Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
pypi.org "medical" keyword
imagedata-transport-s3 1.0.3
Imagedata transport plugin for S3/Minio storage2 versions - Latest release: 3 months ago - 7 downloads last month - 0 stars on GitHub - 1 maintainer
imaging-research 0.1.1
Medical Imaginging Research structuring and automation17 versions - Latest release: 22 days ago - 193 downloads last month - 0 stars on GitHub - 1 maintainer
mymi 0.0.1
Medical imaging code1 version - Latest release: over 3 years ago - 1 dependent repositories - 11 downloads last month - 0 stars on GitHub - 1 maintainer
fhir-tools 0.1.4
Toolbox for working with FHIR Resources and Types5 versions - Latest release: about 3 years ago - 1 dependent repositories - 79 downloads last month - 0 stars on GitHub - 1 maintainer
pylinac-qatrackplus 2.5.1
A toolkit for performing TG-142 QA-related tasks on a linear accelerator30 versions - Latest release: about 3 years ago - 1 dependent repositories - 153 downloads last month - 0 stars on GitHub - 1 maintainer
scikit-surgerytorch 0.2.6
scikit-surgerytorch is a Python package9 versions - Latest release: about 2 years ago - 1 dependent repositories - 143 downloads last month - 0 stars on GitHub - 1 maintainer
scikit-surgeryspeech 0.3.2
Interface to speech services for image-guided surgery.12 versions - Latest release: about 2 years ago - 1 dependent repositories - 58 downloads last month - 0 stars on GitHub - 2 maintainers
imagedata-format-ps 0.0.2
Imagedata format plugin for reading PostScript files2 versions - Latest release: over 2 years ago - 1 dependent repositories - 19 downloads last month - 0 stars on GitHub - 1 maintainer
hart-amsaf 0.0.4
The HART Lab Automated MRI Segmentation and Analysis Framework4 versions - Latest release: over 6 years ago - 1 dependent repositories - 39 downloads last month - 0 stars on GitHub - 1 maintainer
qirest-client 6.2.4
Quantitative Imaging Profile REST client6 versions - Latest release: about 7 years ago - 4 dependent repositories - 32 downloads last month - 0 stars on GitHub - 1 maintainer
scikit-surgeryfredbackend 0.0.6
FRED provides an interactive demonstration of fiducial based registration for teaching purposes1 version - Latest release: over 3 years ago - 1 dependent repositories - 18 downloads last month - 0 stars on GitHub - 1 maintainer
imagedata-format-biff 0.0.10
Imagedata format plugin for biff image data7 versions - Latest release: about 1 month ago - 1 dependent repositories - 126 downloads last month - 0 stars on GitHub - 1 maintainer
spydcmtk 1.1.6
Simple python dicom toolkit.9 versions - Latest release: about 2 months ago - 1 dependent package - 1 dependent repositories - 79 downloads last month - 0 stars on GitHub - 1 maintainer
scikit-surgerybk 0.3.5
Python package for interfacing with BK Ultrasound machines8 versions - Latest release: about 2 years ago - 1 dependent repositories - 90 downloads last month - 0 stars on GitHub - 2 maintainers
imshowtk 1.0.0
A lightweight replacement for openCV imshow using Tk2 versions - Latest release: about 1 year ago - 209 downloads last month - 0 stars on GitHub - 1 maintainer
scikit-surgeryarucotracker 1.0.3
scikit-surgeryarucotracker is a simple tracking interface using ARuCo markers22 versions - Latest release: about 1 year ago - 2 dependent packages - 7 dependent repositories - 195 downloads last month - 0 stars on GitHub - 2 maintainers
imagedata-registration 0.2.4
Image registration routines for Imagedata12 versions - Latest release: 2 months ago - 306 downloads last month - 0 stars on GitHub - 1 maintainer
ndjsontosvg 0.0.2
ndjsonTosvg to convert Google Quickdraw data set ndjson format to svg images2 versions - Latest release: over 2 years ago - 1 dependent repositories - 6 downloads last month - 0 stars on GitHub - 1 maintainer
torchgaussianfilter 0.0.2
