Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
pypi.org "sed-ml" keyword
biosimulators-libsbmlsim 0.0.6
BioSimulators-compliant command-line interface to LibSBMLsim <http://fun.bio.keio.ac.jp/software/...6 versions - Latest release: over 2 years ago - 3 dependent repositories - 64 downloads last month - 0 stars on GitHub - 2 maintainers
biosimulators-utils 0.1.187
Command-line program and library for reading, writing, validating and executing modeling projects...179 versions - Latest release: 3 months ago - 4 dependent packages - 4 dependent repositories - 3.74 thousand downloads last month - 5 stars on GitHub - 2 maintainers
biosimulators-test-suite 0.1.88
Tools for validating that biosimulation tools are consistent with the BioSimulators standards88 versions - Latest release: 10 months ago - 1 dependent repositories - 575 downloads last month - 7 stars on GitHub - 2 maintainers
biosimulators-tellurium 0.1.42
BioSimulators-compliant command-line interface to the tellurium simulation program <http://tellur...39 versions - Latest release: 9 months ago - 3 dependent repositories - 212 downloads last month - 1 stars on GitHub - 2 maintainers
biosimulators-copasi 0.1.35
BioSimulators-compliant command-line interface to the COPASI simulation program <http://copasi.org>.35 versions - Latest release: about 2 years ago - 2 dependent repositories - 330 downloads last month - 2 stars on GitHub - 2 maintainers
kisao 2.15.3
Utilities for working with the Kinetic Simulation Algorithm Ontology (KiSAO)21 versions - Latest release: about 3 years ago - 5 dependent packages - 20 dependent repositories - 2.33 thousand downloads last month - 9 stars on GitHub - 2 maintainers
biomodels 0.3.2
Download from the BioModels API5 versions - Latest release: 4 months ago - 2 dependent packages - 1 dependent repositories - 40 downloads last month - 2 stars on GitHub - 1 maintainer
biosimulators-xpp 0.0.13
BioSimulators-compliant command-line interface to the XPP simulation program.13 versions - Latest release: about 2 years ago - 3 dependent repositories - 131 downloads last month - 0 stars on GitHub - 2 maintainers
biosimulators-pyneuroml 0.0.16
BioSimulators-compliant command-line interface to the jNeuroML/pyNeuroML, NEURON, and NetPyNe sim...16 versions - Latest release: about 2 years ago - 2 dependent repositories - 126 downloads last month - 2 stars on GitHub - 2 maintainers
biosimulators-opencor 0.0.13
BioSimulators-compliant command-line interface to the OpenCOR simulation program.12 versions - Latest release: over 2 years ago - 1 dependent repositories - 112 downloads last month - 1 stars on GitHub - 2 maintainers
biosimulators-pysces 0.1.25
BioSimulators-compliant command-line interface to the PySCeS simulation program <http://pysces.so...29 versions - Latest release: over 2 years ago - 2 dependent repositories - 305 downloads last month - 1 stars on GitHub - 2 maintainers
biosimulators-masspy 0.0.9
BioSimulators-compliant command-line interface to the MASSpy simulation program.9 versions - Latest release: about 2 years ago - 2 dependent repositories - 106 downloads last month - 1 stars on GitHub - 2 maintainers
biosimulators-gillespy2 0.1.37
BioSimulators-compliant command-line interface to the GillesPy2 simulation program.31 versions - Latest release: about 2 years ago - 3 dependent repositories - 465 downloads last month - 1 stars on GitHub - 2 maintainers
biosimulators-boolnet 0.1.18
BioSimulators-compliant command-line interface to the BoolNet simulation program.19 versions - Latest release: over 2 years ago - 2 dependent repositories - 175 downloads last month - 0 stars on GitHub - 2 maintainers
