Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
pypi.org "brain" keyword
accelbrainbeat 1.0.5
AccelBrainBeat is a Python library for creating the binaural beats or monaural beats. You can pla...10 versions - Latest release: about 6 years ago - 191 downloads last month - 298 stars on GitHub - 2 maintainers
artbrain 1.0.1 💰
embed images into brain imaging data3 versions - Latest release: over 8 years ago - 2 dependent repositories - 28 downloads last month - 0 stars on GitHub - 1 maintainer
avicortex 1.0.0
Python functions and classes to build connectivity graphs and datasets from Freesurfer's brain co...14 versions - Latest release: 2 months ago - 92 downloads last month - 0 stars on GitHub - 1 maintainer
bbb-calculator 1.0
Implements the blood brain barrier score described in: J. Med. Chem. 2019, 62, 21, 9824-98361 version - Latest release: about 4 years ago - 14 downloads last month - 11 stars on GitHub - 1 maintainer
bcblib 0.3.4
32 versions - Latest release: about 1 year ago - 1 dependent repositories - 154 downloads last month - 2 stars on GitHub - 1 maintainer
Top 5.6% on pypi.org
10 versions - Latest release: 4 months ago - 13 dependent packages - 4 dependent repositories - 2.26 thousand downloads last month - 111 stars on GitHub - 4 maintainers
bg-atlasapi 1.0.3
A lightweight python module to interact with atlases for systems neuroscience10 versions - Latest release: 4 months ago - 13 dependent packages - 4 dependent repositories - 2.26 thousand downloads last month - 111 stars on GitHub - 4 maintainers
bioexplorer 1.7.1
Python API for the Blue Brain BioExplorer12 versions - Latest release: 5 months ago - 2 dependent repositories - 61 downloads last month - 62 stars on GitHub - 2 maintainers
bluecellulab 2.6.12
Biologically detailed neural network simulations and analysis.102 versions - Latest release: 10 days ago - 1 dependent package - 1 dependent repositories - 2.58 thousand downloads last month - 8 stars on GitHub - 1 maintainer
borsar 0.1
tools for electrophysiological analysis, especially cluster-based tests.1 version - Latest release: 7 months ago - 1 dependent package - 27 downloads last month - 8 stars on GitHub - 1 maintainer
boss-ingest 0.12.0
Ingest client for the Boss17 versions - Latest release: about 3 years ago - 1 dependent repositories - 130 downloads last month - 5 stars on GitHub - 2 maintainers
brain-ai 0.1.5
Build your own intelligent personal assistant.6 versions - Latest release: almost 6 years ago - 66 downloads last month - 2 stars on GitHub - 1 maintainer
brainart 1.0.9 💰
make images out of brain imaging data12 versions - Latest release: almost 7 years ago - 2 dependent repositories - 42 downloads last month - 4 stars on GitHub - 1 maintainer
brainatlas-api 0.0.2rc0
A lightweight python module to interact with atlases for systems neuroscience4 versions - Latest release: almost 4 years ago - 1 dependent repositories - 32 downloads last month - 112 stars on GitHub - 3 maintainers
brainglobe-atlasapi 2.0.6
A lightweight python module to interact with and generate atlases for systems neuroscience.7 versions - Latest release: 3 days ago - 8 dependent packages - 5.14 thousand downloads last month - 112 stars on GitHub - 3 maintainers
brainload 0.3.5 💰
Load FreeSurfer brain imaging data with minimal cognitive load.8 versions - Latest release: over 4 years ago - 2 dependent repositories - 64 downloads last month - 9 stars on GitHub - 1 maintainer
brainplotlib 1.0.0
A lightweight package to plot brain surfaces with Python.7 versions - Latest release: over 1 year ago - 1 dependent repositories - 91 downloads last month - 31 stars on GitHub - 1 maintainer
brainreg 1.0.9
Automated multi-atlas whole-brain microscopy registration45 versions - Latest release: 3 days ago - 6 dependent packages - 1 dependent repositories - 1.6 thousand downloads last month - 108 stars on GitHub - 2 maintainers
