pypi.org "multi-omics" keyword
View the packages on the pypi.org package registry that are tagged with the "multi-omics" keyword.
Top 4.7% on pypi.org
14 versions - Latest release: 3 months ago - 24 dependent packages - 12 dependent repositories - 87.6 thousand downloads last month - 99 stars on GitHub - 1 maintainer
mudata 0.3.2
Multimodal data14 versions - Latest release: 3 months ago - 24 dependent packages - 12 dependent repositories - 87.6 thousand downloads last month - 99 stars on GitHub - 1 maintainer
Top 4.7% on pypi.org
10 versions - Latest release: 10 months ago - 15 dependent packages - 6 dependent repositories - 9.71 thousand downloads last month - 245 stars on GitHub - 1 maintainer
muon 0.1.7
Multimodal omics analysis framework10 versions - Latest release: 10 months ago - 15 dependent packages - 6 dependent repositories - 9.71 thousand downloads last month - 245 stars on GitHub - 1 maintainer
muvi 0.1.5
MuVI: A multi-view latent variable model with domain-informed structured sparsity for integrating...5 versions - Latest release: 10 months ago - 48 downloads last month - 31 stars on GitHub - 1 maintainer
momics 0.4.0
A package to create and manage genome-related TileDB arrays4 versions - Latest release: 11 months ago - 18 downloads last month - 0 stars on GitHub - 1 maintainer
mofaflex 0.1.0rc2
Factor Analysis Models2 versions - Latest release: about 2 months ago - 31 downloads last month - 16 stars on GitHub - 1 maintainer
modos 0.3.3
SMOC Multi-Omics Digital Object System API9 versions - Latest release: 12 days ago - 141 downloads last month - 2 stars on GitHub - 2 maintainers
mowgli 0.4.0
Mowgli is a novel method for the integration of paired multi-omics data with any type and number ...5 versions - Latest release: about 1 year ago - 2 dependent repositories - 76 downloads last month - 4 stars on GitHub - 1 maintainer
openomics 0.9.2
OpenOmics provides a bioinformatics API and web-app platform integrate and visualize the multiomi...12 versions - Latest release: almost 2 years ago - 1 dependent repositories - 77 downloads last month - 33 stars on GitHub - 1 maintainer
mogonet 2.0.1
Package for MOGONET method @nature communications12 versions - Latest release: 2 months ago - 61 downloads last month - 2 stars on GitHub - 1 maintainer
maui-tools 0.1.95
Multi-omics Autoencoder Integration17 versions - Latest release: over 4 years ago - 1 dependent repositories - 58 downloads last month - 49 stars on GitHub - 1 maintainer
pymultiomics 1.0.4
A Python package for multi-omics data integration and analysis5 versions - Latest release: over 3 years ago - 1 dependent repositories - 41 downloads last month - 24 stars on GitHub - 1 maintainer
move-dl 1.5.0
Multi-omics variational autoencoder22 versions - Latest release: about 1 year ago - 1 dependent repositories - 39 downloads last month - 81 stars on GitHub - 2 maintainers
ymp 0.3.1
Flexible multi-omic pipeline system8 versions - Latest release: about 1 year ago - 1 dependent repositories - 87 downloads last month - 18 stars on GitHub - 1 maintainer
scotch-sc 1.0.0
SCOTCH: Single-Cell multi-modal integration using Optimal Transport and Cell matCHing1 version - Latest release: over 1 year ago - 6 downloads last month - 6 stars on GitHub - 1 maintainer
magine 0.1.5
Package to analyze biological data.20 versions - Latest release: over 4 years ago - 2 dependent repositories - 60 downloads last month - 9 stars on GitHub - 1 maintainer
mudatasets 0.0.2
Multimodal Datasets in MuData format2 versions - Latest release: over 2 years ago - 1 dependent repositories - 58 downloads last month - 3 stars on GitHub - 1 maintainer
modas 2.2.1
MODAS: Multi-omics data association study21 versions - Latest release: about 1 year ago - 101 downloads last month - 16 stars on GitHub - 1 maintainer
graphvelo 0.1.11
Inferring manifold-constrained velocity and transforming vectors across representations12 versions - Latest release: 5 months ago - 96 downloads last month - 6 stars on GitHub - 1 maintainer
jcast 0.3.5
JCAST uses splice junction information from RNA-seq data to create custom protein databases15 versions - Latest release: almost 3 years ago - 1 dependent repositories - 38 downloads last month - 19 stars on GitHub - 1 maintainer
monti 1.2.2
A multi-omics integrative analysis tool2 versions - Latest release: about 4 years ago - 1 dependent repositories - 15 downloads last month - 5 stars on GitHub - 1 maintainer
Top 8.0% on pypi.org
23 versions - Latest release: 11 months ago - 2 dependent packages - 6 dependent repositories - 2.5 thousand downloads last month - 341 stars on GitHub - 2 maintainers
mofapy2 0.7.2
Multi-omics factor analysis23 versions - Latest release: 11 months ago - 2 dependent packages - 6 dependent repositories - 2.5 thousand downloads last month - 341 stars on GitHub - 2 maintainers
neticspy 0.1.5
Python implementation of NetICS. (Network-based Integration of Multi-omics data).11 versions - Latest release: about 4 years ago - 1 dependent repositories - 19 downloads last month - 1 stars on GitHub - 2 maintainers
gnnsubnet 0.2.1
Disease Subnetwork Detection with Explainable Graph Neural Networks15 versions - Latest release: over 2 years ago - 1 dependent repositories - 679 downloads last month - 20 stars on GitHub - 1 maintainer
Related Keywords
bioinformatics
6
genomics
4
single-cell
4
python
3
muon
3
anndata
3
mudata
3
multimodal-omics-analysis
3
mofa
2
factor-analysis
2
machine-learning
2
deep-learning
2
scverse
2
metabolomics
2
proteomics
2
rnaseq
2
scrna-seq
2
integration
2
scanpy
2
data-integration
2
ymp
1
generegulation
1
rna-seq
1
omics-pipeline
1
hacktoberfest2022
1
hacktoberfest-accepted
1
hacktoberfest
1
extensible
1
conda-environment
1
snakemake
1
bioconda
1
conda
1
matrix-factorization
1
metagenomics
1
automation
1
workflow
1
pipeline
1
variational-inference
1
explainable-ai
1
disease-networks
1
graph-neural-networks
1
multi-omic-integration
1
bioinformatics-tool
1
bioinformatics-analysis
1
integrative-analysis
1
mass-spectrometry
1
isoform
1
scientific
1
single-cell-dynamics
1
host-virus
1
dynamic-system-modeling
1
contrastive PCA
1
Mendelian randomization
1
GWAS
1
multiome
1
multimodal-omics
1
visualization
1
network analysis
1
enrichment analysis
1
biological pathways
1
biological networks
1
spatialomics
1
multimodal
1
dictionary-learning
1
rest-api
1
omics
1
metadata
1
fair
1
cli
1
muvi
1
sparse
1
matrix
1
format
1
epigenomics
1
Tile-DB
1
variational inference
1
structured sparsity
1
latent variable model
1
feature sets
1
multi-view
1
scatac-seq
1
multimodal-data
1
cite-seq
1
data-analysis
1
variational-autoencoder
1
variational
1
multi-modal
1
bayesian-inference
1
associations-inference
1
transcriptomics
1
latent-factor-model
1
cancer-genomics
1
autoencoder
1
shell-script
1
shell
1
r
1
nextflow-pipeline
1
nextflow
1
multiomics-data
1
multiomics
1