pypi.org "variants" keyword
View the packages on the pypi.org package registry that are tagged with the "variants" keyword.
py-everything 2.3.0
A python module containing all the basic functions and classes for python but doesn't stop at tha...10 versions - Latest release: about 4 years ago - 1 dependent repositories - 53 downloads last month - 11 stars on GitHub - 1 maintainer
varapp-backend-py 1.0.1.1
Genomic variants explorer2 versions - Latest release: about 2 years ago - 3 dependent repositories - 5 downloads last month - 20 stars on GitHub - 1 maintainer
variant_integrity 0.0.4
Tool to check mendelian errors and estimate if father is father4 versions - Latest release: almost 9 years ago - 2 dependent repositories - 16 downloads last month - 1 stars on GitHub - 3 maintainers
gofeatureflag-python-provider 0.4.4 💰
GO Feature Flag provider for OpenFeature14 versions - Latest release: about 2 months ago - 12.2 thousand downloads last month - 1,733 stars on GitHub - 1 maintainer
vatools 5.2.0
A tool for annotating VCF files with expression and readcount data10 versions - Latest release: 6 months ago - 1 dependent repositories - 249 downloads last month - 29 stars on GitHub - 3 maintainers
cmdbtools 1.1.3
cmdbtools: A command line tools for CMDB variant browser.13 versions - Latest release: about 3 years ago - 1 dependent repositories - 24 downloads last month - 23 stars on GitHub - 1 maintainer
Top 7.9% on pypi.org
171 versions - Latest release: 4 days ago - 1 dependent package - 2 dependent repositories - 1.92 thousand downloads last month - 151 stars on GitHub - 4 maintainers
scout-browser 4.104.0
Clinical DNA variant visualizer and browser171 versions - Latest release: 4 days ago - 1 dependent package - 2 dependent repositories - 1.92 thousand downloads last month - 151 stars on GitHub - 4 maintainers
Top 8.7% on pypi.org
168 versions - Latest release: 5 months ago - 7 dependent repositories - 287 downloads last month - 67 stars on GitHub - 5 maintainers
genmod 3.10.1
Annotate genetic inheritance models in Variant Call Format (VCF) files168 versions - Latest release: 5 months ago - 7 dependent repositories - 287 downloads last month - 67 stars on GitHub - 5 maintainers
cgbeacon2 4.5.1
A beacon supporting GA4GH API 1.010 versions - Latest release: almost 2 years ago - 1 dependent repositories - 70 downloads last month - 0 stars on GitHub - 1 maintainer
ga4gh-server 0.3.6
A reference implementation of the GA4GH API1 version - Latest release: over 8 years ago - 2 dependent repositories - 7 downloads last month - 98 stars on GitHub - 2 maintainers
vcf_parser 1.5.9
Parsing vcf files49 versions - Latest release: almost 9 years ago - 4 dependent repositories - 115 downloads last month - 46 stars on GitHub - 1 maintainer
snoopy 0.4.7
Browser based quality control tool to expedite reviewing predicted variants in next generation se...7 versions - Latest release: almost 9 years ago - 3 dependent repositories - 61 downloads last month - 9 stars on GitHub - 1 maintainer
biovars 0.2.0
Tool for joining all the bioinfo-hcpa's variant information retrieval APIs.3 versions - Latest release: about 1 year ago - 34 downloads last month - 4 stars on GitHub - 1 maintainer
Top 8.1% on pypi.org
9 versions - Latest release: almost 6 years ago - 3 dependent repositories - 162 downloads last month - 153 stars on GitHub - 3 maintainers
svtools 0.5.1
Tools for processing and analyzing structural variants9 versions - Latest release: almost 6 years ago - 3 dependent repositories - 162 downloads last month - 153 stars on GitHub - 3 maintainers
pynoma 0.2.1
