rna 2 structure-prediction 2 biology 1 prediction 1 prediction-algorithm 1 pseudoknot 1 rna-secondary-structure 1 rna-secondary-structure-prediction 1 rna-structure 1 secondary-structure 1 secondary-structure-prediction 1 single-sequence 1 structural-biology 1 structure 1 dna 1 dna-folding 1 dna-structure-prediction 1 folding 1 rna-folding 1 RNA 1 secondary structure 1 language model 1 tertiary structure prediction 1 splice site prediction 1 IRES identification 1 multi-modal language model 1 ires-identifiaction 1 ncrna-classification 1 rna-foundation-model 1 rna-tertiary-structure 1 splice-site-prediction 1 structure-guided-pretraining 1 zero-shot-inferences 1 2d 1 alignment 1 bioinformatics 1 bioinformatics-tool 1 biological-data-analysis 1