Gaussian filtering using PyTorch1 version - Latest release: almost 2 years ago - 11 downloads last month - 0 stars on GitHub - 1 maintainer
sinkove 0.0.2
Library for interacting with Sinkove datasets1 version - Latest release: 11 months ago - 15 downloads last month - 0 stars on GitHub - 1 maintainer
scikit-surgery-evaluation 0.0.4
A python library for performing surgical skills evaluation4 versions - Latest release: about 2 years ago - 1 dependent repositories - 39 downloads last month - 0 stars on GitHub - 2 maintainers
frd-score 0.0.1
Package for calculating Fréchet Radiomics Distance (FRD)1 version - Latest release: 22 days ago - 79 downloads last month - 0 stars on GitHub - 1 maintainer
qirest 6.2.12
Quantitative Imaging Profile REST server13 versions - Latest release: about 7 years ago - 3 dependent repositories - 61 downloads last month - 0 stars on GitHub - 1 maintainer
scikit-surgeryimage 0.10.1
scikit-surgeryimage implements image processing tools and alogrithms for Image Guided Surgery.45 versions - Latest release: about 2 years ago - 3 dependent packages - 8 dependent repositories - 555 downloads last month - 1 stars on GitHub - 2 maintainers
vidi3d 1.3.3
Visualizes 3d/4d NumPy arrays using Matplotlib and PyQt5.12 versions - Latest release: 7 months ago - 2 dependent repositories - 87 downloads last month - 1 stars on GitHub - 1 maintainer
medipy 0.0.6
Code Collection for Medical Data Processing and Analysis1 version - Latest release: about 1 year ago - 23 downloads last month - 1 stars on GitHub - 1 maintainer
svs-dataset-downloader 0.0.3
Testing installation of Package3 versions - Latest release: about 1 year ago - 5 downloads last month - 1 stars on GitHub - 3 maintainers
tbccpylinac 3.1.1
A modified version of Pylinac made specifically for TBCC. Pylinac is a toolkit for performing TG-...11 versions - Latest release: over 3 years ago - 1 dependent repositories - 55 downloads last month - 1 stars on GitHub - 1 maintainer
scikit-surgerytf 0.2.1
scikit-surgerytf is a Python package for Tensor Flow examples and utilities3 versions - Latest release: about 2 years ago - 1 dependent repositories - 69 downloads last month - 1 stars on GitHub - 2 maintainers
medical-dl-utils 0.1.6 💰
Helpful utilities for deep learning in medical image analysis/medical image computing9 versions - Latest release: almost 2 years ago - 1 dependent repositories - 55 downloads last month - 1 stars on GitHub - 1 maintainer
arip 1.0.2
ARIP, software to quantify bacterial resistance to antibiotics by analysing picture of phenotypic...3 versions - Latest release: over 7 years ago - 1 dependent repositories - 54 downloads last month - 1 stars on GitHub - 1 maintainer
scikit-surgerytrackervisualisation 0.0.5
Provides a live visualisation of tracking data from a scikit-surgerytracker source5 versions - Latest release: about 2 years ago - 1 dependent repositories - 52 downloads last month - 1 stars on GitHub - 2 maintainers
medical-data 0.2.0 💰
Helpful data utilities for deep learning in medical image analysis/medical image computing2 versions - Latest release: about 1 year ago - 24 downloads last month - 1 stars on GitHub - 1 maintainer
python-rebase 0.3.3
Python implementation of the ReBase API12 versions - Latest release: 3 months ago - 53 downloads last month - 1 stars on GitHub - 1 maintainer
prostate-nomograms 0.0.9
Prediction tools based on existing prostate cancer nomograms.9 versions - Latest release: 11 months ago - 66 downloads last month - 1 stars on GitHub - 1 maintainer
glenoidplanefitting 0.0.3
implements a plane fitting algorithm to read a vtk polydata file and outputs fitted plane3 versions - Latest release: over 1 year ago - 1 dependent repositories - 32 downloads last month - 1 stars on GitHub - 1 maintainer
simpledicomtoolkit 1.4
Dicom Toolkit for reading dicom files to SimpleITK images4 versions - Latest release: over 5 years ago - 1 dependent repositories - 41 downloads last month - 1 stars on GitHub - 1 maintainer
