Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
pypi.org "paired-end" keyword
pyscaf 0.12a4
Genome assembly scaffolding using information from paired-end/mate-pair libraries, long reads, an...5 versions - Latest release: over 7 years ago - 1 dependent repositories - 31 downloads last month - 24 stars on GitHub - 1 maintainer
pandoo 0.3.3
Pandoo: a pipeline of tools for bacterial genomics.34 versions - Latest release: over 4 years ago - 1 dependent repositories - 38 downloads last month - 1 stars on GitHub - 1 maintainer
dysgu 1.6.3
Structural variant calling28 versions - Latest release: about 2 months ago - 1 dependent repositories - 954 downloads last month - 85 stars on GitHub - 1 maintainer
redundans 0.13a5
Redundans is a pipeline that assists an assembly of heterozygous/polymorphic genomes.6 versions - Latest release: over 7 years ago - 1 dependent repositories - 50 downloads last month - 107 stars on GitHub - 1 maintainer
Related Keywords
assembly
3
genomics
2
bioinformatics
2
contigs
2
pipeline
2
genome
2
synteny
2
scaffolding
2
long-reads
2
variant
1
variant-calling
1
heterozygous
1
reduction
1
assembled-contigs
1
closing
1
docker-image
1
fasta
1
gap
1
genome-assembly
1
mate-pairs
1
polymorphic
1
python
1
structural-variation
1
structural
1
long-read
1
tree
1
short-read
1
isolate
1
microbial genomics
1
public health microbiology
1
reads
1
assemblies
1
bacteria
1
ruffus
1
reference
1