pypi.org "motif" keyword
View the packages on the pypi.org package registry that are tagged with the "motif" keyword.
Top 1.5% on pypi.org
29 versions - Latest release: 9 months ago - 14 dependent packages - 79 dependent repositories - 299 thousand downloads last month - 3,611 stars on GitHub - 1 maintainer
stumpy 1.13.0
A powerful and scalable library that can be used for a variety of time series data mining tasks29 versions - Latest release: 9 months ago - 14 dependent packages - 79 dependent repositories - 299 thousand downloads last month - 3,611 stars on GitHub - 1 maintainer
motif-scraper 1.0.3
Tool for finding degenerate motifs in FASTA files4 versions - Latest release: almost 3 years ago - 2 dependent repositories - 157 downloads last month - 12 stars on GitHub - 1 maintainer
graphlet 0.1.1
Graphlet AI Knowledge Graph Factory1 version - Latest release: over 2 years ago - 59 downloads last month - 28 stars on GitHub - 1 maintainer
motiflets 0.5.1
Motiflets - Simple and Accurate Detection of Motifs in Time Series18 versions - Latest release: 8 months ago - 433 downloads last month - 48 stars on GitHub - 1 maintainer
rgt 1.0.2
Toolkit to perform regulatory genomics data analysis30 versions - Latest release: over 1 year ago - 1 dependent repositories - 549 downloads last month - 103 stars on GitHub - 3 maintainers
kinase-library 1.1.1
The Kinase Library Project: a Global Atlas of the Human Protein Kinome9 versions - Latest release: about 1 month ago - 487 downloads last month - 9 stars on GitHub - 2 maintainers
oligopool 2024.12.2
Oligopool Calculator - Automated design and analysis of oligopool libraries8 versions - Latest release: 5 months ago - 1 dependent repositories - 66 downloads last month - 1 stars on GitHub - 1 maintainer
rtm-matrixprofile 1.1.102
An open source time series data mining library based on Matrix Profile algorithms.3 versions - Latest release: almost 3 years ago - 93 downloads last month - 0 stars on GitHub - 1 maintainer
motifs 0.1.0
Network motif management library1 version - Latest release: about 4 years ago - 1 dependent repositories - 40 downloads last month - 1 maintainer
scimotf 0.1.3
Performs a FET to find motifs enriched in clusters of genes.3 versions - Latest release: over 2 years ago - 2 dependent packages - 2 dependent repositories - 112 downloads last month - 0 stars on GitHub - 1 maintainer
dipwmsearch 0.1.8
Provides functions to search for any di-nucleotidic Position Weight Matrix (di-PWM) in a genomic ...13 versions - Latest release: about 2 years ago - 1 dependent repositories - 425 downloads last month - 0 stars on gite.lirmm.fr - 2 maintainers
Top 2.9% on pypi.org
13 versions - Latest release: over 4 years ago - 4 dependent packages - 42 dependent repositories - 10.4 thousand downloads last month - 381 stars on GitHub - 3 maintainers
matrixprofile 1.1.10
An open source time series data mining library based on Matrix Profile algorithms.13 versions - Latest release: over 4 years ago - 4 dependent packages - 42 dependent repositories - 10.4 thousand downloads last month - 381 stars on GitHub - 3 maintainers
simple-fast-python 1.0
An implementation of the SiMPle-Fast algorithm1 version - Latest release: about 3 years ago - 2 dependent repositories - 50 downloads last month - 0 stars on GitHub - 1 maintainer
lightmotif 0.9.1
PyO3 bindings and Python interface to lightmotif, a library for platform-accelerated biological m...13 versions - Latest release: 8 months ago - 4.87 thousand downloads last month - 36 stars on GitHub - 1 maintainer
dastk 1.0.1
Differential ATAC-seq toolkit14 versions - Latest release: about 2 years ago - 1 dependent repositories - 292 downloads last month - 28 stars on GitHub - 2 maintainers
motif 0.0.11
motif - Python module written by Wu Fuheng11 versions - Latest release: over 9 years ago - 2 dependent repositories - 244 downloads last month - 1 maintainer
motevowrapper 0.0.6
Simple Python MotEvo wrapper.6 versions - Latest release: about 4 years ago - 1 dependent repositories - 160 downloads last month - 1 stars on GitHub - 1 maintainer
leitmotif 0.2.2
Discovering Leitmotifs in Multidimensional Time Series5 versions - Latest release: 7 months ago - 171 downloads last month - 0 stars on GitHub - 1 maintainer
