Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
pypi.org "immunology" keyword
stitchr 1.1.3
Stitch together coding TCR sequences from V/J/CDR3 information4 versions - Latest release: 4 months ago - 2 dependent packages - 1 dependent repositories - 275 downloads last month - 45 stars on GitHub - 1 maintainer
Top 8.9% on pypi.org
5 versions - Latest release: over 3 years ago - 1 dependent package - 4 dependent repositories - 46 downloads last month - 46 stars on GitHub - 1 maintainer
epitopepredict 0.5.0 💰
Python package for epitope prediction5 versions - Latest release: over 3 years ago - 1 dependent package - 4 dependent repositories - 46 downloads last month - 46 stars on GitHub - 1 maintainer
pygempick 1.2.0
Open Source Batch Gold Particle Picking & Procesing for Immunogold Diagnostics7 versions - Latest release: almost 6 years ago - 1 dependent repositories - 75 downloads last month - 1 stars on GitHub - 1 maintainer
icepop 1.4.3
Python package for analysing immune cell population in expressed genes1 version - Latest release: 9 months ago - 2 dependent repositories - 0 stars on GitHub - 1 maintainer
aims-immune 0.9.2
A software for the analysis of immune repertoires16 versions - Latest release: 2 months ago - 88 downloads last month - 9 stars on GitHub - 1 maintainer
btm 1.1.5
Blood Transcription Modules for transcriptomics analysis5 versions - Latest release: 10 months ago - 86 downloads last month - 8 stars on GitHub - 1 maintainer
immunedb 0.29.11
A system for the analysis and exploration of high-throughput adaptive immune receptor sequencing ...29 versions - Latest release: almost 3 years ago - 1 dependent repositories - 132 downloads last month - 19 stars on GitHub - 1 maintainer
tcrpmhcdataset 0.1.0
Handling Many-to-many TCR::Peptide-MHC Data1 version - Latest release: about 1 month ago - 46 downloads last month - 0 stars on GitHub - 1 maintainer
tidytcells 2.1.1
Standardise TR/MH data33 versions - Latest release: 3 months ago - 2 dependent packages - 1 dependent repositories - 292 downloads last month - 4 stars on GitHub - 1 maintainer
Top 7.2% on pypi.org
22 versions - Latest release: about 2 months ago - 4 dependent packages - 6 dependent repositories - 6.53 thousand downloads last month - 38 stars on GitHub - 1 maintainer
flowio 1.3.0
FlowIO is a Python library for reading / writing Flow Cytometry Standard (FCS) files22 versions - Latest release: about 2 months ago - 4 dependent packages - 6 dependent repositories - 6.53 thousand downloads last month - 38 stars on GitHub - 1 maintainer
flowkit 1.1.1
Flow Cytometry Toolkit27 versions - Latest release: about 1 month ago - 1 dependent package - 1 dependent repositories - 1.58 thousand downloads last month - 147 stars on GitHub - 1 maintainer
cytotransform 0.2.12
Rapid transformations for cytometry data8 versions - Latest release: 10 months ago - 68 downloads last month - 147 stars on GitHub - 1 maintainer
lzgraphs 1.0.2
An Implementation of LZ76 Based Graphs for Repertoire Representation and Analysis11 versions - Latest release: about 2 months ago - 51 downloads last month - 4 stars on GitHub - 1 maintainer
airrship 0.1.5
Simulation of B cell receptor repertoires6 versions - Latest release: about 1 year ago - 65 downloads last month - 6 stars on GitHub - 2 maintainers
vquest 0.0.10
Automate IMGT V-QUEST usage on imgt.org8 versions - Latest release: over 1 year ago - 1 dependent repositories - 78 downloads last month - 13 stars on GitHub - 1 maintainer
Top 3.6% on pypi.org
20 versions - Latest release: 4 months ago - 1 dependent package - 9 dependent repositories - 3.96 thousand downloads last month - 4 maintainers
presto 0.7.2
A bioinformatics toolkit for processing high-throughput lymphocyte receptor sequencing data.20 versions - Latest release: 4 months ago - 1 dependent package - 9 dependent repositories - 3.96 thousand downloads last month - 4 maintainers
deeptcr 2.1.27
Deep Learning Methods for Parsing T-Cell Receptor Sequencing (TCRSeq) Data136 versions - Latest release: about 2 years ago - 1 dependent repositories - 668 downloads last month - 108 stars on GitHub - 1 maintainer
Top 5.5% on pypi.org
25 versions - Latest release: over 1 year ago - 1 dependent package - 7 dependent repositories - 689 downloads last month - 5 maintainers
changeo 1.3.0
A bioinformatics toolkit for processing high-throughput lymphocyte receptor sequencing data.25 versions - Latest release: over 1 year ago - 1 dependent package - 7 dependent repositories - 689 downloads last month - 5 maintainers
hiconet 0.5.4
Hierachical Community Network, data driven omics integration4 versions - Latest release: over 1 year ago - 1 dependent repositories - 38 downloads last month - 3 stars on GitHub - 1 maintainer
Related Keywords
bioinformatics
12
immunoglobulin
4
immunoinformatics
4
python
4
sequencing
3
adaptive immunity
3
adaptive immune receptor repertoires
3
AIRR-seq
3
flow-cytometry-analysis
3
flow-cytometry
3
biology
3
fcs-files
3
fcs
3
tcr
3
cytometry
3
TCR
2
data-science
2
flowjo
2
gatingml
2
systems
2
analysis
2
bioinformatics-tool
2
mhc
2
B cell repertoire analysis
2
Rep-Seq
2
mh
1
standardization
1
t-cell-receptor
1
tr
1
tcr-repertoire
1
repertoire
1
deep-learning
1
adaptive-immunity
1
flow-cytometry-files
1
imgt
1
B cell repertoire
1
repertoire sequencing
1
Graph Theory
1
Immunology
1
Analytics
1
Biology
1
T-cell
1
Repertoire
1
CDR3
1
genetics
1
antibody
1
graph-theory
1
markov-chain
1
pgen
1
gene expression
1
particle-picking
1
immunohistochemical-images
1
immunocytochemistry
1
image-processing
1
image-filters
1
diagnostics
1
IGEM
1
correlation
1
processing
1
micrograph
1
EM
1
picker
1
particle
1
gold
1
batch
1
immunogold
1
epitope-prediction-methods
1
epitope
1
major-histocompatibility-complex
1
data-cleaning
1
IMGT
1
T cell
1
HLA
1
MH
1
MHC
1
TR
1
data handling
1
peptide-MHC
1
machine learning
1
T-cell Receptor
1
database
1
transcriptomics
1
python3
1
kivy
1
biophysics
1
reads
1
microarray
1