Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
pypi.org "high-throughput-sequencing" keyword
gamtools 2.0.0
A package containing some utilities for analyzing GAM data.4 versions - Latest release: over 1 year ago - 1 dependent repositories - 43 downloads last month - 9 stars on GitHub - 1 maintainer
Top 4.7% on pypi.org
23 versions - Latest release: about 1 month ago - 1 dependent package - 5 dependent repositories - 11.5 thousand downloads last month - 130 stars on GitHub - 1 maintainer
geoparse 2.0.4
Python library to access Gene Expression Omnibus Database (GEO)23 versions - Latest release: about 1 month ago - 1 dependent package - 5 dependent repositories - 11.5 thousand downloads last month - 130 stars on GitHub - 1 maintainer
umitools 0.3.4
A toolset for handling sequencing data with unique molecular identifiers (UMIs)3 versions - Latest release: about 6 years ago - 2 dependent repositories - 64 downloads last month - 12 stars on GitHub - 1 maintainer
multiqc-plugins 1.2.1
MultiQC plugins for the Zavolan Lab @ University of Basel, Switzerland2 versions - Latest release: about 3 years ago - 2 dependent repositories - 21 downloads last month - 1 stars on GitHub - 1 maintainer
exposeq 4.5.0
A pacakge which provides various ways to analyze NGS data from phage display campaigns65 versions - Latest release: 3 months ago - 422 downloads last month - 0 stars on GitHub - 1 maintainer
htsinfer 0.2.0
HTSinfer infers metadata from High Throughput Sequencing (HTS) data1 version - Latest release: about 4 years ago - 1 dependent repositories - 17 downloads last month - 8 stars on GitHub - 1 maintainer
vsnpdev 0.0.21
USDA APHIS Veterinary Services (VS) Mycobacterium tuberculosis complex, mainly M. bovis, and Bruc...19 versions - Latest release: over 4 years ago - 1 dependent repositories - 95 downloads last month - 18 stars on GitHub - 1 maintainer
Related Keywords
bioinformatics
4
rna-seq
2
hacktoberfest
1
inference
1
high-throughput sequencing
1
ngs
1
rnaseq
1
phage-display
1
ngs-pipeline
1
clustering
1
antibody-sequencing
1
bioinformatics-tool
1
unique-molecular-identifier
1
umi
1
small-rna
1
RNA
1
umitools
1
chromatin
1
analysis-pipeline
1
bam-files
1
brucella
1
freebayes
1
genomics
1
high
1
mycobacterium-tuberculosis-complex
1
phylogenetics
1
pipeline
1
snp
1
snps
1
tuberculosis
1
vcf
1
wgs
1
whole-genome-sequencing
1
molecular-biology
1
python
1
python2
1
python3
1
GEOparse
1
GEO
1
Gene Expression Omnibus
1
Bioinformatics
1
Microarray
1
geo-database
1
htseq
1
microarray
1
rna-sequencing
1
RNA-seq
1
small
1
unique
1
molecular
1
identifier
1
UMI
1
PCR
1
duplicates
1
cycle
1
starting
1
material
1
sequencing
1
depth
1
high-throughput
1
deep
1
transcriptome
1
genome
1