Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
pypi.org "k-mers" keyword
panfeed 1.5.1
Compute gene-cluster specific k-mers over a pangenome9 versions - Latest release: 11 months ago - 1 dependent repositories - 187 downloads last month - 8 stars on GitHub - 1 maintainer
spacegraphcats 2.1.2
tools for biological assembly graph neighborhood analysis15 versions - Latest release: over 1 year ago - 1 dependent repositories - 65 downloads last month - 117 stars on GitHub - 1 maintainer
strainscan 1.0.14
One efficient and accurate strain-level microbiome composition analysis tool based on reference g...14 versions - Latest release: 7 months ago - 1 dependent repositories - 79 downloads last month - 30 stars on GitHub - 1 maintainer
prophyle 0.1.0
ProPhyle metagenomic classifier54 versions - Latest release: about 7 years ago - 1 dependent repositories - 918 downloads last month - 31 stars on GitHub - 1 maintainer
kmergenerator 0.0.4
Get a kmer list given a single DNA or RNA sequence.4 versions - Latest release: almost 4 years ago - 1 dependent repositories - 31 downloads last month - 2 stars on GitHub - 1 maintainer
Related Keywords
metagenomics
3
bioinformatics
2
rna-sequence
1
python
1
kmer-generator
1
iupac-convention
1
dna-sequences
1
Biological-Sequences
1
DNA-Sequences
1
viruses
1
simplitigs
1
prophyle
1
phylogeny
1
phylogenetic-compression
1
metagenomic-classification
1
bwt
1
burrows-wheeler-transform
1
bacteria
1
NGS
1
classification
1
strains
1
reference-based
1
bacterial-genomes
1
k-mer-counting
1
gwas
1