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pypi.org "infectious-diseases" keyword

View the packages on the pypi.org package registry that are tagged with the "infectious-diseases" keyword.

tiptoft 1.0.2
tiptoft: predict which plasmid should be present from uncorrected long read data
6 versions - Latest release: over 5 years ago - 1 dependent repositories - 17 downloads last month - 40 stars on GitHub - 1 maintainer
Top 7.1% on pypi.org
ariba 2.14.6
ARIBA: Antibiotic Resistance Identification By Assembly
53 versions - Latest release: almost 5 years ago - 7 dependent repositories - 338 downloads last month - 177 stars on GitHub - 2 maintainers
Top 9.7% on pypi.org
ersilia 0.1.48 💰
A hub of AI/ML models for open source drug discovery and global health
45 versions - Latest release: 2 days ago - 1 dependent repositories - 251 downloads last month - 186 stars on GitHub - 1 maintainer
Top 8.1% on pypi.org
circlator 1.5.5
circlator: a tool to circularise genome assemblies
33 versions - Latest release: over 7 years ago - 6 dependent repositories - 122 downloads last month - 244 stars on GitHub - 2 maintainers
Top 9.9% on pypi.org
iva 1.0.9
Iterative Virus Assembler
16 versions - Latest release: over 7 years ago - 5 dependent repositories - 51 downloads last month - 56 stars on GitHub - 2 maintainers
epispot 2.1.1
A tool for modeling infectious diseases.
12 versions - Latest release: over 4 years ago - 1 dependent repositories - 38 downloads last month - 17 stars on GitHub - 2 maintainers
albatradis 1.0.1
Comparitive transposon mutagenesis experiment analysis
2 versions - Latest release: almost 6 years ago - 1 dependent repositories - 48 downloads last month - 9 stars on GitHub - 1 maintainer
seroba 1.0.0
SEROBA: Serotyping for illumina reads
3 versions - Latest release: almost 8 years ago - 1 dependent repositories - 9 downloads last month - 16 stars on GitHub - 1 maintainer
epispot-nightly 3.0.0a3
The nightly version of the epispot package.
41 versions - Latest release: almost 4 years ago - 1 dependent repositories - 187 downloads last month - 17 stars on GitHub - 2 maintainers
plasmidpredictor 0.1.0
plasmidpredictor: predict which plasmid should be present from uncorrected long read data
1 version - Latest release: about 7 years ago - 1 dependent repositories - 13 downloads last month - 40 stars on GitHub - 1 maintainer
ziggie 0.1.1
Infectious disease modelling package
5 versions - Latest release: about 5 years ago - 1 dependent repositories - 32 downloads last month - 1 stars on GitHub - 1 maintainer
fluspred 1.1
A bioinformatic-ware to predict the zoonotic host tropism of Influenza A virus.
2 versions - Latest release: about 2 years ago - 10 downloads last month - 3 stars on GitHub - 2 maintainers
Top 6.8% on pypi.org
pyfastaq 3.18.0
Script to manipulate FASTA and FASTQ files, plus API for developers.
22 versions - Latest release: 5 months ago - 42 dependent repositories - 1.37 thousand downloads last month - 71 stars on GitHub - 2 maintainers
Related Keywords
global-health 9 bioinformatics 8 genomics 8 research 8 pathogen 8 bioinformatics-pipeline 7 sequencing 6 next-generation-sequencing 6 modeling 3 infectious-disease-models 3 pacbio 2 oxford-nanopore 2 plasmid 2 plasmidfinder 2 nanopore 2 uncorrected 2 long-reads 2 kmer 2 epidemiology 2 covid-19 2 coronavirus 2 compartmental-models 2 microbial-genomics 1 tradis 1 transposon-mutagenesis 1 genome 1 influenza 1 prediction-model 1 protein 1 strains 1 virus 1 python 1 open-source 1 neglected-tropical-disease 1 model-hub 1 open-science 1 ersilia 1 machine-learning 1 drug-discovery 1