brainreg-napari 0.1.4
Multi-atlas whole-brain microscopy registration12 versions - Latest release: 4 months ago - 2 dependent packages - 140 downloads last month - 13 stars on GitHub - 1 maintainer
brainsimulator 0.5.4
Nuclear brain imaging synthesis with python4 versions - Latest release: over 6 years ago - 14 downloads last month - 0 stars on GitHub - 1 maintainer
Top 4.8% on pypi.org
7 versions - Latest release: over 1 year ago - 8 dependent packages - 13 dependent repositories - 1.09 thousand downloads last month - 172 stars on GitHub - 2 maintainers
brainspace 0.1.10
Cortical gradients and beyond7 versions - Latest release: over 1 year ago - 8 dependent packages - 13 dependent repositories - 1.09 thousand downloads last month - 172 stars on GitHub - 2 maintainers
brainsprite 0.14.2 💰
Python API for the brainsprite MRI brain viewer3 versions - Latest release: about 4 years ago - 1 dependent repositories - 46 downloads last month - 37 stars on GitHub - 1 maintainer
brainview 0.0.1 💰
Visualize morphometry neuroimaging data on 3D brain meshes.1 version - Latest release: over 5 years ago - 1 dependent repositories - 21 downloads last month - 4 stars on GitHub - 1 maintainer
brayns 3.7.2
Brayns Python API26 versions - Latest release: 18 days ago - 1 dependent repositories - 138 downloads last month - 286 stars on GitHub - 1 maintainer
bsl 0.6.4
Real-time framework for online neuroscience research through LSL-compatible devices.15 versions - Latest release: 8 months ago - 455 downloads last month - 0 stars on GitHub - 1 maintainer
celegans 0.0.1
CELEGANS Network Toolbox1 version - Latest release: over 6 years ago - 10 downloads last month - 1 maintainer
clarityviz 0.1.7
A pipeline used to vizualize and analyze clarity treated brain images.11 versions - Latest release: about 7 years ago - 95 downloads last month - 1 stars on GitHub - 1 maintainer
cmb 0.0.7
Cere-MEG-Bellum (CMB) - Cerbellum segmentation and forward solution calculation7 versions - Latest release: about 2 years ago - 26 downloads last month - 1 maintainer
connectomemapper 3.1.0
Connectome Mapper 3: A Flexible and Open-Source Pipeline Software for Multiscale Multimodal Human...5 versions - Latest release: over 1 year ago - 1 dependent repositories - 56 downloads last month - 61 stars on GitHub - 1 maintainer
cortex2 1.0.1
Comprehensive threaded, asynchronous Python client for the Emotiv EEG Cortex 2 API5 versions - Latest release: almost 5 years ago - 1 dependent repositories - 34 downloads last month - 19 stars on GitHub - 1 maintainer
cvasl 0.0.2
A package for analysis of MRI2 versions - Latest release: 5 months ago - 11 downloads last month - 4 stars on GitHub - 1 maintainer
deepneuroseg 0.4
Deep-learning Tool for White Matter (WM) lesions and Claustrum structure segmentation in brain ma...4 versions - Latest release: almost 3 years ago - 1 dependent repositories - 16 downloads last month - 4 stars on GitHub - 1 maintainer
deepparcellation 1.0.35
DeepParcellation: fast and accurate brain MRI parcellation by deep learning36 versions - Latest release: over 2 years ago - 1 dependent repositories - 115 downloads last month - 3 stars on GitHub - 1 maintainer
deepslice 1.1.7
A package to align histology to 3D brain atlases16 versions - Latest release: 4 months ago - 671 downloads last month - 69 stars on GitHub - 1 maintainer
deepsurfer 0.1.1a4
Learning-Based Utilities for Neuroimage Analysis6 versions - Latest release: 3 months ago - 381 downloads last month - 2 maintainers
deep-tumour-spheroid 1.0.0rc1
Deep Learning methods for the segmentation of Tumour Spheroids1 version - Latest release: over 3 years ago - 1 dependent repositories - 19 downloads last month - 34 stars on GitHub - 1 maintainer
Top 1.4% on pypi.org
27 versions - Latest release: 2 months ago - 46 dependent packages - 204 dependent repositories - 29.2 thousand downloads last month - 651 stars on GitHub - 4 maintainers