biosimulations-bigg 0.0.5
Command-line program for publishing the BiGG model repository to BioSimulations.5 versions - Latest release: about 2 years ago - 1 dependent repositories - 37 downloads last month - 1 stars on GitHub - 2 maintainers
biosimulators-cobrapy 0.1.23
BioSimulators-compliant command-line interface to the COBRApy simulation program <https://opencob...24 versions - Latest release: about 2 years ago - 3 dependent repositories - 223 downloads last month - 2 stars on GitHub - 2 maintainers
biosimulators-amici 0.1.24
BioSimulators-compliant command-line interface to the AMICI simulation program <https://github.co...29 versions - Latest release: 11 months ago - 2 dependent repositories - 168 downloads last month - 2 stars on GitHub - 2 maintainers
biosimulations-modeldb 0.0.4
Command-line program for publishing the ModelDB model repository to BioSimulations.3 versions - Latest release: about 2 years ago - 37 downloads last month - 0 stars on GitHub - 1 maintainer
biosimulators-cbmpy 0.1.15
BioSimulators-compliant command-line interface to the CBMPy simulation program <http://cbmpy.sour...16 versions - Latest release: about 2 years ago - 3 dependent repositories - 175 downloads last month - 0 stars on GitHub - 2 maintainers
biosimulators-bionetgen 0.1.20
BioSimulators-compliant command-line interface to the BioNetGen simulation program <https://bione...21 versions - Latest release: about 2 years ago - 3 dependent repositories - 53 downloads last month - 1 stars on GitHub - 3 maintainers
biosimulators-rbapy 0.0.4
BioSimulators-compliant command-line interface to the RBApy simulation program.4 versions - Latest release: over 2 years ago - 3 dependent repositories - 37 downloads last month - 0 stars on GitHub - 2 maintainers
biosimulators-ginsim 0.0.9
BioSimulators-compliant command-line interface to the GINsim simulation program.9 versions - Latest release: over 2 years ago - 2 dependent repositories - 74 downloads last month - 0 stars on GitHub - 3 maintainers
Related Keywords
biosimulators
19
systems-biology
18
combine
16
systems biology
15
omex
15
computational-biology
15
SED-ML
15
sbml
13
OMEX
13
COMBINE
13
SBML
13
computational biology
13
BioSimulators
13
simulation
12
numerical simulation
10
omex-metadata
6
docker
6
combine-archive
6
biochemical-networks
6
numerical-simulation
6
mathematical-model
5
modeling
5
mathematical-modeling
5
python
5
dynamical-modeling
4
mathematical model
4
kinetic model
4
systems
4
biology
4
flux-balance-analysis
3
kisao
3
fba
3
reaction network
2
xpp
2
XPP
2
stochastic-simulation-algorithm
2
logical model
2
cell-biology
2
biosimulations
2
metabolism
2
kinetic modeling
2
mathematical modeling
2
cellml
2
mathematical-modelling
2
ModelDB
1
electrophysiology
1
sbml-qual
1
neuroscience
1
constraint-based-modeling
1
cobrapy
1
bigg
1
BiGG
1
Systems Biology Markup Language
1
libsbmlsim
1
qualitative-modeling
1
logical-modeling
1
ginsim
1
GINsim
1
resource-balance-analysis
1
rba
1
biochemistry
1
RBApy
1
RBA
1
resource balance analysis
1
rule-based-modeling
1
network-free-simulation
1
bionetgen
1
BioNetGen
1
network-free simulation
1
rule-based modeling
1
neuron
1
modeldb
1
research
1
simulator
1
stochastic
1
libroadrunner
1
tellurium
1
copasi
1
algorithm
1
ontology
1
KiSAO
1
biomodels
1
computational neuroscience
1
dynamical modeling
1
NeuroML
1
LEMS
1
computational-neuroscience
1
neuroml
1
CellML
1
OpenCOR
1
biochemical-network
1
kinetic-model
1
MASSpy
1
reaction-network
1
gillespy2
1
stochkit
1
stochss
1
BoolNet
1
logical-model
1
biochemical network
1