pypi.org "dna-sequences" keyword
View the packages on the pypi.org package registry that are tagged with the "dna-sequences" keyword.
intervene 0.6.5
A tool for intersection and visualization of multiple gene or genomic region sets19 versions - Latest release: over 4 years ago - 1 dependent repositories - 479 downloads last month - 139 stars on GitHub - 1 maintainer
helical 0.0.1a27
Helical Python SDK26 versions - Latest release: 26 days ago - 1.8 thousand downloads last month - 107 stars on GitHub - 2 maintainers
kmergenerator 0.0.4
Get a kmer list given a single DNA or RNA sequence.4 versions - Latest release: over 4 years ago - 1 dependent repositories - 158 downloads last month - 2 stars on GitHub - 1 maintainer
graph-part 1.0.2
Graph-based partitioning of biological sequence data5 versions - Latest release: almost 2 years ago - 2 dependent packages - 1 dependent repositories - 217 downloads last month - 26 stars on GitHub - 1 maintainer
Top 9.0% on pypi.org
101 versions - Latest release: 6 months ago - 1 dependent repositories - 5.27 thousand downloads last month - 473 stars on GitHub - 1 maintainer
enformer-pytorch 0.8.10
Enformer - Pytorch101 versions - Latest release: 6 months ago - 1 dependent repositories - 5.27 thousand downloads last month - 473 stars on GitHub - 1 maintainer
kspider 2.3.2
A simple yet powerful sequence clustering tool10 versions - Latest release: about 2 years ago - 1 dependent repositories - 814 downloads last month - 8 stars on GitHub - 1 maintainer
filter-classified-reads 0.2.1
Filter for reads from taxa of interest using Kraken2/Centrifuge classification results3 versions - Latest release: over 4 years ago - 1 dependent repositories - 76 downloads last month - 7 stars on GitHub - 1 maintainer
pymer 0.3.3
pymer: Pythonic fast k-mer counting routines13 versions - Latest release: almost 8 years ago - 3 dependent repositories - 302 downloads last month - 0 stars on GitHub - 1 maintainer
dnazip-bioinfo 0.2
A Python implementation of the Burros-Wheeler and Huffman coding algorithms2 versions - Latest release: about 4 years ago - 1 dependent repositories - 60 downloads last month - 4 stars on GitHub - 1 maintainer
crazydoc 0.2.1
Read genetic sequences from stylized docx files7 versions - Latest release: 19 days ago - 1 dependent package - 1 dependent repositories - 358 downloads last month - 32 stars on GitHub - 1 maintainer
sequenticon 0.1.6
Generate human-friendly icons from DNA sequences6 versions - Latest release: 18 days ago - 1 dependent package - 1 dependent repositories - 35.1 thousand downloads last month - 37 stars on GitHub - 1 maintainer
scadnano 0.20.0
Python scripting library for generating designs readable by scadnano.68 versions - Latest release: 19 days ago - 1 dependent package - 3 dependent repositories - 1.26 thousand downloads last month - 15 stars on GitHub - 2 maintainers
scadnano-test 0.17.1
Python scripting library for generating designs readable by scadnano.2 versions - Latest release: over 3 years ago - 1 dependent repositories - 77 downloads last month - 15 stars on GitHub - 1 maintainer
haplodynamics 0.4b1
A python library to develop genomic data simulators16 versions - Latest release: over 1 year ago - 382 downloads last month - 3 stars on GitHub - 1 maintainer
pygtftk 1.6.2
The Python GTF toolkit (pygtftk) package: easy handling of GTF files26 versions - Latest release: about 3 years ago - 1 dependent repositories - 698 downloads last month - 45 stars on GitHub - 1 maintainer
kspider2 2.0.1
kSpider Python interface2 versions - Latest release: almost 4 years ago - 1 dependent repositories - 127 downloads last month - 8 stars on GitHub - 1 maintainer
pacmill 0.6.1
The `pacmill` python package is a bioinformatics pipeline that is developed to process microbial ...7 versions - Latest release: almost 4 years ago - 1 dependent repositories - 162 downloads last month - 1 stars on GitHub - 1 maintainer
crest4 4.3.7
The `crest4` python package can automatically assign taxonomic names to DNA sequences obtained fr...32 versions - Latest release: about 1 year ago - 1 dependent repositories - 450 downloads last month - 5 stars on GitHub - 1 maintainer
Top 9.8% on pypi.org
17 versions - Latest release: about 5 years ago - 2 dependent packages - 2 dependent repositories - 499 downloads last month - 49 stars on GitHub - 1 maintainer
benchlingapi 2.1.12
An unofficial python wrapper for the Benchling API17 versions - Latest release: about 5 years ago - 2 dependent packages - 2 dependent repositories - 499 downloads last month - 49 stars on GitHub - 1 maintainer
predsim 0.7.0
Command-line tool for simulating predictive datasets from MrBayes' output.9 versions - Latest release: almost 6 years ago - 1 dependent repositories - 302 downloads last month - 2 stars on GitHub - 1 maintainer
crispr-cas9 0.3.4
script for indels counting in sequencing data6 versions - Latest release: almost 4 years ago - 1 dependent repositories - 132 downloads last month - 4 stars on GitHub - 1 maintainer
convertfq 0.1.0
convertFQ is used to convert either DNA2RNA or RNA2DNA in a fastq file1 version - Latest release: almost 3 years ago - 34 downloads last month - 0 stars on GitHub - 1 maintainer
Related Keywords
bioinformatics
7
dna
4
genomics
3
python
3
rna-seq
3
clustering
2
vcf
2
transformer
2
simulation
2
protein
2
skipmers
2
cadnano
2
gene-expression
2
dna-origami
2
deep-learning
2
dna-structures
2
artificial-intelligence
2
taxonomic-classification
2
16s-rrna
2
synthetic-biology
2
gene
1
exon
1
chip-seq
1
kmer
1
genomic
1
gtf
1
intron
1
ngs
1
splicing
1
transcriptomics
1
allele-frequencies
1
genomics-data
1
gwas
1
gwas-dataset
1
hardy-weinberg-equilibrium
1
linkage-disequilibrium
1
microarray-data
1
population-genetics
1
population-genomics
1
simulator
1
vcf-files
1
GTF
1
BED
1
bed
1
bigwig
1
cds
1
metagenomics
1
fastq
1
converter
1
virology
1
python3
1
ngs-analysis
1
deep-sequencing
1
crispr-cas9
1
NGS
1
sequencing
1
indels
1
seq-gen
1
posterior-predictive
1
mrbayes
1
molecular-evolution
1
dendropy
1
bayesian
1
Bayesian
1
phylogenetics
1
MrBayes
1
DendroPy
1
Seq-Gen
1
predictive
1
api-wrapper
1
pdf-reports
1
pacbio-data
1
bioinformatics-pipeline
1
tts
1
tss
1
transcript
1
filtering
1
bioinformatics-scripts
1
filter_classified_reads
1
attention-mechanism
1
artificial intelligence
1
train-test-split
1
protein-sequences
1
machine-learning
1
rna-sequence
1
kmer-generator
1
iupac-convention
1
Biological-Sequences
1
DNA-Sequences
1
k-mers
1
rnaseq
1
pre-training
1
pre-trained-model
1
neural-networks
1
foundation-models
1
data
1
biology
1
visualization
1
venn-diagram
1
pyton
1