Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
pypi.org "snv" keyword
variant-extractor 4.0.6
Deterministic and standard extractor of indels, SNVs and structural variants (SVs) from VCF files6 versions - Latest release: about 1 year ago - 1 dependent package - 27 downloads last month - 3 stars on GitHub - 1 maintainer
germlinefilter 1.2
Encrypted filtering of germline calls from a somatic vcf.1 version - Latest release: over 9 years ago - 1 dependent repositories - 22 downloads last month - 1 maintainer
tcgadnloader 0.1.5
TCGA hg19 and hg38 data downloader.6 versions - Latest release: over 3 years ago - 1 dependent repositories - 43 downloads last month - 4 stars on GitHub - 1 maintainer
mtbparser 0.2.7
A module that parses different diagnostic variant data.7 versions - Latest release: over 6 years ago - 1 dependent repositories - 37 downloads last month - 0 stars on GitHub - 1 maintainer
granite-suite 0.2.0
granite is a collection of software to call, filter and work with genomic variants.16 versions - Latest release: about 2 years ago - 1 dependent package - 1 dependent repositories - 161 downloads last month - 5 stars on GitHub - 2 maintainers
cfdnapipe 1.0.4
An Intergrated Pipeline For cfDNA Sequencing Data Analysis12 versions - Latest release: over 2 years ago - 1 dependent repositories - 41 downloads last month - 55 stars on GitHub - 1 maintainer
Related Keywords
cnv
3
variant-analysis
2
vcf
2
de-novo-mutations
1
single-nucleotide-variation
1
snvs
1
trio
1
variant-filtration
1
variants
1
cell free DNA
1
WGS
1
WGBS
1
Fragmentation
1
Methylation
1
Virus
1
SNV
1
CNV
1
wgs-data
1
cell-free-dna
1
cfdna
1
virus-detection
1
wgbs-data
1
genetics
1
bioinformatics
1
variant
1
indel
1
sv
1
variant-calling
1
germline
1
somatic
1
single nucleotide variant
1
hg19
1
hg38
1
rna-seq
1
tcga-data
1
other
1
parser
1
python
1
tumor
1
compound-heterozygous
1
de-novo-mutation
1