Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
pypi.org "variant-analysis" keyword
granite-suite 0.2.0
granite is a collection of software to call, filter and work with genomic variants.16 versions - Latest release: about 2 years ago - 1 dependent package - 1 dependent repositories - 88 downloads last month - 5 stars on GitHub - 2 maintainers
Top 3.0% on pypi.org
73 versions - Latest release: over 1 year ago - 7 dependent packages - 34 dependent repositories - 39.8 thousand downloads last month - 233 stars on GitHub - 2 maintainers
hgvs 1.5.4
HGVS Parser, Formatter, Mapper, Validator73 versions - Latest release: over 1 year ago - 7 dependent packages - 34 dependent repositories - 39.8 thousand downloads last month - 233 stars on GitHub - 2 maintainers
Top 4.6% on pypi.org
45 versions - Latest release: 4 months ago - 10 dependent packages - 21 dependent repositories - 64.7 thousand downloads last month - 39 stars on GitHub - 2 maintainers
biocommons.seqrepo 0.6.9
Non-redundant, compressed, journalled, file-based storage for biological sequences45 versions - Latest release: 4 months ago - 10 dependent packages - 21 dependent repositories - 64.7 thousand downloads last month - 39 stars on GitHub - 2 maintainers
seqrepo 0.0.0
alias for the biocommons.seqrepo package1 version - Latest release: almost 6 years ago - 1 dependent repositories - 128 downloads last month - 39 stars on GitHub - 1 maintainer
Top 5.6% on pypi.org
59 versions - Latest release: 11 months ago - 6 dependent packages - 28 dependent repositories - 91.3 thousand downloads last month - 18 stars on GitHub - 2 maintainers
bioutils 0.5.8
miscellaneous simple bioinformatics utilities and lookup tables59 versions - Latest release: 11 months ago - 6 dependent packages - 28 dependent repositories - 91.3 thousand downloads last month - 18 stars on GitHub - 2 maintainers
open-cravat-multiuser 2.5.0
OpenCRAVAT Multiuser Addon11 versions - Latest release: 4 months ago - 1 dependent repositories - 47 downloads last month - 108 stars on GitHub - 1 maintainer
seqrepo-rest-service 0.2.2
SeqRepo REST Service2 versions - Latest release: 7 months ago - 16 downloads last month - 4 stars on GitHub - 1 maintainer
variant-extractor 4.0.6
Deterministic and standard extractor of indels, SNVs and structural variants (SVs) from VCF files6 versions - Latest release: over 1 year ago - 1 dependent package - 27 downloads last month - 3 stars on GitHub - 1 maintainer
gnomad-db 0.1.4
This package scales the huge gnomAD files to a SQLite database, which is easy and fast to query. ...13 versions - Latest release: 7 months ago - 1 dependent repositories - 167 downloads last month - 27 stars on GitHub - 1 maintainer
virheat 0.5.4
virHEAT creates a heatmap from vcf files and maps positions on to a reference genome.11 versions - Latest release: 8 months ago - 130 downloads last month - 10 stars on GitHub - 1 maintainer
Related Keywords
bioinformatics
7
genomics
6
sequencing
5
genome-analysis
5
variation
5
genetics
2
snv
2
vcf
2
biocommons
2
python3
1
variant-annotation
1
variant-annotations
1
variant
1
indel
1
sv
1
variant-calling
1
annotation
1
database
1
gnomad
1
rare-variant-analysis
1
genome-visualization
1
heatmap
1
pypi-package
1
snps
1
vcf-files
1
viral-genomics
1
compound-heterozygous
1
de-novo-mutation
1
de-novo-mutations
1
single-nucleotide-variation
1
snvs
1
trio
1
variant-filtration
1
variants
1
computational biology
1
genome variation
1
hgvs
1
HGVS
1
annotation-tool
1
bioinformatics-pipeline
1
bioinformatics-tool
1
genomic-data-analysis
1
javascript
1
python
1