Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
pypi.org "16s" keyword
mtags 1.0.4
mTAGs - taxonomic profiling using degenerate consensus reference sequences of ribosomal RNA gene.2 versions - Latest release: over 2 years ago - 1 dependent repositories - 8 downloads last month - 6 stars on GitHub - 1 maintainer
flextaxd 0.1.5
Script that allows the creation of custom kraken databases from various sources (NCBI, QIIME, Can...1 version - Latest release: over 4 years ago - 2 dependent repositories - 16 downloads last month - 60 stars on GitHub - 1 maintainer
phylotoast 1.3.0
Tools for phylogenetic data analysis including visualization and cluster-computing support.1 version - Latest release: over 8 years ago - 2 dependent repositories - 22 downloads last month - 12 stars on GitHub - 1 maintainer
mothulity 1.8.0
Easy-to-use tool facilitating work with Mothur.7 versions - Latest release: over 4 years ago - 1 dependent repositories - 26 downloads last month - 3 stars on GitHub - 1 maintainer
hundo 1.2.8
Amplicon processing protocol31 versions - Latest release: almost 5 years ago - 1 dependent repositories - 202 downloads last month - 14 stars on GitHub - 1 maintainer
focusdb 0.3.74
Draft genome reassembly using riboSeed, for the construction of high resolution 16S databases54 versions - Latest release: over 4 years ago - 1 dependent repositories - 158 downloads last month - 0 stars on GitHub - 1 maintainer
qiime-tools 1.1.2
Useful additions to the QIIME analysis pipeline including tools for data visualization and cluste...3 versions - Latest release: over 9 years ago - 3 dependent repositories - 41 downloads last month - 12 stars on GitHub - 1 maintainer
Related Keywords
bioinformatics
4
16S
3
microbiology
2
microbial ecology
2
computational-biology
2
QIIME
2
cross-platform
2
hpc
2
microbial-genomics
2
microbiome
2
microbiome-analysis
2
pbs
2
phylogenetics
2
python
2
qiime
2
slurm
2
visualization
2
metagenomics
2
mothur
1
diversity
1
microbial-communities
1
microbial-ecology
1
16s-rrna
1
its
1
microbial
1
fungal
1
easy-to-use
1
assembly
1
database
1
ngs
1
alignment
1
metabarcoding
1
vsearch
1
taxonomy
1
NCBI
1
CanSNPer
1
customization
1
GTDB
1
amplicon
1
centrifuge
1
custom-database
1
custom-taxonomy
1
ganon
1
gtdb
1
kraken2
1
krakenuniq
1
metagenomic-classification
1
ncbi-database
1
ncbi-taxonomy
1
taxonomic-classification
1
taxonomic-classifications
1
phylotoast
1