wsipretoolkit 0.0.2
WSIPreToolkit is a python package that provides tools for enhancing medical images.1 version - Latest release: about 1 year ago - 13 downloads last month - 1 stars on GitHub - 3 maintainers
pydicom-ext 0.6.1
Additional functions for dicom data manipulation6 versions - Latest release: over 5 years ago - 2 dependent repositories - 120 downloads last month - 1 stars on GitHub - 1 maintainer
carepoint 0.1.7
This library will allow you to interact with CarePoint using Python.9 versions - Latest release: over 7 years ago - 92 downloads last month - 2 stars on GitHub - 1 maintainer
medimgproc 2.7.4
Medical Image Processing module for viewing and editing.123 versions - Latest release: almost 3 years ago - 1 dependent repositories - 383 downloads last month - 2 stars on GitHub - 2 maintainers
csg-dicoms-anonymizer 1.4.2
Robust and easy to use generic dicoms anonymizer with demographics csv spreadsheet anonymization ...2 versions - Latest release: over 6 years ago - 13 downloads last month - 2 stars on GitHub - 1 maintainer
torchhaarfeatures 0.0.2
Haar-like features using PyTorch1 version - Latest release: about 2 years ago - 1 dependent repositories - 38 downloads last month - 2 stars on GitHub - 1 maintainer
zensols.mimicsid 1.7.0
Use the MedSecId section annotations with MIMIC-III corpus parsing.12 versions - Latest release: 3 months ago - 1 dependent package - 92 downloads last month - 2 stars on GitHub - 1 maintainer
pubwords 1.0.7
19,000 unique words from all publically available PubMed abstracts for use in NLP and spell-check...5 versions - Latest release: about 2 years ago - 1 dependent repositories - 32 downloads last month - 2 stars on GitHub - 1 maintainer
mlx90632-driver 1.3.0
Python library for MLX9063212 versions - Latest release: over 3 years ago - 1 dependent repositories - 163 downloads last month - 2 stars on GitHub - 1 maintainer
rtdicomtools 1.0.1
My collection of Tools that extend the capabilities of current, widespread radiotherapy DICOM man...2 versions - Latest release: about 1 year ago - 15 downloads last month - 2 stars on GitHub - 1 maintainer
scikit-surgerysurfacematch 0.4.5
Tools for reconstructing and matching surfaces represented as point clouds.15 versions - Latest release: over 3 years ago - 1 dependent repositories - 74 downloads last month - 2 stars on GitHub - 2 maintainers
scikit-surgery-sphere-fitting 0.0.5
scikit-surgery-sphere-fitting implements a least squares sphere fitting algorithm, to read a vtk ...4 versions - Latest release: almost 3 years ago - 1 dependent repositories - 32 downloads last month - 2 stars on GitHub - 2 maintainers
dicomsorter 0.1.0a6
Python library for sorting DICOM images6 versions - Latest release: about 1 year ago - 1 dependent repositories - 82 downloads last month - 3 stars on GitHub - 1 maintainer
scikit-surgeryfred 0.1.5
FRED provides an interactive demonstration of fiducial based registration for teaching purposes15 versions - Latest release: over 2 years ago - 2 dependent repositories - 50 downloads last month - 3 stars on GitHub - 2 maintainers
medical-shape 0.1.2 💰
A torchio extension for shape processing8 versions - Latest release: almost 2 years ago - 1 dependent repositories - 55 downloads last month - 3 stars on GitHub - 1 maintainer
copyxnat 0.9.6
CopyXnat is a python utility for copying XNAT projects from one XNAT server to another65 versions - Latest release: almost 3 years ago - 1 dependent repositories - 98 downloads last month - 3 stars on GitHub - 1 maintainer
scikit-surgeryutils 2.0.0
scikit-surgeryutils - Tests/demos utilities, based around opencv-contrib-python-headless and PySide623 versions - Latest release: 11 months ago - 1 dependent package - 5 dependent repositories - 247 downloads last month - 3 stars on GitHub - 2 maintainers
bipl 0.5.8
