Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
pypi.org "homology" keyword
thoraxe 0.8.0
Disentangle homology relationships between exons.15 versions - Latest release: over 1 year ago - 1 dependent repositories - 90 downloads last month - 10 stars on GitHub - 1 maintainer
r2g 1.0.5
A homology-based, computationally lightweight pipeline for discovering genes in the absence of an...6 versions - Latest release: over 3 years ago - 1 dependent repositories - 49 downloads last month - 49 stars on GitHub - 1 maintainer
udiph 0.0.2
Uniform distributed persistent homology.2 versions - Latest release: over 2 years ago - 1 dependent repositories - 15 downloads last month - 2 stars on GitHub - 1 maintainer
siblings 0.4.0
Siblings is a code base to compute homologs between genomes and make them publicly available thro...1 version - Latest release: about 9 years ago - 2 dependent repositories - 7 downloads last month - 1 maintainer
Top 5.2% on pypi.org
3 versions - Latest release: almost 3 years ago - 9 dependent repositories - 2.64 thousand downloads last month - 494 stars on GitHub - 3 maintainers
scikit-tda 1.0.0
Topological Data Analysis for humans3 versions - Latest release: almost 3 years ago - 9 dependent repositories - 2.64 thousand downloads last month - 494 stars on GitHub - 3 maintainers
alfpy 1.0.6
Alignment-free package to compare DNA/RNA/protein sequences (bioinformatics).4 versions - Latest release: about 6 years ago - 2 dependent packages - 1 dependent repositories - 98 downloads last month - 21 stars on GitHub - 1 maintainer
h-signature 0.0.5
Topological H-signature2 versions - Latest release: 9 months ago - 12 downloads last month - 1 maintainer
homcloud 4.4.1
HomCloud, persistent homology based data analysis package26 versions - Latest release: 3 months ago - 1 dependent repositories - 443 downloads last month - 1 maintainer
mogutda 0.4.1
Topological Data Analysis in Python16 versions - Latest release: 7 months ago - 2 dependent repositories - 81 downloads last month - 112 stars on GitHub - 1 maintainer
Top 5.4% on pypi.org
5 versions - Latest release: 3 months ago - 1 dependent package - 15 dependent repositories - 3.85 thousand downloads last month - 118 stars on GitHub - 3 maintainers
tadasets 0.2.1
Great data sets for Topological Data Analysis.5 versions - Latest release: 3 months ago - 1 dependent package - 15 dependent repositories - 3.85 thousand downloads last month - 118 stars on GitHub - 3 maintainers
h1s 2.2.18
Feature-aware orthology prediction tool28 versions - Latest release: over 3 years ago - 1 dependent repositories - 128 downloads last month - 8 stars on GitHub - 1 maintainer
hamstr1s 2.0.4
Feature-aware orthology prediction tool5 versions - Latest release: almost 4 years ago - 1 dependent repositories - 62 downloads last month - 8 stars on GitHub - 1 maintainer
cripser 0.0.13
Cubical Ripser Python binding6 versions - Latest release: 4 months ago - 274 downloads last month - 37 stars on GitHub - 1 maintainer
Related Keywords
tda
4
topology
4
bioinformatics
4
orthology-inference
3
topological-data-analysis
3
orthology
3
python
2
homology-search
2
algebraic topology
2
persistent
2
data
1
numerics
1
mogutda
1
robotics
1
phylogeny
1
protein
1
DNA
1
sequence
1
alignment-free
1
tda-python
1
package
1
topological data analysis
1
data sets
1
test data
1
bottleneck-distance
1
persistence-diagrams
1
persistence-image
1
persistence-images
1
sliced-wasserstein-distance
1
TDA
1
topological
1
image
1
volume
1
persistent-homology
1
orthologous exons
1
protein isoforms
1
gene transcripts
1
alternative-splicing
1
exon
1
protein-evolution
1
bioinformatics-pipeline
1
gene-sequence-retrieval
1
ncbi-sra
1
phylogenetics
1
filtration
1
machine-learning
1
simplicial-complex
1
homologs
1
Smith-Waterman
1
resource
1
REST
1
topology data analysis
1
unsupervised learning
1
persistent homology
1
persistence images
1
persistence diagrams
1
uniform manifold approximation and projection
1
sheaf theory
1
mapper
1
data visualization
1
scikit-tda
1
tda-libraries
1