Ecosyste.ms: Packages

An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.

pypi.org "global-health" keyword

seroba 1.0.0
SEROBA: Serotyping for illumina reads
3 versions - Latest release: over 6 years ago - 1 dependent repositories - 11 downloads last month - 15 stars on GitHub - 1 maintainer
Top 6.8% on pypi.org
pyfastaq 3.17.0
Script to manipulate FASTA and FASTQ files, plus API for developers
21 versions - Latest release: about 6 years ago - 42 dependent repositories - 646 downloads last month - 68 stars on GitHub - 1 maintainer
plasmidpredictor 0.1.0
plasmidpredictor: predict which plasmid should be present from uncorrected long read data
1 version - Latest release: over 5 years ago - 1 dependent repositories - 48 downloads last month - 37 stars on GitHub - 1 maintainer
Top 9.9% on pypi.org
iva 1.0.9
Iterative Virus Assembler
16 versions - Latest release: over 6 years ago - 5 dependent repositories - 87 downloads last month - 52 stars on GitHub - 1 maintainer
Top 9.7% on pypi.org
ersilia 0.1.33 💰
A hub of AI/ML models for open source drug discovery and global health
30 versions - Latest release: 11 days ago - 1 dependent repositories - 258 downloads last month - 186 stars on GitHub - 1 maintainer
Top 8.1% on pypi.org
circlator 1.5.5
circlator: a tool to circularise genome assemblies
33 versions - Latest release: over 6 years ago - 6 dependent repositories - 145 downloads last month - 212 stars on GitHub - 1 maintainer
Top 7.1% on pypi.org
ariba 2.14.6
ARIBA: Antibiotic Resistance Identification By Assembly
53 versions - Latest release: over 3 years ago - 7 dependent repositories - 285 downloads last month - 151 stars on GitHub - 1 maintainer
tiptoft 1.0.2
tiptoft: predict which plasmid should be present from uncorrected long read data
6 versions - Latest release: over 4 years ago - 1 dependent repositories - 52 downloads last month - 37 stars on GitHub - 1 maintainer
albatradis 1.0.1
Comparitive transposon mutagenesis experiment analysis
2 versions - Latest release: over 4 years ago - 1 dependent repositories - 23 downloads last month - 7 stars on GitHub - 1 maintainer
Related Keywords
infectious-diseases 9 bioinformatics 8 genomics 8 pathogen 8 research 8 bioinformatics-pipeline 7 next-generation-sequencing 6 sequencing 6 uncorrected 2 plasmidfinder 2 plasmid 2 pacbio 2 oxford-nanopore 2 nanopore 2 long-reads 2 kmer 2 drug-discovery 1 machine-learning 1 ersilia 1 open-science 1 model-hub 1 neglected-tropical-disease 1 open-source 1 python 1 microbial-genomics 1 tradis 1 transposon-mutagenesis 1