Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
pypi.org "SBML" keyword
onemodel-gui 0.1.0
A graphical user interface for OneModel1 version - Latest release: almost 2 years ago - 16 downloads last month - 0 stars on GitHub - 1 maintainer
libsbne 0.0.6
LibSBNE Python API5 versions - Latest release: 7 months ago - 1 dependent package - 60 downloads last month - 1 stars on GitHub - 2 maintainers
biosimulators-pysces 0.1.25
BioSimulators-compliant command-line interface to the PySCeS simulation program <http://pysces.so...29 versions - Latest release: over 2 years ago - 2 dependent repositories - 305 downloads last month - 1 stars on GitHub - 4 maintainers
biosimulators-xpp 0.0.13
BioSimulators-compliant command-line interface to the XPP simulation program.13 versions - Latest release: about 2 years ago - 3 dependent repositories - 131 downloads last month - 0 stars on GitHub - 4 maintainers
qualitativemodelfitting 0.0.4
3 versions - Latest release: over 4 years ago - 1 dependent repositories - 24 downloads last month - 0 stars on GitHub - 1 maintainerlibsbmlnetwork 0.0.18
LibSBML Network Python API4 versions - Latest release: about 1 month ago - 651 downloads last month - 2 maintainers
biocrnpyler 1.1.1 💰
A chemical reaction network compiler for generating large biological circuit models8 versions - Latest release: over 2 years ago - 1 dependent repositories - 69 downloads last month - 34 stars on GitHub - 10 maintainers
biomodels 0.3.2
Download from the BioModels API5 versions - Latest release: 3 months ago - 2 dependent packages - 1 dependent repositories - 40 downloads last month - 2 stars on GitHub - 2 maintainers
autoreduce 0.2.0
Python based automated model reduction tools for SBML models5 versions - Latest release: over 1 year ago - 1 dependent repositories - 84 downloads last month - 4 stars on GitHub - 2 maintainers
fbc-curation 0.2.3
FBC reference files for SBML model curation.12 versions - Latest release: over 1 year ago - 1 dependent repositories - 64 downloads last month - 8 stars on GitHub - 1 maintainer
biosimulators-cbmpy 0.1.15
BioSimulators-compliant command-line interface to the CBMPy simulation program <http://cbmpy.sour...16 versions - Latest release: about 2 years ago - 3 dependent repositories - 175 downloads last month - 0 stars on GitHub - 2 maintainers
biosimulators-boolnet 0.1.18
BioSimulators-compliant command-line interface to the BoolNet simulation program.19 versions - Latest release: over 2 years ago - 2 dependent repositories - 175 downloads last month - 0 stars on GitHub - 4 maintainers
sbmlsim 0.2.2
sbmlsim are utilities for the simulation of SBML models.14 versions - Latest release: over 2 years ago - 1 dependent repositories - 116 downloads last month - 5 stars on GitHub - 1 maintainer
sbmlxdf 1.0.1
convert between SBML and tabular structures12 versions - Latest release: about 1 month ago - 1 dependent repositories - 148 downloads last month - 1 maintainer
biosimulators-rbapy 0.0.4
BioSimulators-compliant command-line interface to the RBApy simulation program.4 versions - Latest release: over 2 years ago - 3 dependent repositories - 37 downloads last month - 0 stars on GitHub - 2 maintainers
biosimulators-masspy 0.0.9
BioSimulators-compliant command-line interface to the MASSpy simulation program.9 versions - Latest release: about 2 years ago - 2 dependent repositories - 106 downloads last month - 1 stars on GitHub - 4 maintainers
libsbmlnetworkeditor 0.0.14
LibSBML Network Editor Python API13 versions - Latest release: about 2 months ago - 2 dependent packages - 1 dependent repositories - 131 downloads last month - 2 maintainers
biosimulators-ginsim 0.0.9
BioSimulators-compliant command-line interface to the GINsim simulation program.9 versions - Latest release: over 2 years ago - 2 dependent repositories - 74 downloads last month - 0 stars on GitHub - 3 maintainers
mod_sbml 0.2.3
Utilities for working with metabolic models in SBML format.3 versions - Latest release: about 7 years ago - 5 dependent repositories - 16 downloads last month - 3 stars on GitHub - 2 maintainers
augusta 1.0.5
Python package for inference of the gene regulatory network and the boolean network using RNA-Seq...7 versions - Latest release: 4 months ago - 14 downloads last month - 2 stars on GitHub - 2 maintainers
biosimulations-bigg 0.0.5
Command-line program for publishing the BiGG model repository to BioSimulations.5 versions - Latest release: about 2 years ago - 1 dependent repositories - 37 downloads last month - 1 stars on GitHub - 4 maintainers
biosimulators-amici 0.1.24
