pypi.org "bioconda" keyword
View the packages on the pypi.org package registry that are tagged with the "bioconda" keyword.
ymp 0.3.1
Flexible multi-omic pipeline system8 versions - Latest release: 9 months ago - 1 dependent repositories - 337 downloads last month - 18 stars on GitHub - 1 maintainer
Top 2.0% on pypi.org
48 versions - Latest release: 2 months ago - 7 dependent packages - 74 dependent repositories - 20.2 thousand downloads last month - 1,162 stars on GitHub - 1 maintainer
multiqc 1.27.1
Create aggregate bioinformatics analysis reports across many samples and tools48 versions - Latest release: 2 months ago - 7 dependent packages - 74 dependent repositories - 20.2 thousand downloads last month - 1,162 stars on GitHub - 1 maintainer
dbcan 5.0.4
updated standalone version of dbCAN annotation tool for automated CAZyme annotation11 versions - Latest release: 2 days ago - 1 dependent repositories - 647 downloads last month - 143 stars on GitHub - 2 maintainers
deepaccess 0.1.3
A package for training and interpreting an ensemble of neural networks for chromatin accessibility4 versions - Latest release: almost 4 years ago - 1 dependent repositories - 175 downloads last month - 6 stars on GitHub - 1 maintainer
multiqc-msk 1.11.dev0
Create aggregate bioinformatics analysis reports across many samples and tools1 version - Latest release: almost 4 years ago - 1 dependent repositories - 70 downloads last month - 1,286 stars on GitHub - 1 maintainer
Top 6.7% on pypi.org
19 versions - Latest release: 5 days ago - 1 dependent package - 3 dependent repositories - 1.97 thousand downloads last month - 584 stars on GitHub - 3 maintainers
sniffles 2.6.2
A fast structural variation caller for long-read sequencing data19 versions - Latest release: 5 days ago - 1 dependent package - 3 dependent repositories - 1.97 thousand downloads last month - 584 stars on GitHub - 3 maintainers
Top 4.4% on pypi.org
36 versions - Latest release: almost 2 years ago - 6 dependent packages - 5 dependent repositories - 11.9 thousand downloads last month - 386 stars on GitHub - 2 maintainers
genomepy 0.16.1
Genes and genomes at your fingertips36 versions - Latest release: almost 2 years ago - 6 dependent packages - 5 dependent repositories - 11.9 thousand downloads last month - 386 stars on GitHub - 2 maintainers
Top 7.4% on pypi.org
72 versions - Latest release: 6 months ago - 13 dependent packages - 3 dependent repositories - 22.8 thousand downloads last month - 153 stars on GitHub - 1 maintainer
pyrodigal 3.6.3
Cython bindings and Python interface to Prodigal, an ORF finder for genomes and metagenomes.72 versions - Latest release: 6 months ago - 13 dependent packages - 3 dependent repositories - 22.8 thousand downloads last month - 153 stars on GitHub - 1 maintainer
Top 6.6% on pypi.org
65 versions - Latest release: 4 months ago - 2 dependent packages - 4 dependent repositories - 2.34 thousand downloads last month - 50 stars on GitHub - 3 maintainers
chanjo 4.7.2
Coverage analysis tool for clinical sequencing65 versions - Latest release: 4 months ago - 2 dependent packages - 4 dependent repositories - 2.34 thousand downloads last month - 50 stars on GitHub - 3 maintainers
pyrpipe 0.0.5
pyrpipe6 versions - Latest release: about 4 years ago - 1 dependent repositories - 172 downloads last month - 82 stars on GitHub - 1 maintainer
parsomics-plugin-dbcan 1.0.3
A parsomics plugin to populate protein annotations with dbCAN4 versions - Latest release: 3 months ago - 119 downloads last month - 150 stars on GitHub - 1 maintainer
run-dbcan 3.0.0
Standalone version of dbCAN annotation tool for automated CAZyme annotation14 versions - Latest release: over 3 years ago - 1 dependent repositories - 231 downloads last month - 150 stars on GitHub - 2 maintainers
protgraph 0.3.11
ProtGraph, a graph generator for proteins.20 versions - Latest release: 7 months ago - 1 dependent repositories - 434 downloads last month - 12 stars on GitHub - 1 maintainer
multiqc-jupyterlab-helper 1.12.1.dev0
Create aggregate bioinformatics analysis reports across many samples and tools2 versions - Latest release: about 3 years ago - 1 dependent repositories - 50 downloads last month - 1,267 stars on GitHub - 1 maintainer
Related Keywords
bioinformatics
10
python
7
pypi
4
sequencing
4
multiqc
3
data-visualization
3
analysis
3
quality control
3
next generation sequencing
3
NGS
3
biology
3
quality-control
3
reporting
3
seqera
3
vizualisation
3
anaconda
3
database
3
dbcan
3
docker
3
webserver
3
genomics
3
rna-seq
2
conda
2
gene
2
genome
2
simd
1
coverage
1
clinical
1
python-library
1
python-interface
1
orf-finder
1
metagenomes
1
gene-finding
1
cython-wrapper
1
prodigal
1
orf
1
ucsc
1
ncbi
1
pipeline
1
exome
1
completeness
1
uniprot
1
diagnostics
1
sambamba
1
sql
1
bioinformatics-analysis
1
bioinformatics-pipeline
1
ncbi-sra
1
rna-seq-pipeline
1
rna-seq-workflows
1
fasta
1
graph
1
peptide
1
protein
1
python3
1
workflow
1
automation
1
rnaseq
1
metagenomics
1
snakemake
1
conda-environment
1
extensible
1
hacktoberfest
1
hacktoberfest-accepted
1
hacktoberfest2022
1
multi-omics
1
omics-pipeline
1
ymp
1
deep-learning
1
epigenomics
1
interpretation
1
pypi-package
1
nanopore
1
ngm-lr
1
pacbio
1
structural-variation
1
structural-variations
1
Ensembl
1
GENCODE
1
NCBI
1
UCSC
1
annotation
1
assembly
1
ensembl
1