A Python API to communicate with gnomAD database.2 versions - Latest release: about 1 year ago - 1 dependent repositories - 18 downloads last month - 8 stars on GitHub - 1 maintainer
snptoolkit 2.3.0
Explore, filter, annotate and analyse your SNPs/indels from VCF files24 versions - Latest release: over 4 years ago - 1 dependent repositories - 138 downloads last month - 4 stars on GitHub - 1 maintainer
vcf-annotation-tools 3.0.0
A tool for annotating VCF files with expression and readcount data15 versions - Latest release: over 6 years ago - 1 dependent repositories - 46 downloads last month - 29 stars on GitHub - 1 maintainer
pvacseq 4.0.10
Personalized Variant Antigens by Cancer Sequencing (pVAC-Seq)20 versions - Latest release: about 8 years ago - 2 dependent repositories - 67 downloads last month - 61 stars on GitHub - 2 maintainers
Top 9.9% on pypi.org
91 versions - Latest release: 13 days ago - 1 dependent repositories - 541 downloads last month - 157 stars on GitHub - 3 maintainers
pvactools 5.5.1
A cancer immunotherapy tools suite91 versions - Latest release: 13 days ago - 1 dependent repositories - 541 downloads last month - 157 stars on GitHub - 3 maintainers
mutalyzer-algebra 1.5.2
A Boolean Algebra for Genetic Variants21 versions - Latest release: 8 months ago - 2 dependent packages - 1 dependent repositories - 767 downloads last month - 11 stars on GitHub - 2 maintainers
hchacha 1.0.5
Human CHromosome Accession CHAnge - Convert between different human chromosome naming systems (of...6 versions - Latest release: about 2 years ago - 33 downloads last month - 1 maintainer
charger 0.5.2
Characterization of Germline variants4 versions - Latest release: over 7 years ago - 1 dependent repositories - 49 downloads last month - 98 stars on GitHub - 2 maintainers
hifisr 0.5.0
HiFi-SR is a Python-based pipeline for the detection of plant mitochondrial structural rearrangem...4 versions - Latest release: 5 months ago - 37 downloads last month - 11 stars on GitHub - 1 maintainer
patientmatcher 4.6.1
patientMatcher - a Python and MongoDB-based MatchMaker Exchange server27 versions - Latest release: about 2 months ago - 1 dependent repositories - 333 downloads last month - 11 stars on GitHub - 3 maintainers
pepper-polish 0.1.5
RNN based standalone assembly polisher.8 versions - Latest release: almost 5 years ago - 1 dependent repositories - 39 downloads last month - 253 stars on GitHub - 1 maintainer
python-outbreak-info 1.0.4
Python interface to Outbreak.info, powered by GISAID4 versions - Latest release: over 1 year ago - 1 dependent repositories - 86 downloads last month - 6 stars on GitHub - 1 maintainer
transcriptionary 0.1.1
transcript plots2 versions - Latest release: over 2 years ago - 9 downloads last month - 2 stars on GitHub - 1 maintainer
pvacseq-client 0.0.2
Web Front-End for pVAC-Seq3 versions - Latest release: over 8 years ago - 1 dependent package - 1 dependent repositories - 5 downloads last month - 0 stars on GitHub - 3 maintainers
stranger 0.9.5
Annotate VCF files with STR variants with pathogenicity implications20 versions - Latest release: 3 months ago - 2 dependent repositories - 193 downloads last month - 32 stars on GitHub - 3 maintainers
proteofav 0.2.3
PROtein Feature Aggregation and Variants.3 versions - Latest release: almost 8 years ago - 1 dependent repositories - 11 downloads last month - 4 stars on GitHub - 1 maintainer
variants 0.2.0
Library that enables the creation of alternate constructor-likevariant forms for arbitrary functi...3 versions - Latest release: over 7 years ago - 6 dependent repositories - 68 downloads last month - 74 stars on GitHub - 1 maintainer
parterre 1.4.1