Openslide/libtiff/GDAL ndarray-like interface and lazy parallel tile-based processing30 versions - Latest release: 8 days ago - 186 downloads last month - 3 stars on GitHub - 1 maintainer
i2t2 0.1.7
Suite of useful tools for manipulating medical images.19 versions - Latest release: over 3 years ago - 1 dependent repositories - 160 downloads last month - 3 stars on GitHub - 1 maintainer
medspellchecker 0.0.4 💰
Fast and effective spellchecker for Russian medical texts4 versions - Latest release: about 1 year ago - 35 downloads last month - 3 stars on GitHub - 1 maintainer
shape-image 0.0.1 💰
This is a super duper package1 version - Latest release: almost 3 years ago - 1 dependent repositories - 22 downloads last month - 3 stars on GitHub - 1 maintainer
fastdraw 1.2.1
Image segmentation algorithm using Fast Delineation by RAndom Walker2 versions - Latest release: over 6 years ago - 1 dependent repositories - 11 downloads last month - 4 stars on GitHub - 1 maintainer
pymuster 0.1.4
A registration tool for medical images5 versions - Latest release: 8 months ago - 29 downloads last month - 4 stars on GitHub - 1 maintainer
bodynavigation 0.3.5
Body navigation in CT images21 versions - Latest release: over 3 years ago - 1 dependent repositories - 60 downloads last month - 4 stars on GitHub - 1 maintainer
pydicomext 1.0.0
Python package that provides additional features to pydicom1 version - Latest release: about 3 years ago - 1 dependent repositories - 22 downloads last month - 5 stars on GitHub - 1 maintainer
aqua-io 0.1.0
Official Aqua.io API library client for Python1 version - Latest release: over 9 years ago - 2 dependent repositories - 17 downloads last month - 5 stars on GitHub - 1 maintainer
paddle-nnunet 1.0.0
nnUNet paddlepaddle version3 versions - Latest release: over 2 years ago - 1 dependent repositories - 8 downloads last month - 5 stars on GitHub - 1 maintainer
scikit-surgerybard 1.0.0
scikit-surgerybard is a Basic Augmented Reality Demo (BARD)based on scikit-surgery (SNAPPY)11 versions - Latest release: 11 months ago - 1 dependent repositories - 67 downloads last month - 6 stars on GitHub - 2 maintainers
bluebutton 0.3.0
The Blue Button Python Library3 versions - Latest release: about 9 years ago - 2 dependent repositories - 86 downloads last month - 6 stars on GitHub - 2 maintainers
medimage 1.0.7
Represent medical images as numpy array. Supported: .mhd (R/W),.xdr (R/W), dicom (R). Pure Python.8 versions - Latest release: over 4 years ago - 1 dependent repositories - 81 downloads last month - 6 stars on GitHub - 1 maintainer
scikit-surgerycore 0.7.2
scikit-surgerycore contains commonly used Image Guided Surgery algorithms and tools30 versions - Latest release: about 1 month ago - 4 dependent packages - 16 dependent repositories - 2.25 thousand downloads last month - 6 stars on GitHub - 2 maintainers
dicom-tools 0.9.1
Package for DICOM medical images analysis.10 versions - Latest release: over 6 years ago - 1 dependent repositories - 57 downloads last month - 6 stars on GitHub - 1 maintainer
heartfem 3.6.3
Optimization of patient specific heart model with myocardium FEM and cardiovascular network Windk...31 versions - Latest release: over 2 years ago - 1 dependent repositories - 225 downloads last month - 6 stars on GitHub - 1 maintainer
dicom3d 0.9.9
Library for reconstructing arbitrary defined 3D sectionsfrom volumetric medical scans1 version - Latest release: over 4 years ago - 1 dependent repositories - 19 downloads last month - 7 stars on GitHub - 1 maintainer
scikit-surgerycalibration 0.2.5
scikit-surgerycalibration provides algorithms designed for the calibration of surgical instruments26 versions - Latest release: about 1 month ago - 1 dependent package - 6 dependent repositories - 334 downloads last month - 7 stars on GitHub - 2 maintainers
pump3000 1.0 💰