dipy 1.9.0
Diffusion MRI Imaging in Python27 versions - Latest release: 2 months ago - 46 dependent packages - 204 dependent repositories - 29.2 thousand downloads last month - 651 stars on GitHub - 4 maintainers
dyconnmap 1.0.4
A dynamic connectome mapping module in Python4 versions - Latest release: about 3 years ago - 1 dependent repositories - 32 downloads last month - 96 stars on GitHub - 1 maintainer
eegsynth 0.7.7
Converting real-time EEG into sounds, music and visual effects28 versions - Latest release: 4 months ago - 1 dependent repositories - 223 downloads last month - 327 stars on GitHub - 1 maintainer
esi-syncopy 2023.9
A toolkit for user-friendly large-scale electrophysiology data analysis. Syncopy is compatible wi...9 versions - Latest release: 8 months ago - 1 dependent repositories - 107 downloads last month - 37 stars on GitHub - 1 maintainer
evaler 0.0.2
Evaler.2 versions - Latest release: over 2 years ago - 1 dependent repositories - 38 downloads last month - 3 stars on GitHub - 1 maintainer
fafbseg 3.0.7
Tools to work with the FlyWire and Google segmentations of the FAFB EM dataset42 versions - Latest release: 2 days ago - 1 dependent package - 1 dependent repositories - 576 downloads last month - 12 stars on GitHub - 1 maintainer
flybrains 0.2.10
Transforms to map between different Drosophila template brains23 versions - Latest release: about 1 month ago - 3 dependent packages - 2 dependent repositories - 514 downloads last month - 5 stars on GitHub - 1 maintainer
freesurfer-stats 1.2.1
Python Library to Read FreeSurfer's cortical parcellation anatomical statistics5 versions - Latest release: over 3 years ago - 1 dependent repositories - 192 downloads last month - 12 stars on GitHub - 1 maintainer
freesurfer-surface 2.0.0
Python Library to Read and Write Surface Files in Freesurfer's TriangularSurface Format10 versions - Latest release: almost 3 years ago - 3 dependent repositories - 122 downloads last month - 8 stars on GitHub - 1 maintainer
freesurfer-volume-reader 2.1.1
Python script & library to read hippocampal subfield volumescomputed by Freesurfer & ASHS8 versions - Latest release: almost 3 years ago - 1 dependent repositories - 85 downloads last month - 4 stars on GitHub - 1 maintainer
frequency-max-power 0.1.1
A Python library for calculating frequency_max_power2 versions - Latest release: 6 months ago - 16 downloads last month - 15 stars on GitHub - 1 maintainer
hmp 0.3.2
Package for fitting Hidden Multivariate pattern model to time-series3 versions - Latest release: 3 months ago - 66 downloads last month - 30 stars on GitHub - 1 maintainer
hsf 1.2.1
A simple yet exhaustive segmentation tool of the Hippocampal Subfields in T1w and T2w MRIs.11 versions - Latest release: about 2 months ago - 1 dependent repositories - 186 downloads last month - 5 stars on GitHub - 2 maintainers
hyperalignment 0.1.1
Hyperalignment algorithms for functional alignment of fMRI data.1 version - Latest release: about 1 year ago - 69 downloads last month - 1 maintainer
Top 9.8% on pypi.org
24 versions - Latest release: about 1 year ago - 3 dependent packages - 11 dependent repositories - 213 downloads last month - 19 stars on GitHub - 2 maintainers
intern 1.4.1
Python SDK for interacting with neuroscience data via the Boss API.24 versions - Latest release: about 1 year ago - 3 dependent packages - 11 dependent repositories - 213 downloads last month - 19 stars on GitHub - 2 maintainers
ipytransferfunction 0.2.0
Transfer function editor for Blue Brain BioExplorer1 version - Latest release: about 3 years ago - 1 dependent repositories - 6 downloads last month - 2 stars on GitHub - 1 maintainer
irregconv 0.9
easy to use Irregularly shaped convolution kernels9 versions - Latest release: over 2 years ago - 1 dependent repositories - 12 downloads last month - 3 stars on GitHub - 1 maintainer
keymorph 1.0.0
