2.3
Python NeuroImaging Pipeline Tools9 versions - Latest release: almost 4 years ago - 1 dependent repositories - 25 downloads last month - 1 stars on GitHub - 1 maintainer
pypet2bids 1.3.9 💰
A python library for converting PET imaging and blood data to BIDS.39 versions - Latest release: 2 months ago - 1 dependent package - 1 dependent repositories - 330 downloads last month - 20 stars on GitHub - 1 maintainer
remodnav 1.1.2
robust eye movement detection for natural viewing8 versions - Latest release: about 1 year ago - 1 dependent package - 1 dependent repositories - 112 downloads last month - 50 stars on GitHub - 2 maintainers
rshrf 1.5.8
BIDs App to retrieve the haemodynamic response function from resting state fMRI data20 versions - Latest release: over 2 years ago - 1 dependent repositories - 162 downloads last month - 28 stars on GitHub - 2 maintainers
sanajeh 0.8
Simulate fMRI and iEEG data in BIDS format8 versions - Latest release: over 5 years ago - 1 dependent repositories - 21 downloads last month - 0 stars on GitHub - 1 maintainer
sim2bids 2.0.1
App to preprocess and convert simulation data40 versions - Latest release: over 1 year ago - 50 downloads last month - 3 stars on GitHub - 1 maintainer
Top 10.0% on pypi.org
41 versions - Latest release: 11 days ago - 4 dependent packages - 14 dependent repositories - 3.16 thousand downloads last month - 15 stars on GitHub - 1 maintainer
snakebids 0.13.1
BIDS integration into snakemake workflows41 versions - Latest release: 11 days ago - 4 dependent packages - 14 dependent repositories - 3.16 thousand downloads last month - 15 stars on GitHub - 1 maintainer
snirf2bids 0.7.8
To convert snirf file to bids format.36 versions - Latest release: 7 months ago - 1 dependent repositories - 140 downloads last month - 2 stars on GitHub - 3 maintainers
teneto 0.5.3
Temporal network tools24 versions - Latest release: over 3 years ago - 1 dependent package - 5 dependent repositories - 188 downloads last month - 84 stars on GitHub - 1 maintainer
Related Keywords
neuroimaging
28
neuroscience
16
python
14
mri
8
fmri
7
dicom
6
brain-imaging
5
nifti
5
BIDS
4
python3
4
d2b
4
plugin
4
dcm2niix
4
bids-apps
4
bidsapp
4
nibabel
3
closember
3
snakemake
3
converter
3
dcm2bids
3
brainweb
3
nii
3
bids-format
3
data-standards
3
tool
3
image processing
2
simpleitk
2
configuration
2
simulations
2
dataloader
2
administrator_tool
2
data_handler
2
bruker
2
computational data
2
config
2
eeg
2
pydra
2
brain
2
acqknowledge
2
hacktoberfest
2
mne-python
2
python3-library
2
physiology
2
labchart
2
physiological-signals
2
physiological-recordings
2
mri-images
2
jpeg-image
2
gz
2
dicom-images
2
imaging
2
par
2
rec
2
mricrogl
2
nitrc
2
nifti-format
2
dcm
2
image-processing
2
jpeg
2
data-sharing
2
research
2
ieeg
2
multi-echo
2
parrec
2
pet
2
brain imaging data structure
2
cli
2
conversion
2
mne
2
fmri-preprocessing
2
eye-tracking
2
meg
1
hfo-detection
1
pipeline
1
group-analysis
1
science
1
electroencephalography
1
magnetoencephalography
1
psychology
1
time-varying-connectivity
1
temporal-networks
1
temporal-network-theory
1
networks
1
network-theory
1
dynamics
1
community-detection
1
snirf
1
fnirs
1
computational-neuroscience
1
timeseries
1
fmri-data-analysis
1
metadata
1
json
1
python-neuroimage-pipeline
1
analysis
1
Tools
1
Pipeline
1
NeuroImaging
1
Python
1
workflow
1