Pump3000: A Graphical User Interface for controlling Cavro XP3000 pumps1 version - Latest release: 9 months ago - 1 dependent repositories - 8 stars on GitHub - 1 maintainer
dwilib 0.1.8.dev0
Research tools for MRI-based CAD of cancer10 versions - Latest release: over 5 years ago - 1 dependent repositories - 120 downloads last month - 8 stars on GitHub - 1 maintainer
zensols.mednlp 1.7.0
A natural language medical domain parsing library.15 versions - Latest release: about 1 month ago - 1 dependent package - 1 dependent repositories - 316 downloads last month - 9 stars on GitHub - 1 maintainer
py_bonemat_abaqus 1.0.9
Assign material properties of bone to a finite element mesh10 versions - Latest release: almost 8 years ago - 2 dependent repositories - 35 downloads last month - 9 stars on GitHub - 1 maintainer
imagedata 3.5.4
Read/write medical image data114 versions - Latest release: 28 days ago - 4 dependent packages - 2 dependent repositories - 819 downloads last month - 9 stars on GitHub - 1 maintainer
labelfusion 1.0.14
Label fusion strategies for multi-class labels.18 versions - Latest release: 11 months ago - 1 dependent repositories - 104 downloads last month - 10 stars on GitHub - 1 maintainer
pynetdicom2 0.9.7
pynetdicom2 is a pure python package implementing the DICOM network protocol8 versions - Latest release: about 2 years ago - 1 dependent repositories - 183 downloads last month - 10 stars on GitHub - 1 maintainer
medcv 1.0.0
OpenCV for medical image1 version - Latest release: about 3 years ago - 1 dependent repositories - 6 downloads last month - 10 stars on GitHub - 1 maintainer
bmdanalyse 0.2.0
Tool to analyse regional changes in a time series of 2D medical images.4 versions - Latest release: almost 8 years ago - 56 downloads last month - 12 stars on GitHub - 1 maintainer
delia 1.2.7
DICOM Extraction for Large-scale Image Analysis (DELIA).33 versions - Latest release: 5 months ago - 1 dependent package - 264 downloads last month - 12 stars on GitHub - 1 maintainer
python-daily-med 0.1.0b76
Interact with US NLM Daily Med API using Python.17 versions - Latest release: over 7 years ago - 1 dependent repositories - 72 downloads last month - 12 stars on GitHub - 1 maintainer
snappysonic 0.0.8
snappysonic provides an application to simulate an ultrasound probe moving over a body torso, it ...7 versions - Latest release: about 1 year ago - 1 dependent repositories - 64 downloads last month - 12 stars on GitHub - 2 maintainers
scikit-surgerytorsosimulator 0.0.1
scikit-surgerytorsosimulator has been superseded by snappysonic"2 versions - Latest release: almost 5 years ago - 1 dependent repositories - 38 downloads last month - 13 stars on GitHub - 2 maintainers
drug-named-entity-recognition 1.0.3
Drug Named Entity Recognition library to find and resolve drug names in a string (drug named enti...5 versions - Latest release: about 1 month ago - 11.6 thousand downloads last month - 14 stars on GitHub - 1 maintainer
fhir-kindling 1.0.3
Python library to simplify working with FHIR servers and resources.37 versions - Latest release: 8 months ago - 2 dependent packages - 2 dependent repositories - 288 downloads last month - 14 stars on GitHub - 1 maintainer
tschartslib 1.1
Python API for calling tscharts REST API2 versions - Latest release: over 2 years ago - 1 dependent repositories - 12 downloads last month - 17 stars on GitHub - 1 maintainer
ngff-zarr 0.8.1
A lean and kind Open Microscopy Environment (OME) Next Generation File Format (NGFF) Zarr impleme...24 versions - Latest release: 3 months ago - 2 dependent packages - 1 dependent repositories - 1.62 thousand downloads last month - 18 stars on GitHub - 1 maintainer
Top 9.5% on pypi.org
60 versions - Latest release: 3 months ago - 2 dependent packages - 7 dependent repositories - 590 downloads last month - 18 stars on GitHub - 2 maintainers
scikit-surgeryvtk 2.1.1
