Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
pypi.org "gene expression" keyword
tspex 0.6.3
A Python package for calculating tissue-specificity metrics for gene expression.11 versions - Latest release: 11 months ago - 3 dependent repositories - 444 downloads last month - 24 stars on GitHub - 1 maintainer
tf-bind-transformer 0.0.118
Transformer for Transcription Factor Binding95 versions - Latest release: almost 2 years ago - 1 dependent repositories - 568 downloads last month - 76 stars on GitHub - 1 maintainer
scbamtools 0.5
High performance Cython + Python tools to process BAM files with tags as they arise in single-cel...4 versions - Latest release: 2 months ago - 21 downloads last month - 1 stars on GitHub - 1 maintainer
icepop 1.4.3
Python package for analysing immune cell population in expressed genes1 version - Latest release: 9 months ago - 2 dependent repositories - 0 stars on GitHub - 1 maintainer
altanalyze 2.1.3
User Friendly Application for Comprehensive Transcriptome Analysis38 versions - Latest release: about 5 years ago - 285 downloads last month - 91 stars on GitHub - 1 maintainer
mitea-hires 0.0.19
Infer single-cell and spatial microRNA activity from transcriptomics data19 versions - Latest release: 3 months ago - 311 downloads last month - 0 stars on GitHub - 1 maintainer
genbiox 0.3.1
A Comprehensive Bioinformatics Package for Genome Analysis4 versions - Latest release: about 1 year ago - 20 downloads last month - 0 stars on GitHub - 1 maintainer
pysam-win 0.5.12
Pysam for Windows Altanalyze installation4 versions - Latest release: over 6 years ago - 1 dependent repositories - 122 downloads last month - 1 maintainer
pysam-altanalyze 1.0
Modified pysam for use of AltAnalyze on windows1 version - Latest release: over 6 years ago - 1 dependent repositories - 9 downloads last month - 1 maintainer
pygenesig 0.2.2
Create and Validate Gene Signatures3 versions - Latest release: almost 3 years ago - 1 dependent repositories - 30 downloads last month - 2 stars on GitHub - 1 maintainer
normpy 0.1
Normalization methods for RNA-Seq data.1 version - Latest release: 9 months ago - 2 dependent repositories - 1 maintainer
pysam-win-altanalyze 0.5.9
Pysam for Windows Altanalyze installation9 versions - Latest release: over 6 years ago - 1 dependent repositories - 12 downloads last month - 1 maintainer
anansescanpy 1.0.0
implementation of scANANSE for scanpy objects in Python17 versions - Latest release: over 1 year ago - 119 downloads last month - 7 stars on GitHub - 1 maintainer
iterativewgcna 1.1.6
Iterative application of WGCNA4 versions - Latest release: about 6 years ago - 1 dependent repositories - 69 downloads last month - 59 stars on GitHub - 1 maintainer
Related Keywords
bioinformatics
11
transcriptome analysis
4
single-cell
2
spatial
1
mitea
1
mir
1
microrna
1
splicing-visualization
1
splicing-quantification
1
single-cell-splicing
1
scrna-seq-data
1
rna-seq-data
1
python
1
pathway-analysis
1
pagerank
1
network-analysis
1
marker-gene-analysis
1
louvain-community-detection
1
WGCNA
1
network
1
arts-of-coding
1
open chromatin
1
GRN
1
RNA-Seq
1
sequence analysis
1
signatures
1
comparative genomics
1
variant analysis
1
annotation
1
sequencing
1
preprocessing
1
quality control
1
genome analysis
1
genomics
1
rna sequencing
1
SAM
1
BAM
1
single cell
1
transcription-factors
1
transcription-factor-binding
1
gene-expression
1
deep-learning
1
attention-mechanism
1
artificial-intelligence
1
transcription factors
1
transformers
1
attention mechanism
1
deep learning
1
artificial intelligence
1
transcriptomics
1
tissue-specificity
1
graphical-interface
1
fastq-anaysis
1
command-line-tool
1
clustering
1
cell-type-classification
1
cell-cycle
1
bioinformatics-pipeline
1
bam-files
1
alternative-splicing
1
reads
1
microarray
1
immunology
1
biology
1
cell barcode
1
genetics
1
CRAM
1