Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
pypi.org "cytometry" keyword
numpy-reduced-flowcytometrytools 0.5.0
A python package for performing flow cytometry analysis1 version - Latest release: almost 4 years ago - 1 dependent repositories - 10 downloads last month - 110 stars on GitHub - 1 maintainer
dckit 0.16.1
Graphical toolkit for RT-DC data management60 versions - Latest release: about 2 months ago - 1 dependent repositories - 207 downloads last month - 0 stars on GitHub - 2 maintainers
dcoraid 0.14.1
GUI/CLI for managing data on DCOR98 versions - Latest release: about 1 month ago - 1 dependent repositories - 802 downloads last month - 0 stars on GitHub - 2 maintainers
chipstream 0.2.2
GUI for DC data postprocessing14 versions - Latest release: about 1 month ago - 123 downloads last month - 0 stars on GitHub - 2 maintainers
flowcal 1.3.0
Flow Cytometry Calibration Library11 versions - Latest release: over 3 years ago - 2 dependent repositories - 272 downloads last month - 47 stars on GitHub - 2 maintainers
scyan 1.6.1
Single-cell Cytometry Annotation Network27 versions - Latest release: about 2 months ago - 1 dependent repositories - 375 downloads last month - 28 stars on GitHub - 1 maintainer
dcnum 0.18.0
numerics toolbox for imaging deformability cytometry48 versions - Latest release: 11 days ago - 1 dependent package - 1 dependent repositories - 399 downloads last month - 0 stars on GitHub - 2 maintainers
shapeout2 2.16.2
User interface for deformability cytometry (DC)130 versions - Latest release: 8 days ago - 1 dependent repositories - 1.31 thousand downloads last month - 9 stars on GitHub - 2 maintainers
Top 2.8% on pypi.org
257 versions - Latest release: about 1 month ago - 10 dependent packages - 12 dependent repositories - 14.3 thousand downloads last month - 10 stars on GitHub - 2 maintainers
dclab 0.58.6
Library for real-time deformability cytometry (RT-DC)257 versions - Latest release: about 1 month ago - 10 dependent packages - 12 dependent repositories - 14.3 thousand downloads last month - 10 stars on GitHub - 2 maintainers
sketchkh 0.1.1
Distribution-based sketching of single-cell samples2 versions - Latest release: 3 months ago - 62 downloads last month - 3 stars on GitHub - 1 maintainer
Top 9.0% on pypi.org
16 versions - Latest release: about 2 months ago - 4 dependent packages - 4 dependent repositories - 7.32 thousand downloads last month - 13 stars on GitHub - 1 maintainer
flowutils 1.1.0
Flow Cytometry Standard Utilities16 versions - Latest release: about 2 months ago - 4 dependent packages - 4 dependent repositories - 7.32 thousand downloads last month - 13 stars on GitHub - 1 maintainer
Top 7.2% on pypi.org
22 versions - Latest release: about 2 months ago - 4 dependent packages - 6 dependent repositories - 6.53 thousand downloads last month - 38 stars on GitHub - 1 maintainer
flowio 1.3.0
FlowIO is a Python library for reading / writing Flow Cytometry Standard (FCS) files22 versions - Latest release: about 2 months ago - 4 dependent packages - 6 dependent repositories - 6.53 thousand downloads last month - 38 stars on GitHub - 1 maintainer
flowkit 1.1.1
Flow Cytometry Toolkit27 versions - Latest release: about 1 month ago - 1 dependent package - 1 dependent repositories - 1.58 thousand downloads last month - 147 stars on GitHub - 1 maintainer
Top 2.5% on pypi.org
14 versions - Latest release: 7 months ago - 9 dependent packages - 45 dependent repositories - 14.2 thousand downloads last month - 1,521 stars on GitHub - 1 maintainer
fcsparser 0.2.8
A python package for reading raw fcs files14 versions - Latest release: 7 months ago - 9 dependent packages - 45 dependent repositories - 14.2 thousand downloads last month - 1,521 stars on GitHub - 1 maintainer
cytotransform 0.2.12
Rapid transformations for cytometry data8 versions - Latest release: 10 months ago - 68 downloads last month - 147 stars on GitHub - 1 maintainer
scip-workflows 0.1.2
3 versions - Latest release: about 1 year ago - 26 downloads last month - 1 maintainerxfcs 1.1.6
Extract Flow Cytometry data from FCS files version 3+.2 versions - Latest release: almost 7 years ago - 1 dependent repositories - 14 downloads last month - 0 stars on GitHub - 1 maintainer