KeyMorph is a deep learning-based image registration framework that relies on automatically extra...2 versions - Latest release: 8 days ago - 190 downloads last month - 46 stars on GitHub - 1 maintainer
lib-dzne-analyze-seq-further 0.2.5
This package was created to contain all parts of the aBASE-like sequence read analysis that are s...6 versions - Latest release: 4 months ago - 10 downloads last month - 1 stars on GitHub - 1 maintainer
mapbrain 0.9.3
Brain image feature extraction and visualization1 version - Latest release: almost 6 years ago - 1 dependent repositories - 16 downloads last month - 0 stars on GitHub - 1 maintainer
mecons 0.0.3
MeCons project for measuring consciousness.1 version - Latest release: over 1 year ago - 5 downloads last month - 0 stars on GitHub - 1 maintainer
mediamaker 0.3.1
Media Maker Python SDK for Blue Brain BioExplorer2 versions - Latest release: almost 3 years ago - 1 dependent repositories - 16 downloads last month - 62 stars on GitHub - 1 maintainer
mfdfa1000hz 0.1.0
A Python library for calculating MFDFA for 1000hz1 version - Latest release: 6 months ago - 10 downloads last month - 15 stars on GitHub - 1 maintainer
microtraining 0.1.0
Hans provides solutions. Always.1 version - Latest release: over 1 year ago - 8 downloads last month - 0 stars on GitHub - 1 maintainer
Top 1.0% on pypi.org
77 versions - Latest release: 29 days ago - 149 dependent packages - 646 dependent repositories - 117 thousand downloads last month - 2,511 stars on GitHub - 3 maintainers
mne 1.7.0
MNE-Python project for MEG and EEG data analysis.77 versions - Latest release: 29 days ago - 149 dependent packages - 646 dependent repositories - 117 thousand downloads last month - 2,511 stars on GitHub - 3 maintainers
mne-lsl 1.3.1
Real-time framework integrated with MNE-Python for online neuroscience research through LSL-compa...6 versions - Latest release: about 2 months ago - 1 dependent package - 1.26 thousand downloads last month - 48 stars on GitHub - 3 maintainers
mne-nirs 0.6.0
An MNE compatible package for processing near-infrared spectroscopy data.16 versions - Latest release: 6 months ago - 1 dependent repositories - 367 downloads last month - 72 stars on GitHub - 2 maintainers
mrqa 0.2.4
rQA suite of tools offering automatic evaluation of protocol compliance10 versions - Latest release: 12 months ago - 154 downloads last month - 9 stars on GitHub - 1 maintainer
musestudio 0.2.0
Import Muse recordings. Convert data to MNE and Pandas. View brain data in real time.2 versions - Latest release: over 1 year ago - 1 dependent repositories - 20 downloads last month - 6 stars on GitHub - 1 maintainer
ndexchange 1.0.10
Python 3 program to download data from NeuroData11 versions - Latest release: about 5 years ago - 1 dependent repositories - 11 downloads last month - 4 stars on GitHub - 2 maintainers
ndio 1.1.6
A Python library for open neuroscience data access and manipulation.53 versions - Latest release: over 7 years ago - 3 dependent repositories - 186 downloads last month - 18 stars on GitHub - 1 maintainer
neural-signal-analysis 0.2.8
A comprehensive Python library for human brain/ cortical organoid/spheroid eeg/ecog/mea data anal...9 versions - Latest release: 5 months ago - 68 downloads last month - 15 stars on GitHub - 1 maintainer
Top 3.9% on pypi.org
2 versions - Latest release: almost 2 years ago - 1 dependent package - 17 dependent repositories - 7.02 thousand downloads last month - 317 stars on GitHub - 1 maintainer
neurite 0.2
Neural Networks Toolbox for Medical Imaging2 versions - Latest release: almost 2 years ago - 1 dependent package - 17 dependent repositories - 7.02 thousand downloads last month - 317 stars on GitHub - 1 maintainer
neuroboros 0.1.7
Neuroimaging analysis in Python9 versions - Latest release: 3 months ago - 1.4 thousand downloads last month - 3 stars on GitHub - 1 maintainer
