Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
pypi.org "metagenomic-classification" keyword
taxpasta 0.6.1
TAXonomic Profile Aggregation and STAndardisation12 versions - Latest release: 8 months ago - 98 downloads last month - 27 stars on GitHub - 3 maintainers
prophyle 0.1.0
ProPhyle metagenomic classifier54 versions - Latest release: about 7 years ago - 1 dependent repositories - 918 downloads last month - 31 stars on GitHub - 1 maintainer
gtnet 0.1.0
A package for running Genome Taxonomy Network predictions8 versions - Latest release: 3 months ago - 1 dependent repositories - 81 downloads last month - 1 stars on GitHub - 2 maintainers
flextaxd 0.1.5
Script that allows the creation of custom kraken databases from various sources (NCBI, QIIME, Can...1 version - Latest release: over 4 years ago - 2 dependent repositories - 16 downloads last month - 60 stars on GitHub - 1 maintainer
Related Keywords
metagenomics
3
taxonomic-classification
2
taxonomic-classifications
2
python
2
taxonomy
2
classification
2
bioinformatics
2
reproducible-research
1
machine-learning
1
metagenomic-analysis
1
open-science
1
merging
1
neural-network
1
NCBI
1
CanSNPer
1
customization
1
GTDB
1
16s
1
amplicon
1
centrifuge
1
custom-database
1
custom-taxonomy
1
ganon
1
gtdb
1
kraken2
1
krakenuniq
1
ncbi-database
1
ncbi-taxonomy
1
metagenomic profile
1
profiling
1
standardisation
1
taxonomic profile
1
taxonomic-profiling
1
NGS
1
bacteria
1
burrows-wheeler-transform
1
bwt
1
k-mers
1
phylogenetic-compression
1
phylogeny
1
prophyle
1
simplitigs
1
viruses
1
microbiome
1
microbial-taxonomy
1
cross-platform
1
open-data
1
data-format
1
open-source
1