scikit-surgeryvtk implements VTK for Image Guided Surgery applications60 versions - Latest release: 3 months ago - 2 dependent packages - 7 dependent repositories - 590 downloads last month - 18 stars on GitHub - 2 maintainers
pyigtl 0.3.1
Python interface for OpenIGTLink4 versions - Latest release: over 1 year ago - 1 dependent repositories - 512 downloads last month - 24 stars on GitHub - 1 maintainer
fhir2dataset 0.1.6
Transform FHIR to Dataset16 versions - Latest release: about 3 years ago - 111 downloads last month - 25 stars on GitHub - 1 maintainer
imbdrl 2021.1.26.1
Imbalanced Classification with Deep Reinforcement Learning.5 versions - Latest release: over 3 years ago - 1 dependent repositories - 63 downloads last month - 25 stars on GitHub - 1 maintainer
med-imagetools 1.2.0
Med-Imagetools: Transparent and Reproducible Medical Image Processing Pipelines in Python26 versions - Latest release: 4 months ago - 2 dependent packages - 1 dependent repositories - 561 downloads last month - 26 stars on GitHub - 2 maintainers
slicerio 1.0.0
Utilities for 3D Slicer10 versions - Latest release: 14 days ago - 1 dependent repositories - 1.26 thousand downloads last month - 31 stars on GitHub - 1 maintainer
pyqaserver 2.0.1
A Bottle-based web interface between Pylinac and Orthanc.2 versions - Latest release: over 3 years ago - 1 dependent repositories - 29 downloads last month - 31 stars on GitHub - 1 maintainer
eds-scikit 0.1.7
eds-scikit is a Python library providing tools to10 versions - Latest release: about 1 month ago - 1 dependent repositories - 219 downloads last month - 31 stars on GitHub - 3 maintainers
mudicom 0.1.2
Read, validate, anonymize, and extract images from a DICOM file using GDCM11 versions - Latest release: over 8 years ago - 4 dependent repositories - 79 downloads last month - 33 stars on GitHub - 1 maintainer
Top 9.3% on pypi.org
30 versions - Latest release: 3 months ago - 1 dependent package - 4 dependent repositories - 552 downloads last month - 38 stars on GitHub - 2 maintainers
scikit-surgerynditracker 1.0.1
Interface for Northern Digital (NDI) Trackers with data to NumPy arrays30 versions - Latest release: 3 months ago - 1 dependent package - 4 dependent repositories - 552 downloads last month - 38 stars on GitHub - 2 maintainers
robust-deid 0.3.1
A package to remove private information (PHI/PII) from medical notes.5 versions - Latest release: 10 months ago - 1 dependent repositories - 173 downloads last month - 38 stars on GitHub - 2 maintainers
Related Keywords
python
76
imaging
57
hacktoberfest
29
emr
29
odoo
27
dicom
27
image
16
scikit-surgery
15
pytorch
15
deep-learning
14
medical-imaging
14
machine-learning
12
ucl
10
nlp
10
segmentation
9
deep learning
9
AI
9
healthcare
8
pydicom
7
3d
7
images
7
machine learning
7
processing
7
2d
6
physics
6
CT
6
mri
6
dataset
5
surgery
5
opencv-python
5
analysis
5
simpleitk
5
registration
4
itk
4
MRI
4
aruco
4
DICOM
4
image-processing
4
ai
4
medical-image-analysis
4
simulation
4
opencv
4
numpy
4
research
4
ct
4
medical-image-processing
3
orthanc
3
library
3
linac
3
image-classification
3
vtk-applications
3
assurance
3
quality
3
education
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ner
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fhir
3
health
3
cancer
3
biomedical
3
mhd
3
ultrasound
3
magnetic-resonance-imaging
3
medical-images
3
client
2
dicom-seg
2
drug
2
natural-language-processing
2
computer-vision
2
medicine
2
ehr
2
api
2
sensor
2
PET
2
tooling
2
reconstruction
2
vtk
2
bioinformatics
2
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2
svs
2
pathology
2
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2
scientific-papers
2
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2
augmentation
2
insight
2
tool
2
kit
2
US
2
graph
2
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2
max-flow
2
min-cut
2
4d
2
computed-tomography
2
feature-extraction
2
graph-cut
2
image-segmentation
2
medpy
2
mha
2
nifti-format
2