xfcsdashboard 0.0.2
Creates interactive plots for FCS file metadata (3.0, 3.1).2 versions - Latest release: almost 7 years ago - 1 dependent repositories - 16 downloads last month - 0 stars on GitHub - 1 maintainer
teimc 1.0.1
Functions for processing imaging mass cytometry data with tellurium isotopes2 versions - Latest release: about 5 years ago - 1 dependent repositories - 16 downloads last month - 0 stars on GitHub - 1 maintainer
shapeout 1.0.10
User interface for real-time deformability cytometry (RT-DC)30 versions - Latest release: about 4 years ago - 1 dependent package - 1 dependent repositories - 244 downloads last month - 5 stars on GitHub - 2 maintainers
pyscuba 0.1.1
Python for Single-cell Clustering Using Bifurcation Analysis2 versions - Latest release: almost 8 years ago - 1 dependent repositories - 10 downloads last month - 0 stars on GitHub - 1 maintainer
pycellid 0.0.18
Functions to analyze single-cell2 versions - Latest release: over 2 years ago - 1 dependent repositories - 23 downloads last month - 1 stars on GitHub - 3 maintainers
flowsom 0.1.1
A Python implementation of FlowSOM algorithm for clustering and visualizing a mass cytometry data...2 versions - Latest release: about 5 years ago - 1 dependent repositories - 74 downloads last month - 25 stars on GitHub - 1 maintainer
eclair 1.18
Robust inference of cell lineages from gene expression data via consensus clustering and the aggr...7 versions - Latest release: about 8 years ago - 1 dependent repositories - 27 downloads last month - 1 stars on GitHub - 1 maintainer
Top 8.8% on pypi.org
20 versions - Latest release: about 3 years ago - 3 dependent repositories - 340 downloads last month - 161 stars on GitHub - 1 maintainer
cytoflow 1.1.1
Python tools for quantitative, reproducible flow cytometry analysis20 versions - Latest release: about 3 years ago - 3 dependent repositories - 340 downloads last month - 161 stars on GitHub - 1 maintainer
chronoclust 0.2.1
A clustering algorithm that will perform clustering on each of a time-series of discrete datasets...3 versions - Latest release: about 4 years ago - 20 downloads last month - 13 stars on GitHub - 1 maintainer
accuri2fcs 0.1.1
Convert Accuri format flow cytometry files to standard .fcs2 versions - Latest release: over 9 years ago - 2 dependent repositories - 34 downloads last month - 1 maintainer
Top 7.7% on pypi.org
10 versions - Latest release: over 3 years ago - 5 dependent repositories - 458 downloads last month - 107 stars on GitHub - 1 maintainer
flowcytometrytools 0.5.1
A python package for performing flow cytometry analysis10 versions - Latest release: over 3 years ago - 5 dependent repositories - 458 downloads last month - 107 stars on GitHub - 1 maintainer
Related Keywords
RT-DC
7
deformability
7
flow
7
python
6
flow-cytometry-analysis
5
flow-cytometry
5
bioinformatics
4
clustering
4
fcs-files
4
fcs
4
flow cytometry
3
data analysis
3
immunology
3
single cell
2
gatingml
2
imaging
2
biology
2
FCS
2
FCS3.0
2
FCS3.1
2
machine-learning
2
pattern-recognition
2
qPCR
2
unsupervised-learning
2
computational-biology
2
analysis
2
DC
2
zellmechanik
2
flow-cytometry-data
2
flowjo
2
data-science
2
gene
1
ensemble-clustering
1
ensemble
1
data-mining
1
consensus-clustering
1
consensus
1
bio-informatics
1
aggregation
1
som
1
self-organizing-map
1
numpy
1
mst
1
pandas
1
minimal-spanning-tree
1
dimentionality reduction
1
visualization
1
machine learning
1
flowsom
1
python3
1
science
1
research
1
facs
1
accuri
1
time-series-clustering
1
cluster-tracking
1
workflow
1
scientific-computing
1
notebooks
1
mixture-modeling
1
jupyter
1
gate
1
fluorescence
1
data-driven
1
scipy
1
tree-matching
1
tree
1
matching
1
graph-matching
1
graph
1
gene-expression
1
matplotlib
1
cell-mechanics
1
cell-analysis
1
imc
1
tellurium
1
mass
1
dashboard
1
single-cell bioinformatics
1
clinical prediction
1
compression
1
SCIP
1
computational biology
1
computational
1
flow-cytometry-files
1
natural-language-understanding
1
natural-language-processing
1
natural-language
1
llm
1
information-extraction
1
data
1
parser
1
cells
1
biological-sciences
1
biological-data-analysis
1
vcellid
1
cellid
1
microscopy
1
pycellid
1
gui
1