Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
pypi.org "genome-scale-models" keyword
smetana 1.2.0
Species METabolic interaction ANAlysis (SMETANA) is a python-based command line tool to analyse m...5 versions - Latest release: over 4 years ago - 1 dependent repositories - 149 downloads last month - 53 stars on GitHub - 1 maintainer
helen 0.0.23
RNN based assembly HELEN. It works paired with MarginPolish.19 versions - Latest release: about 4 years ago - 1 dependent repositories - 136 downloads last month - 68 stars on GitHub - 1 maintainer
designmc 0.1.0
Microbial Community Designer1 version - Latest release: over 4 years ago - 1 dependent repositories - 20 downloads last month - 5 stars on GitHub - 1 maintainer
bofdat 0.1.7
Package to generate biomass objective function stoichiometric coefficients from experimental data7 versions - Latest release: over 4 years ago - 1 dependent repositories - 42 downloads last month - 26 stars on GitHub - 1 maintainer
rbatools 1.0.3
Programming interface to resource allocation modelling with the Resource Balance Analysis (RBA) m...5 versions - Latest release: 12 months ago - 1 dependent repositories - 48 downloads last month - 2 stars on GitHub - 1 maintainer
mergem 1.1.0
mergem is a python package and command-line tool for merging, comparing, and translating genome-s...31 versions - Latest release: 3 months ago - 1 dependent repositories - 247 downloads last month - 5 stars on GitHub - 2 maintainers
Related Keywords
metabolic-models
2
microbial-communities
2
systems-biology
2
metabolism
2
cell biology
1
biochemistry
1
systems biology
1
computational biology
1
mathematical modeling
1
numerical simulation
1
bioinformatics
1
biotechnology
1
constraint-based-modeling
1
modeling
1
python
1
resource-allocation
1
simulation
1
whole-cell-modeling
1
sbml
1
molecular biology
1
resource allocation modellingResource Balance Analysis
1
metabolic-flux-analysis
1
machine-learning
1
biomass-objective-function
1
design
1
designmc
1
oxford-nanopore
1
human-genetics
1
genomics
1
genomic-data-analysis
1
genomes
1
genome-sequencing
1
genome-assembly
1
genome-analysis
1
smetana
1