neurodamus 3.2.1
A BBP Simulation Control application for NEURON4 versions - Latest release: 18 days ago - 681 downloads last month - 8 stars on GitHub - 2 maintainers
neurokernel 0.3.1
An open architecture for Drosophila brain emulation2 versions - Latest release: almost 2 years ago - 4 dependent repositories - 32 downloads last month - 542 stars on GitHub - 1 maintainer
neuron_ui 0.0.1
User interface for NEURON based on web technologies and Jupyter2 versions - Latest release: about 7 years ago - 16 downloads last month - 16 stars on GitHub - 1 maintainer
neuroruler 1.0.1
A program that calculates head circumference from MRI data (.nii, .nii.gz, .nrrd).10 versions - Latest release: about 1 year ago - 94 downloads last month - 8 stars on GitHub - 1 maintainer
nidatasets 0.1.0
Convenient access to preprocessed brain imaging data.2 versions - Latest release: almost 2 years ago - 20 downloads last month - 0 stars on GitHub - 1 maintainer
nidmviewer 0.1.3 💰
command line or server tool to view or compare nidm results.3 versions - Latest release: almost 8 years ago - 2 dependent repositories - 10 downloads last month - 3 stars on GitHub - 1 maintainer
nigsp 0.19.0
A python library (and toolbox!) to run Graph Signal Processing on multimodal MRI data.32 versions - Latest release: 23 days ago - 1 dependent repositories - 409 downloads last month - 16 stars on GitHub - 1 maintainer
ocpy 0.5.3
Deprecated. Use ndio instead.10 versions - Latest release: over 8 years ago - 2 dependent repositories - 36 downloads last month - 1 maintainer
Top 6.9% on pypi.org
10 versions - Latest release: about 2 months ago - 1 dependent package - 8 dependent repositories - 2.27 thousand downloads last month - 70 stars on GitHub - 2 maintainers
openmeeg 2.5.8
Forward problems solver in the field of EEG and MEG.10 versions - Latest release: about 2 months ago - 1 dependent package - 8 dependent repositories - 2.27 thousand downloads last month - 70 stars on GitHub - 2 maintainers
phase-space-2d 0.1.0
A Python library for calculating and plotting phase space1 version - Latest release: 6 months ago - 12 downloads last month - 15 stars on GitHub - 1 maintainer
phase-space-3d 0.1.0
A Python library for calculating and plotting phase space 3d1 version - Latest release: 6 months ago - 11 downloads last month - 15 stars on GitHub - 1 maintainer
pybids-reports 0.1.0
pybids-reports: report generator for BIDS datasets1 version - Latest release: about 1 month ago - 145 downloads last month - 1 stars on GitHub - 1 maintainer
pybraincompare 0.1.19 💰
meta analysis and comparison for neuroimaging in python20 versions - Latest release: about 6 years ago - 4 dependent repositories - 83 downloads last month - 16 stars on GitHub - 1 maintainer
Top 5.9% on pypi.org
15 versions - Latest release: over 1 year ago - 5 dependent packages - 48 dependent repositories - 7.26 thousand downloads last month - 21 stars on GitHub - 3 maintainers
pybv 0.7.5
pybv -- A lightweight I/O utility for the BrainVision data format.15 versions - Latest release: over 1 year ago - 5 dependent packages - 48 dependent repositories - 7.26 thousand downloads last month - 21 stars on GitHub - 3 maintainers
pycrostates 0.5.0
A simple open source Python package for EEG microstate segmentation.8 versions - Latest release: 3 months ago - 141 downloads last month - 33 stars on GitHub - 2 maintainers
pydra-templateflow 0.0.2
Pydra tasks for TemplateFlow2 versions - Latest release: about 1 year ago - 23 downloads last month - 1 stars on GitHub - 1 maintainer
pyhaze 0.1.3 💰
Fast smoothing of per-vertex data on triangular meshes.4 versions - Latest release: over 1 year ago - 31 downloads last month - 1 stars on GitHub - 1 maintainer
pylabianca 0.2.0
Package for analysis of single-neuron spike data.2 versions - Latest release: 5 months ago - 22 downloads last month - 3 stars on GitHub - 1 maintainer
pyllusion 0.0.12 💰
