Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
pypi.org "long-read" keyword
mccloud-cli 0.0.8
A command line to assist McCloud users.8 versions - Latest release: over 2 years ago - 1 dependent repositories - 58 downloads last month - 269 stars on GitHub - 2 maintainers
isonclust 0.0.6
De novo clustering of long-read transcriptome reads.7 versions - Latest release: over 4 years ago - 1 dependent repositories - 92 downloads last month - 42 stars on GitHub - 1 maintainer
swan-vis 1.0.3
swan is a tool for visualizing and analyzing transcript isoforms14 versions - Latest release: almost 4 years ago - 1 dependent repositories - 65 downloads last month - 46 stars on GitHub - 1 maintainer
lafite 1.0.2
Nanopore Direct RNA-seq Transcriptome Assembly4 versions - Latest release: over 1 year ago - 1 dependent repositories - 16 downloads last month - 3 stars on GitHub - 1 maintainer
tmerge 2.0.3
Merge transcriptome read-to-genome alignments into non-redundant transcript models.4 versions - Latest release: almost 4 years ago - 1 dependent repositories - 30 downloads last month - 0 stars on GitHub - 1 maintainer
preqc-lr 1.2
Quality control tool for long read sequencing data2 versions - Latest release: over 6 years ago - 1 dependent repositories - 18 downloads last month - 4 stars on GitHub - 1 maintainer
preqclr 2.0
Quality control tool for long read sequencing data1 version - Latest release: about 6 years ago - 1 dependent repositories - 16 downloads last month - 4 stars on GitHub - 1 maintainer
isocon 0.3.3
Pipeline for obtaining non-redundant haplotype specific transcript isoforms using PacBio IsoSeq r...6 versions - Latest release: about 4 years ago - 1 dependent repositories - 51 downloads last month - 13 stars on GitHub - 1 maintainer
dysgu 1.6.3
Structural variant calling28 versions - Latest release: about 2 months ago - 1 dependent repositories - 954 downloads last month - 85 stars on GitHub - 1 maintainer
Related Keywords
bioinformatics
7
transcriptome
5
oxford-nanopore
4
pacbio
4
pacbio-iso-seq
3
clustering
2
transcript
2
Nanopore
2
PacBio
2
CCS
2
Iso-Seq
2
nanopore
2
quality
2
minimap2
2
rna-seq-pipeline
1
sequencing-rna
1
tgs
1
rna-seq-data
1
pacbioreadsconnection
1
ont
1
bioinformatics-tool
1
bioinformatics-pipeline
1
assembly
1
ccs
1
error-correction
1
long-reads
1
genomics
1
paired-end
1
structural
1
structural-variation
1
variant
1
variant-calling
1
de-novo
1
dna
1
sequencing
1
Oxford
1
Technologies
1
swan
1
transcription
1
isoform
1
visualization
1
DRS
1
direct-rna-sequencing
1
transcriptome-assembly
1
tmerge
1
merge
1
transcriptomics
1
stringtie2
1
rna-seq
1
rnaseq
1
long-read-rna
1