Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
pypi.org "tuberculosis" keyword
tbpore 0.7.0
Mycobacterium tuberculosis genomic analysis from Nanopore sequencing data11 versions - Latest release: 8 months ago - 1 dependent repositories - 80 downloads last month - 11 stars on GitHub - 1 maintainer
tb-variant-filter 0.4.0
This tool offers multiple options for filtering variants (in VCF files, relative to M. tuberculos...7 versions - Latest release: 10 months ago - 1 dependent repositories - 67 downloads last month - 6 stars on GitHub - 1 maintainer
fast-lineage-caller 0.3.1
Module to call Mycobacterium tuberculosis lineages4 versions - Latest release: almost 4 years ago - 1 dependent repositories - 37 downloads last month - 12 stars on GitHub - 1 maintainer
vsnpdev 0.0.21
USDA APHIS Veterinary Services (VS) Mycobacterium tuberculosis complex, mainly M. bovis, and Bruc...19 versions - Latest release: over 4 years ago - 1 dependent repositories - 95 downloads last month - 18 stars on GitHub - 1 maintainer
tbvcfreport 0.1.7
Parses SnpEff generated VCF and generates an HTML report.2 versions - Latest release: almost 5 years ago - 1 dependent repositories - 15 downloads last month - 2 stars on GitHub - 1 maintainer
crisprbuilder-tb 0.1.47
Collect and annotate Mycobacterium tuberculosis WGS data for CRISPR investigations.9 versions - Latest release: almost 4 years ago - 1 dependent repositories - 60 downloads last month - 0 stars on GitHub - 1 maintainer
Related Keywords
genomics
2
bioinformatics
2
vcf
2
mycobacterium-tuberculosis
2
nanopore
1
pipeline
1
snp
1
snps
1
wgs
1
whole-genome-sequencing
1
neo4j
1
h37rv
1
snpeff
1
combat-tb-neodb
1
galaxy-project
1
variant-annotations
1
vcf-files
1
CRISPR
1
bio-informatics
1
package
1
diagnostics
1
variant-calling
1
resistance-prediction
1
drug-resistance-prediction
1
Mycobacterium
1
lineage
1
calling
1
lineage-call
1
analysis-pipeline
1
bam-files
1
brucella
1
freebayes
1
high
1
high-throughput-sequencing
1
mycobacterium-tuberculosis-complex
1
phylogenetics
1