Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
pypi.org "Bioinformatics" keyword
jla-tailer 0.1.18
Tool to find 3' tailing of non-coding RNAs25 versions - Latest release: about 2 years ago - 1 dependent repositories - 191 downloads last month - 1 stars on GitHub - 1 maintainer
dedup_hash 0.1.1
Finds and discards exact duplicate reads in fastq files.2 versions - Latest release: over 7 years ago - 16 downloads last month - 0 stars on GitHub - 1 maintainer
congas 0.0.78
Copy Number genotyping from single cell RNA sequencing63 versions - Latest release: 8 months ago - 441 downloads last month - 10 stars on GitHub - 1 maintainer
clep 0.0.3
A Hybrid Data and Knowledge Driven Framework for Generating Patient Representations3 versions - Latest release: 3 months ago - 1 dependent repositories - 31 downloads last month - 17 stars on GitHub - 2 maintainers
biopyutils 0.2.0
A bionformatic tookits13 versions - Latest release: over 3 years ago - 141 downloads last month - 1 stars on GitHub - 1 maintainer
bioplots 0.1.6
A data visualization package for bioinformatians and computational biologist17 versions - Latest release: about 4 years ago - 130 downloads last month - 6 stars on GitHub - 1 maintainer
biobb-structure-manager 3.0.2
BioBB_structure_manager is a library to efficiently load and process biomolecular 3D structures.10 versions - Latest release: about 4 years ago - 1 dependent package - 1 dependent repositories - 112 downloads last month - 1 stars on GitHub - 2 maintainers
biobb-remote 1.2.2
Biobb_remote is the Biobb module for remote execution via ssl.3 versions - Latest release: over 2 years ago - 1 dependent repositories - 45 downloads last month - 1 stars on GitHub - 2 maintainers
bedqr 0.4.6
2 versions - Latest release: almost 2 years ago - 340 downloads last month - 1 maintainerammolite 0.8.0
Visualize structure data from Biotite with PyMOL9 versions - Latest release: almost 2 years ago - 2 dependent repositories - 89 downloads last month - 16 stars on GitHub - 2 maintainers
ctrlf-tf 1.0b4
Protein-DNA binding site caller from kmer data5 versions - Latest release: 12 months ago - 76 downloads last month - 2 stars on GitHub - 1 maintainer
syba 0.0.5
SyBA: a tool and database for standardizing gene names from the main bacterial pathogens causing ...2 versions - Latest release: 2 months ago - 38 downloads last month - 1 stars on GitHub - 1 maintainer
gsea-incontext-notk 0.1.3
GSEA-InContext Gene Set Enrichment Analysis in Python4 versions - Latest release: over 4 years ago - 1 dependent repositories - 40 downloads last month - 0 stars on GitHub - 1 maintainer
gene-connector-cli 0.6.5
The Gene-Connector command line interface8 versions - Latest release: 6 months ago - 50 downloads last month - 1 stars on GitHub - 1 maintainer
mutation-simulator 3.0.2
A tool for simulating random mutations in any genome3 versions - Latest release: 4 months ago - 1 dependent repositories - 52 downloads last month - 30 stars on GitHub - 1 maintainer
vonda 0.6
VoNDA (Visualization of Network DAta) allows for interactive visualization of heterogeneous data1 version - Latest release: almost 10 years ago - 1 dependent repositories - 6 downloads last month - 1 maintainer
detectcfp 1.0.6 removed
Detect carbon fixation pathways7 versions - Latest release: over 3 years ago
Related Keywords
Workflows
33
BioExcel
33
Compatibility
33
bioinformatics
17
Computational Biology
7
Metagenomics
6
Computational biology
5
Biology
5
Genomics
5
python
4
Cancer
4
GO
4
Gene Ontology
4
Enrichment
4
Protein
4
metagenomics
4
Phylogeny
3
Computational Biologist
3
Python
3
genomics
3
Sequencing
3
FASTA
3
lateral-gene-transfer
2
lgt
2
horizontal-gene-transfer
2
Flexibility
2
hgt
2
pipeline
2
Genetics
2
Ensembles
2
enrichment-analysis
2
Structure
2
HGT_detection
2
Ontology
2
Drug Discovery
2
drug-discovery
2
rna-seq
2
ncRNAs
2
GEO
2
Gene Expression Omnibus
2
systems-biology
2
Simulation
2
Modeling
2
Computational Systems Biology
2
simulator
2
Refinement
2
Binning
2
pandas
2
proteomics
2
Genome
2
Synonymous
2
Genes
2
Machine Learning
2
Transcriptomics
2
Computational
2
Data visualization
2
biology
2
Metastasis
2
Copy-number
2
CNA
2
CNV
2
RNA
2
scDNA
2
scRNA
2
visualization
2
NCBI
2
Genetic-references
2
XML
2
Data-analysis
2
FASTA format
1
Reading files
1
Writing files
1
SV
1
SNPs
1
Dataclass
1
Scientific computing
1
gsea
1
fasta
1
mass-spectrometry
1
projection
1
reduction
1
package
1
protein
1
protein-sequences
1
dimensionality
1
software
1
3D Genome Conformation
1
networks-biology
1
Visualization
1
Multi-contact
1
genome-structure
1
multi-contact
1
causal-networks
1
CarbonFixationPathway
1
python3
1
rust
1
GEOparse
1
svs
1
sv
1
Microarray
1