pypi.org "wgs" keyword
View the packages on the pypi.org package registry that are tagged with the "wgs" keyword.
mgrspy 0.3.1
Convert WGS84 coordinates to MGRS and back6 versions - Latest release: over 5 years ago - 1 dependent repositories - 602 downloads last month - 1 maintainer
doublehelix 1.0.0a7
Genomic data manipulation tool7 versions - Latest release: 6 months ago - 264 downloads last month - 2 stars on GitHub - 1 maintainer
tadrep 0.9.2
TaDRep: Targeted Detection and Reconstruction of Plasmids4 versions - Latest release: 12 months ago - 1 dependent repositories - 144 downloads last month - 20 stars on GitHub - 1 maintainer
pointblaster 0.2.6
find point mutation in assembled genomes15 versions - Latest release: about 1 month ago - 508 downloads last month - 0 stars on GitHub - 1 maintainer
echidna-sc 1.0.0
Mapping genotype to phenotype through joint probabilistic modeling of single-cell gene expression...1 version - Latest release: 4 months ago - 45 downloads last month - 0 stars on GitHub - 1 maintainer
sc-echidna 1.0.2
Mapping genotype to phenotype through joint probabilistic modeling of single-cell gene expression...3 versions - Latest release: 4 months ago - 125 downloads last month - 0 stars on GitHub - 1 maintainer
Top 7.9% on pypi.org
161 versions - Latest release: 24 days ago - 1 dependent package - 2 dependent repositories - 2.71 thousand downloads last month - 151 stars on GitHub - 4 maintainers
scout-browser 4.99.0
Clinical DNA variant visualizer and browser161 versions - Latest release: 24 days ago - 1 dependent package - 2 dependent repositories - 2.71 thousand downloads last month - 151 stars on GitHub - 4 maintainers
referenceseeker 1.8.0
ReferenceSeeker: rapid determination of appropriate reference genomes.12 versions - Latest release: over 3 years ago - 1 dependent repositories - 242 downloads last month - 89 stars on GitHub - 1 maintainer
cyrius 1.1.1
WGS-based CYP2D6 caller1 version - Latest release: over 1 year ago - 67 downloads last month - 51 stars on GitHub - 1 maintainer
campycps 1.0.3
Campylobacter CPS relevant gene analysis tool4 versions - Latest release: over 1 year ago - 151 downloads last month - 0 stars on GitHub - 1 maintainer
gis.geotransforms 0.1dev
Coordinate transforms between standards like UTM, MGRS, WGS1 version - Latest release: over 1 year ago - 2 dependent repositories - 1 maintainer
restidy 0.2.8
resfinder result tidy18 versions - Latest release: about 3 years ago - 1 dependent repositories - 347 downloads last month - 0 stars on GitHub - 1 maintainer
cvmcgmlst 0.2.6
cgMLST analysis tool12 versions - Latest release: about 2 months ago - 711 downloads last month - 0 stars on GitHub - 1 maintainer
phageboost 0.1.7
a Fast Prophage and Phage Predictor5 versions - Latest release: over 4 years ago - 1 dependent repositories - 136 downloads last month - 37 stars on GitHub - 1 maintainer
cb-platon 1.4.0
Platon: identification and characterization of bacterial plasmid contigs from short-read draft as...10 versions - Latest release: almost 5 years ago - 1 dependent repositories - 347 downloads last month - 98 stars on GitHub - 1 maintainer
doublehelix-microarray-templates 0.0.1a1
This repository contains the templates for microarray file generator1 version - Latest release: 10 months ago - 60 downloads last month - 0 stars on GitHub - 1 maintainer
metadownload 0.1.3
python mlst analysis tool4 versions - Latest release: over 2 years ago - 138 downloads last month - 1 maintainer
vsnpdev 0.0.21
USDA APHIS Veterinary Services (VS) Mycobacterium tuberculosis complex, mainly M. bovis, and Bruc...19 versions - Latest release: about 5 years ago - 1 dependent repositories - 292 downloads last month - 20 stars on GitHub - 1 maintainer
resblaster 0.4.5
find antimcirobial resistance genes on genomes35 versions - Latest release: 4 months ago - 1 dependent repositories - 319 downloads last month - 4 stars on GitHub - 1 maintainer
cvmblaster 1.0.1
find antimcirobial resistance genes41 versions - Latest release: about 1 year ago - 2 dependent packages - 1 dependent repositories - 1.03 thousand downloads last month - 0 stars on GitHub - 1 maintainer
cvmmlst 0.3.8
python mlst analysis tool26 versions - Latest release: 3 months ago - 675 downloads last month - 0 stars on GitHub - 1 maintainer
ore 0.2.1
Associate outliers with rare variation34 versions - Latest release: over 6 years ago - 1 dependent repositories - 573 downloads last month - 1 stars on GitHub - 1 maintainer
scechidna 1.0.0
Mapping genotype to phenotype through joint probabilistic modeling of single-cell gene expression...1 version - Latest release: 4 months ago - 0 stars on GitHub - 1 maintainer
wgse-ng 1.0.0a3 removed
Whole Genome Sequencing data manipulation tool17 versions - Latest release: 11 months ago - 1.74 thousand downloads last month - 2 stars on GitHub - 1 maintainer
Related Keywords
bioinformatics
7
ngs
4
cnv
4
pip
4
microbiology
3
scRNA
3
blastn
3
bacteria
3
science
3
microarray
3
genetics
3
whole-genome-sequencing
2
pubmlst
2
dna
2
vcf
2
outliers
2
mlst
2
rna
2
resfinder
2
plasmids
2
gis
2
mgrs
2
analysis-pipeline
1
bam-files
1
rna-seq
1
contigs
1
assembly
1
metagenomics
1
prophage
1
phage
1
machine learning
1
cgmlst
1
geo
1
geocoordinates
1
georeference
1
python3
1
outlier-detection
1
expression-analysis
1
cli
1
rare_variants
1
rnaseq
1
amr
1
tuberculosis
1
snps
1
snp
1
pipeline
1
phylogenetics
1
mycobacterium-tuberculosis-complex
1
high-throughput-sequencing
1
high
1
genomics
1
freebayes
1
brucella
1
Campylobacter CPS
1
phenopacket
1
panelapp
1
panel
1
ogm
1
matchmaker exchange
1
lrs
1
genome visualisation
1
fusion
1
coverage
1
clinvar
1
clingen-cgc-vicc
1
cancer
1
beacon
1
acmg
1
pointmutation
1
conversion
1
coordinate
1
pharmacogenomics
1
cyp2d6
1
CYP2D6
1
refseq
1
reference-genomes
1
mash
1
ani
1
microbial genomics
1
wts
1
wes
1
variants
1
variant triage
1
variant ranking
1
sv
1
str
1
snv
1
sma
1