BioSimulators-compliant command-line interface to the AMICI simulation program <https://github.co...29 versions - Latest release: 11 months ago - 2 dependent repositories - 168 downloads last month - 2 stars on GitHub - 4 maintainers
subsbml 0.9.0
SBML subsystem interaction modeling toolbox in Python1 version - Latest release: over 3 years ago - 1 dependent repositories - 9 downloads last month - 5 stars on GitHub - 2 maintainers
yaml2sbml 0.2.5
A small package to convert ODEs specified in a YAML file to SBML/PEtab6 versions - Latest release: almost 3 years ago - 1 dependent package - 1 dependent repositories - 49 downloads last month - 12 stars on GitHub - 1 maintainer
sbml2dae 0.1.7
A customizable SBML to Matlab parser4 versions - Latest release: over 1 year ago - 1 dependent package - 6 dependent repositories - 27 downloads last month - 0 stars on GitHub - 1 maintainer
onemodel-cli 0.1.0
A command-line interface for OneModel1 version - Latest release: almost 2 years ago - 2 dependent repositories - 10 downloads last month - 0 stars on GitHub - 2 maintainers
biosimulators-libsbmlsim 0.0.6
BioSimulators-compliant command-line interface to LibSBMLsim <http://fun.bio.keio.ac.jp/software/...6 versions - Latest release: over 2 years ago - 3 dependent repositories - 41 downloads last month - 0 stars on GitHub - 4 maintainers
cno 0.1.4
CNO (Cell Net Optimiser): Manipulate, Visualise and Optimise Biological Networks to Perturbation ...5 versions - Latest release: about 8 years ago - 2 dependent repositories - 23 downloads last month - 10 stars on GitHub - 2 maintainers
sb2l 0.1.3
sb2l Translates the biological models written in SBML into LaTeX code to be compiled and read by ...2 versions - Latest release: over 4 years ago - 1 dependent repositories - 9 downloads last month - 1 stars on GitHub - 2 maintainers
bioscrape 1.2.2
Biological Stochastic Simulation of Single Cell Reactions and Parameter Estimation9 versions - Latest release: about 1 year ago - 1 dependent repositories - 83 downloads last month - 18 stars on GitHub - 3 maintainers
biosimulators-tellurium 0.1.42
BioSimulators-compliant command-line interface to the tellurium simulation program <http://tellur...39 versions - Latest release: 9 months ago - 3 dependent repositories - 277 downloads last month - 1 stars on GitHub - 4 maintainers
sbmlutils 0.8.7
sbmlutils are utilities for working with SBML.59 versions - Latest release: 8 months ago - 1 dependent package - 3 dependent repositories - 208 downloads last month - 35 stars on GitHub - 1 maintainer
kisao 2.15.3
Utilities for working with the Kinetic Simulation Algorithm Ontology (KiSAO)21 versions - Latest release: about 3 years ago - 5 dependent packages - 20 dependent repositories - 3.3 thousand downloads last month - 9 stars on GitHub - 4 maintainers
simbio 0.4.0 💰
Simulation of Biological Systems10 versions - Latest release: 30 days ago - 2 dependent packages - 3 dependent repositories - 65 downloads last month - 6 stars on GitHub - 1 maintainer
antimonycombinations 0.0.3
3 versions - Latest release: over 4 years ago - 19 downloads last month - 0 stars on GitHub - 1 maintainer
Related Keywords
sbml
15
sed-ml
13
SED-ML
13
systems biology
12
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12
computational biology
11
omex
11
biosimulators
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10
OMEX
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5
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4
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3
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fba
2
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2
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CellNOptR
1
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1
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1
libsbmlsim
1
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1
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1
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1
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michaelis menten
1
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biochemical-networks
1
kinetic modeling
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stochastic-simulation-algorithm
1
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CRN simulator
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resource-balance-analysis
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rba
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RBApy
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RBA
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resource balance analysis
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sbml-simulation
1