tspatternfinding 0.0.2
Scripts to find reoccuring patterns in time series.2 versions - Latest release: about 4 years ago - 1 dependent repositories - 82 downloads last month - 1 maintainer
sshmm 1.0.7
A sequence-structure hidden Markov model for the analysis of RNA-binding protein data.11 versions - Latest release: almost 7 years ago - 1 dependent repositories - 228 downloads last month - 1 maintainer
Top 6.3% on pypi.org
9 versions - Latest release: over 5 years ago - 8 dependent repositories - 553 downloads last month - 735 stars on GitHub - 3 maintainers
matrixprofile-ts 0.0.9
An Open Source Python Time Series Library For Motif Discovery using Matrix Profile9 versions - Latest release: over 5 years ago - 8 dependent repositories - 553 downloads last month - 735 stars on GitHub - 3 maintainers
seriesdistancematrix 0.3.1
Flexible time series analysis libraryimplementing Matrix Profile related functionality.1 version - Latest release: over 3 years ago - 1 dependent repositories - 70 downloads last month - 28 stars on GitHub - 2 maintainers
pymemesuite 0.1.0a3
Cython bindings and Python interface to the MEME suite.3 versions - Latest release: 10 months ago - 1 dependent package - 1 dependent repositories - 1.81 thousand downloads last month - 13 stars on GitHub - 1 maintainer
peritus-matrixprofile 1.1.112
Fork of An open source time series data mining library based on Matrix Profile algorithms.3 versions - Latest release: almost 3 years ago - 1 dependent repositories - 56 downloads last month - 0 stars on GitHub - 1 maintainer
motiffinder 0.0.2
A novel approach to motif identification in proteins2 versions - Latest release: over 5 years ago - 1 dependent repositories - 89 downloads last month - 1 stars on GitHub - 1 maintainer
dotmotif 0.15.0
Find graph motifs using simple, intuitive notation13 versions - Latest release: 8 months ago - 1 dependent package - 2 dependent repositories - 246 downloads last month - 84 stars on GitHub - 1 maintainer
peritus-test-matrixprofile 1.1.6
An open source time series data mining library based on Matrix Profile algorithms.6 versions - Latest release: almost 3 years ago - 177 downloads last month - 0 stars on GitHub - 1 maintainer
fstitch-annotate 0.3.3
Provides additional annotation tools using FStitch segment data.4 versions - Latest release: over 5 years ago - 1 dependent repositories - 131 downloads last month - 1 stars on GitHub - 1 maintainer
ts-analysis 0.0.3
Scripts to find reoccuring patterns in time series.2 versions - Latest release: about 4 years ago - 1 dependent repositories - 98 downloads last month - 1 maintainer
fstitch-bidir 0.2.3
Annotates bidirections using FStitch segment data.4 versions - Latest release: almost 6 years ago - 1 dependent repositories - 92 downloads last month - 1 stars on GitHub - 1 maintainer
motifopt 1.2.0
Satellite Motif Optimization1 version - Latest release: almost 2 years ago - 28 downloads last month - 1 maintainer
Related Keywords
genomics
8
bioinformatics
8
discord
6
series
6
time
6
motif-discovery
6
python
6
matrix
5
analysis
5
pattern
5
anomaly
4
science
4
data
4
profile
4
motifs
4
time-series
4
sequence
3
graph
3
network
3
data-science
3
matrix-profile
3
time-series-analysis
3
transcription_factor
3
binding
3
GRO-seq
2
ATAC-seq
2
HMM
2
protein
2
PRO-seq
2
ngs
2
processing
2
signal
2
events
2
biology
2
sequence-motif
2
sequence-analysis
2
python3
2
TF
2
anomaly-detection
2
matrix profile
2
time series
2
regulation
2
search
2
enhancers
2
eRNA
2
machine-learning
2
RNAPII
2
unsupervised
2
polymerase
2
cython-library
1
clustering
1
data-mining
1
hacktoberfest
1
matrixprofile
1
python2
1
query-language
1
segmentation
1
pssm
1
fsdb
1
rust-library
1
networkx
1
neo4j
1
simd
1
chromatin
1
graph-matching
1
graph-database
1
sshmm
1
logo
1
optimization
1
enrichment
1
vf2
1
satellite
1
subgraph-isomorphism
1
transcription-factor
1
binding site
1
transcription
1
transcription factor
1
PWM
1
Position Weight Matrix
1
dinucleotide
1
dinucleotidic
1
IUPAC
1
computational biology
1
algorithms
1
CLIP-Seq
1
RBP
1
RNA
1
series distance matrix
1
RNA-binding
1
radius profile
1
aplbrain
1
structure
1
pip
1
pip3
1
proteomics
1
pypi
1
meme-suite
1
pypi-packages
1
timeseries-analysis
1
timeseries-segmentation
1