pypi.org "variant-analysis" keyword
View the packages on the pypi.org package registry that are tagged with the "variant-analysis" keyword.
Top 3.0% on pypi.org
78 versions - Latest release: 3 days ago - 7 dependent packages - 34 dependent repositories - 48.6 thousand downloads last month - 274 stars on GitHub - 3 maintainers
hgvs 1.5.6
HGVS Parser, Formatter, Mapper, Validator78 versions - Latest release: 3 days ago - 7 dependent packages - 34 dependent repositories - 48.6 thousand downloads last month - 274 stars on GitHub - 3 maintainers
vcfx 1.0.3
Python bindings for the VCFX toolkit - comprehensive VCF manipulation and analysis2 versions - Latest release: 3 months ago - 10 downloads last month - 1 stars on GitHub - 1 maintainer
seqrepo 0.0.0
alias for the biocommons.seqrepo package1 version - Latest release: about 7 years ago - 1 dependent repositories - 558 downloads last month - 42 stars on GitHub - 1 maintainer
Top 4.6% on pypi.org
48 versions - Latest release: 6 months ago - 10 dependent packages - 21 dependent repositories - 52.1 thousand downloads last month - 42 stars on GitHub - 3 maintainers
biocommons.seqrepo 0.6.11
Non-redundant, compressed, journalled, file-based storage for biological sequences48 versions - Latest release: 6 months ago - 10 dependent packages - 21 dependent repositories - 52.1 thousand downloads last month - 42 stars on GitHub - 3 maintainers
g2papi 1.0.4
A python client and CLI for easy access to G2P portal APIs5 versions - Latest release: over 1 year ago - 17 downloads last month - 12 stars on GitHub - 1 maintainer
varseek 0.1.1
Efficient variant screening of RNA-seq and DNA-seq data using k-mer-based alignment against a ref...3 versions - Latest release: 27 days ago - 210 downloads last month - 6 stars on GitHub - 1 maintainer
embedpvp 1.0.5
EmbedPVP: Integration of Genomics and Phenotypes for Variant Prioritization using Deep Learning4 versions - Latest release: over 1 year ago - 7 downloads last month - 5 stars on GitHub - 1 maintainer
variant-extractor 5.0.0
Deterministic and standard extractor of indels, SNVs and structural variants (SVs) from VCF files.11 versions - Latest release: 6 months ago - 1 dependent package - 153 downloads last month - 7 stars on GitHub - 1 maintainer
Top 5.6% on pypi.org
61 versions - Latest release: 10 months ago - 6 dependent packages - 28 dependent repositories - 59.2 thousand downloads last month - 20 stars on GitHub - 4 maintainers
bioutils 0.6.1
miscellaneous simple bioinformatics utilities and lookup tables61 versions - Latest release: 10 months ago - 6 dependent packages - 28 dependent repositories - 59.2 thousand downloads last month - 20 stars on GitHub - 4 maintainers
open-cravat-multiuser 2.12.1
OpenCRAVAT Multiuser Addon15 versions - Latest release: 5 months ago - 1 dependent repositories - 44 downloads last month - 120 stars on GitHub - 1 maintainer
gnomad-db 0.1.4
This package scales the huge gnomAD files to a SQLite database, which is easy and fast to query. ...13 versions - Latest release: almost 2 years ago - 1 dependent repositories - 109 downloads last month - 47 stars on GitHub - 1 maintainer
granite-suite 0.3.0
granite is a collection of software to call, filter and work with genomic variants.21 versions - Latest release: about 1 year ago - 1 dependent package - 1 dependent repositories - 176 downloads last month - 6 stars on GitHub - 2 maintainers
virheat 0.7.5
virHEAT creates a heatmap from vcf files and maps positions on to a reference genome.16 versions - Latest release: 27 days ago - 36 downloads last month - 14 stars on GitHub - 1 maintainer
seqrepo-rest-service 0.2.2
SeqRepo REST Service2 versions - Latest release: almost 2 years ago - 20 downloads last month - 4 stars on GitHub - 3 maintainers
Related Keywords
bioinformatics
11
genomics
7
variation
5
genome-analysis
5
sequencing
5
vcf
4
snv
2
genetics
2
bioinformatics-tool
2
biocommons
2
hgvs
1
genomic-data-analysis
1
javascript
1
python
1
python3
1
variant-annotation
1
variant-annotations
1
annotation
1
database
1
gnomad
1
rare-variant-analysis
1
compound-heterozygous
1
de-novo-mutation
1
de-novo-mutations
1
single-nucleotide-variation
1
snvs
1
trio
1
variant-filtration
1
variants
1
snp
1
evolution
1
genome-visualization
1
heatmap
1
pypi-package
1
snps
1
vcf-files
1
viral-genomics
1
python-bindings
1
cpp
1
toolkit
1
genome variation
1
bioinformatics-visualization
1
isoforms
1
protein-structure
1
proteins
1
sequence-alignment
1
varseek
1
k-mer
1
RNA-seq
1
DNA-seq
1
biomedical-ontologies
1
genomic-variants
1
knowledge-enhanced-learning
1
neuro-symbolic
1
prioritization-algorithm
1
computational biology
1
variant
1
indel
1
sv
1
variant-calling
1
HGVS
1
annotation-tool
1
bioinformatics-pipeline
1