Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
pypi.org "variation" keyword
vcf-kit 0.2.9
Assorted utilities for the variant call format16 versions - Latest release: over 3 years ago - 1 dependent repositories - 346 downloads last month - 119 stars on GitHub - 1 maintainer
svim 2.0.0
A structural variant caller for long reads.19 versions - Latest release: almost 3 years ago - 1 dependent repositories - 312 downloads last month - 142 stars on GitHub - 1 maintainer
ga4gh.vrsatile.pydantic 0.2.0
"Translation of the GA4GH VRS and VRSATILE Schemas to a Pydantic data model"24 versions - Latest release: 8 months ago - 7 dependent packages - 10 dependent repositories - 197 downloads last month - 0 stars on GitHub - 3 maintainers
Top 3.0% on pypi.org
73 versions - Latest release: over 1 year ago - 7 dependent packages - 34 dependent repositories - 39.8 thousand downloads last month - 233 stars on GitHub - 2 maintainers
hgvs 1.5.4
HGVS Parser, Formatter, Mapper, Validator73 versions - Latest release: over 1 year ago - 7 dependent packages - 34 dependent repositories - 39.8 thousand downloads last month - 233 stars on GitHub - 2 maintainers
Top 4.6% on pypi.org
45 versions - Latest release: 4 months ago - 10 dependent packages - 21 dependent repositories - 64.7 thousand downloads last month - 39 stars on GitHub - 2 maintainers
biocommons.seqrepo 0.6.9
Non-redundant, compressed, journalled, file-based storage for biological sequences45 versions - Latest release: 4 months ago - 10 dependent packages - 21 dependent repositories - 64.7 thousand downloads last month - 39 stars on GitHub - 2 maintainers
seqrepo 0.0.0
alias for the biocommons.seqrepo package1 version - Latest release: almost 6 years ago - 1 dependent repositories - 128 downloads last month - 39 stars on GitHub - 1 maintainer
Top 5.6% on pypi.org
59 versions - Latest release: 11 months ago - 6 dependent packages - 28 dependent repositories - 91.3 thousand downloads last month - 18 stars on GitHub - 2 maintainers
bioutils 0.5.8
miscellaneous simple bioinformatics utilities and lookup tables59 versions - Latest release: 11 months ago - 6 dependent packages - 28 dependent repositories - 91.3 thousand downloads last month - 18 stars on GitHub - 2 maintainers
Top 5.3% on pypi.org
52 versions - Latest release: 7 months ago - 7 dependent packages - 10 dependent repositories - 5.37 thousand downloads last month - 46 stars on GitHub - 7 maintainers
ga4gh.vrs 0.8.5
"GA4GH Variation Representation Specification (VRS) reference implementation (https://github.com/...52 versions - Latest release: 7 months ago - 7 dependent packages - 10 dependent repositories - 5.37 thousand downloads last month - 46 stars on GitHub - 7 maintainers
histra 1.2
Spectral translocation detection of HiC matrices.3 versions - Latest release: over 1 year ago - 1 dependent repositories - 9 downloads last month - 0 stars on GitHub - 1 maintainer
svim-asm 1.0.3
A structural variant caller for genome-genome alignments.3 versions - Latest release: over 1 year ago - 1 dependent package - 1 dependent repositories - 29 downloads last month - 80 stars on GitHub - 1 maintainer
prox-tv-sdist 3.3.1
Toolbox for fast Total Variation proximity operators2 versions - Latest release: over 2 years ago - 1 dependent repositories - 37 downloads last month - 210 stars on GitHub - 1 maintainer
Top 7.8% on pypi.org
9 versions - Latest release: over 5 years ago - 5 dependent repositories - 189 downloads last month - 209 stars on GitHub - 1 maintainer
prox_tv 3.3.0
Toolbox for fast Total Variation proximity operators9 versions - Latest release: over 5 years ago - 5 dependent repositories - 189 downloads last month - 209 stars on GitHub - 1 maintainer
numberwrangler 0.0.2
Python package for slightly or massively variating numbers.3 versions - Latest release: 11 months ago - 11 downloads last month - 3 stars on GitHub - 1 maintainer
msda 1.10.0
MSDA - An open source, low-code time-series multi-sensor data analysis, unsupervised feature sele...11 versions - Latest release: over 3 years ago - 1 dependent repositories - 56 downloads last month - 115 stars on GitHub - 1 maintainer
seqrepo-rest-service 0.2.2
SeqRepo REST Service2 versions - Latest release: 7 months ago - 16 downloads last month - 4 stars on GitHub - 1 maintainer
Top 5.8% on pypi.org
2 versions - Latest release: over 9 years ago - 1 dependent package - 25 dependent repositories - 1.61 thousand downloads last month - 44 stars on GitHub - 1 maintainer
geomag 0.9.2015
Magnetic variation/declination2 versions - Latest release: over 9 years ago - 1 dependent package - 25 dependent repositories - 1.61 thousand downloads last month - 44 stars on GitHub - 1 maintainer
mkdocs-tex2svg 0.1.1
Converts (inline and/or block) LaTeX snippets in Mkdocs, as base64 SVGs, natively & dynamically c...15 versions - Latest release: over 1 year ago - 146 downloads last month - 0 stars on GitLab.com - 1 maintainer
vcfy 0.0.9
Generate VCF file with random variants from reference genome9 versions - Latest release: about 3 years ago - 1 dependent repositories - 109 downloads last month - 6 stars on GitHub - 1 maintainer
Related Keywords
genomics
8
bioinformatics
7
genome-analysis
5
sequencing
5
variant-analysis
5
python
4
signal-processing
3
caller
3
hgvs
3
biocommons
2
proximal-operators
2
optimization-algorithms
2
genome
2
machine-learning
2
learning
2
machine
2
processing
2
total
2
image
2
spdi
2
ga4gh
2
structural
2
SV
2
vcf
2
tabular-data
1
sensor-data
1
sensor
1
pytorch
1
multisensor
1
multidimensional-data
1
feature-selection
1
feature-engineering
1
explainable-artificial-intelligence
1
time-series
1
visualization
1
magnetic
1
declination
1
mkdocs
1
markdown
1
tex
1
latex
1
mathematics
1
table
1
svg
1
DNA
1
sequence
1
ngs
1
variant-simulation
1
vcf-files
1
VCF
1
variant
1
format
1
snps
1
genetic
1
genetics
1
svim
1
PacBio
1
computational biology
1
genome variation
1
HGVS
1
HiC
1
structure
1
translocation
1
svim-asm
1
assembly
1
math
1
package
1
random
1
anamoly-detection-using-graphs
1
anomaly-detection
1
correlation
1
data-analysis
1
deep-learning
1
deep-neural-networks
1