Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
pypi.org "metagenomic" keyword
metawibele 0.4.7
MetaWIBELE: Workflow to Identify novel Bioactive Elements in microbiome10 versions - Latest release: 9 months ago - 1 dependent repositories - 43 downloads last month - 18 stars on GitHub - 1 maintainer
kneaddata 0.12.0
13 versions - Latest release: over 1 year ago - 1 dependent repositories - 229 downloads last month - 1 maintainerhumann 3.6.1
HUMAnN: The HMP Unified Metabolic Analysis Network, version 315 versions - Latest release: about 1 year ago - 1 dependent repositories - 857 downloads last month - 1 maintainer
shortbred 0.9.5
ShortBRED: a system for profiling protein families of interest at very high specificity in shotgu...1 version - Latest release: almost 4 years ago - 1 dependent repositories - 14 downloads last month - 1 maintainer
humann2 2.8.2
HUMAnN2: The HMP Unified Metabolic Analysis Network 225 versions - Latest release: about 4 years ago - 6 dependent repositories - 162 downloads last month - 1 maintainer
parathaa 0.1.0
PARATHAA: Preserving and Assimilating Region-specific Ambiguities in Taxonomic Hierarchical Assig...1 version - Latest release: 6 months ago - 20 downloads last month - 1 stars on GitHub - 1 maintainer
torchmetagen 0.1.8
Torchmetagen is a python package for metagenomic sequence data processing and inference.3 versions - Latest release: about 3 years ago - 1 dependent repositories - 11 downloads last month - 0 stars on GitHub - 1 maintainer
mbin 1.1.1
mBin: a methylation-based binning framework for metagenomic SMRT sequencing reads3 versions - Latest release: about 6 years ago - 1 dependent repositories - 23 downloads last month - 25 stars on GitHub - 1 maintainer
ccmetagen 1.5.0
Microbiome classification pipeline10 versions - Latest release: about 2 months ago - 1 dependent repositories - 170 downloads last month - 58 stars on GitHub - 3 maintainers
biobakery-workflows 0.15.1
bioBakery workflows: A collection of meta'omic analysis workflows24 versions - Latest release: almost 4 years ago - 101 downloads last month - 1 maintainer
Related Keywords
bioinformatics
8
microbial
7
microbiome
7
microbiology
7
metatranscriptomic
5
humann
3
anadama2
3
KMA
1
classifier
1
metaphlan
1
taxonomy
1
binning
1
sequencing
1
methylation
1
mbin
1
viral classification
1
strainphlan
1
deep learning
1
baqlava
1
humann2
1
shortbred
1
kneaddata
1
tools
1
python
1
public
1
biobakery
1
archived
1
metawibele
1
assembly
1
bioactive
1
gene catalog
1