A set of variants for the Parlance Diplomacy Framework.1 version - Latest release: about 16 years ago - 1 dependent repositories - 9 downloads last month - 1 maintainer
clinvar-this 0.18.5
ClinVar Submission via API Made Easy37 versions - Latest release: 6 months ago - 297 downloads last month - 10 stars on GitHub - 1 maintainer
mitoviz 0.9.0
Plot variants on the human mitochondrial genome.21 versions - Latest release: about 5 years ago - 1 dependent repositories - 99 downloads last month - 2 stars on GitHub - 1 maintainer
granite-suite 0.3.0
granite is a collection of software to call, filter and work with genomic variants.21 versions - Latest release: about 1 year ago - 1 dependent package - 1 dependent repositories - 176 downloads last month - 6 stars on GitHub - 2 maintainers
ensembl-variant-lookup 0.1.2
a user-friendly interface for searching individual variants, batch queries, and exploring gene re...3 versions - Latest release: over 1 year ago - 26 downloads last month - 0 stars on GitHub - 1 maintainer
fings 1.7.1
Filters for Next Generation Sequencing4 versions - Latest release: over 4 years ago - 1 dependent repositories - 24 downloads last month - 12 stars on GitHub - 1 maintainer
seaviz 0.1
Play around with seaborn plots from a cli1 version - Latest release: over 6 years ago - 1 dependent repositories - 15 downloads last month - 0 stars on GitHub - 1 maintainer
pytest-variant 1.1.0
Variant support for Pytest2 versions - Latest release: over 3 years ago - 1 dependent repositories - 22 downloads last month - 1 stars on GitHub - 1 maintainer
ga4gh 0.3.5
A reference implementation of the GA4GH API18 versions - Latest release: over 8 years ago - 3 dependent repositories - 52 downloads last month - 98 stars on GitHub - 3 maintainers
gdbigtools 1.1.6
GDBIGtools: A command line tools for GDBIG variant browser.3 versions - Latest release: almost 4 years ago - 1 dependent repositories - 19 downloads last month - 6 stars on GitHub - 1 maintainer
score_mip_variants 0.6.2
Annotate vcf variants with a rank score15 versions - Latest release: over 10 years ago - 2 dependent repositories - 16 downloads last month - 1 maintainer
python-outbreak-data 1.0
Python interface to Outbreak.info, powered by GISAID1 version - Latest release: over 2 years ago - 4 downloads last month - 5 stars on GitHub - 1 maintainer
upd 0.2 removed
Simple software to call UPD regions from germline exome/wgs trios.1 version - Latest release: over 2 years ago - 1 maintainer
Related Keywords
vcf
12
bioinformatics
10
genomics
9
variant
8
cancer
7
sequencing
7
python
5
api
4
gnomad
3
genes
3
gene
3
antigens
3
neoantigens
3
clinvar
3
genomics-data
3
str
3
rna
3
covid-19
2
covid-data
2
genomics-visualization
2
expression
2
readcounts
2
VAF
2
sars-cov-2
2
allele
2
genetics
2
frequency
2
FPKM
2
TPM
2
transcript
2
VCF
2
reference
2
database
2
genomics-api
2
acmg
2
beacon
2
long-read
2
dna
2
fusion
2
sv
2
snv
2
snvs
2
genome
2
filtering
2
annotations
2
bam
2
server
2
alliance
2
ga4gh
2
reference-implementation
2
genome-annotation
2
health
2
global
2
pathogenic
1
arabidopsis
1
heteroplasmy
1
exome
1
fasta
1
mitochondrial-genomes
1
diagnosis
1
hpo-similarity
1
matching-algorithm
1
bed
1
sam
1
extractor
1
matchmaker
1
advanced-programming
1
benign
1
ClinVar
1
ExAC
1
vep
1
VEP
1
BioMine
1
germline
1
classifier
1
characterization
1
clinical
1
diseases
1
exac
1
germline-variants
1
pathogenic-variants
1
pathogenicity
1
daide
1
diplomacy
1
board
1
game
1
ncbi
1
mitoviz
1
mitochondria
1
python3
1
visualization
1
compound-heterozygous
1
de-novo-mutation
1
de-novo-mutations
1
single-nucleotide-variation
1
trio
1
variant-analysis
1
variant-filtration
1
ensembl-rest
1
danymukesha
1