A Parametric Framework to Generate Visual Illusions.8 versions - Latest release: almost 3 years ago - 1 dependent repositories - 82 downloads last month - 53 stars on GitHub - 2 maintainers
pyrastitcher 0.0.1
Provides a Python interface to the Terastitcher program.1 version - Latest release: about 8 years ago - 2 dependent repositories - 10 downloads last month - 1 stars on GitHub - 1 maintainer
pyrho 0.9.4
Fit and characterise rhodopsin photocurrents1 version - Latest release: about 8 years ago - 1 dependent repositories - 30 downloads last month - 33 stars on GitHub - 1 maintainer
rbm 0.0.3
Rodent Brain Masking Tool with Keras 2D Unet4 versions - Latest release: over 3 years ago - 1 dependent repositories - 39 downloads last month - 1 maintainer
rbm3 0.0.5
Rodent Brain Masking Tool with Keras 3D Unet1 version - Latest release: over 2 years ago - 1 dependent repositories - 16 downloads last month - 1 maintainer
roiloc 0.3.0
A simple package to center and crop T1w & T2w MRIs around a given region of interest by its name.13 versions - Latest release: about 2 years ago - 1 dependent package - 1 dependent repositories - 139 downloads last month - 4 stars on GitHub - 2 maintainers
searchlights 0.2.0
A collection of pre-computed searchlights.2 versions - Latest release: almost 2 years ago - 1 dependent repositories - 17 downloads last month - 3 stars on GitHub - 1 maintainer
Top 7.9% on pypi.org
78 versions - Latest release: 11 days ago - 3 dependent packages - 4 dependent repositories - 1.97 thousand downloads last month - 44 stars on GitHub - 2 maintainers
siibra 1.0a11
siibra - Software interfaces for interacting with brain atlases78 versions - Latest release: 11 days ago - 3 dependent packages - 4 dependent repositories - 1.97 thousand downloads last month - 44 stars on GitHub - 2 maintainers
spectral-centroids 0.1.1
A Python library for calculating spectral_centroids2 versions - Latest release: 6 months ago - 20 downloads last month - 15 stars on GitHub - 1 maintainer
spectral-edge-density 0.1.1
A Python library for calculating spectral_edge_density2 versions - Latest release: 6 months ago - 14 downloads last month - 15 stars on GitHub - 1 maintainer
spectral-entropy-signals 0.1.0
A Python library for calculating spectral entropy1 version - Latest release: 6 months ago - 9 downloads last month - 15 stars on GitHub - 1 maintainer
stacking-fmri 0.1.1
An implementation of stacked regression for functional MRI (fMRI) data2 versions - Latest release: 9 months ago - 16 downloads last month - 4 stars on GitHub - 1 maintainer
stftsignal 0.1.0
A Python library for calculating Short-Time Fourier Transform1 version - Latest release: 6 months ago - 11 downloads last month - 15 stars on GitHub - 1 maintainer
Related Keywords
neuroscience
59
python
36
neuroimaging
36
eeg
25
computational-neuroscience
15
bci
15
chaos
13
brain-computer-interface
13
chaos-theory
13
biohybrid-computing
13
biohybrid
13
dynamical-systems
13
tes
13
simulation
11
EEG
10
microscopy
10
mri
10
connectome
9
registration
9
fmri
9
tvb
8
simulator
7
neuroscience-m
7
MEG
7
cortex
7
surface
7
MRI
7
human
6
neuron
6
animal
6
neuronal
6
freesurfer
6
dynamics
6
models
6
delay
6
connectomics
6
meg
6
segmentation
6
machine-learning
5
visualization
5
EM
5
atlases
5
visualisation
5
deep-learning
5
calcium
4
bbp
4
spatial
4
neuro
4
boss
3
parcellation
3
electroencephalography
3
template
3
database
3
data
3
imaging
3
electron
3
analysis
3
ECoG
3
connectivity
3
python3
3
client
3
neural-network
3
network
3
ecog
3
art
3
covid
3
covid19
3
atlas
3
reader
3
coronavirus
3
blue
3
virus
3
molecule
3
molecular system
3
dti
3
statistics
3
mesh
3
raytracing
3
real-time
3
brainweb
2
medical-imaging
2
plot
2
bids
2
ocpy
2
ocp
2
ocp.me
2
rodent
2
automation
2
masking
2
fNIRS
2
fMRI
2
image
2
websockets
2
anatomy
2
neuroanatomy
2
perception
2
LSL
2
neurodata.io
2
neurodata
2
pytorch
2