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pypi.org "infectious-diseases" keyword

View the packages on the pypi.org package registry that are tagged with the "infectious-diseases" keyword.

Top 9.9% on pypi.org
iva 1.0.9
Iterative Virus Assembler
16 versions - Latest release: about 7 years ago - 5 dependent repositories - 424 downloads last month - 55 stars on GitHub - 2 maintainers
seroba 1.0.0
SEROBA: Serotyping for illumina reads
3 versions - Latest release: over 7 years ago - 1 dependent repositories - 68 downloads last month - 16 stars on GitHub - 1 maintainer
epispot-nightly 3.0.0a3
The nightly version of the epispot package.
41 versions - Latest release: over 3 years ago - 1 dependent repositories - 1.22 thousand downloads last month - 17 stars on GitHub - 2 maintainers
epispot 2.1.1
A tool for modeling infectious diseases.
12 versions - Latest release: about 4 years ago - 1 dependent repositories - 303 downloads last month - 17 stars on GitHub - 2 maintainers
Top 7.1% on pypi.org
ariba 2.14.6
ARIBA: Antibiotic Resistance Identification By Assembly
53 versions - Latest release: over 4 years ago - 7 dependent repositories - 1.29 thousand downloads last month - 173 stars on GitHub - 2 maintainers
tiptoft 1.0.2
tiptoft: predict which plasmid should be present from uncorrected long read data
6 versions - Latest release: over 5 years ago - 1 dependent repositories - 243 downloads last month - 39 stars on GitHub - 1 maintainer
Top 9.7% on pypi.org
ersilia 0.1.43 💰
A hub of AI/ML models for open source drug discovery and global health
40 versions - Latest release: 19 days ago - 1 dependent repositories - 1.64 thousand downloads last month - 186 stars on GitHub - 1 maintainer
plasmidpredictor 0.1.0
plasmidpredictor: predict which plasmid should be present from uncorrected long read data
1 version - Latest release: over 6 years ago - 1 dependent repositories - 59 downloads last month - 39 stars on GitHub - 1 maintainer
albatradis 1.0.1
Comparitive transposon mutagenesis experiment analysis
2 versions - Latest release: over 5 years ago - 1 dependent repositories - 106 downloads last month - 9 stars on GitHub - 1 maintainer
fluspred 1.1
A bioinformatic-ware to predict the zoonotic host tropism of Influenza A virus.
2 versions - Latest release: over 1 year ago - 57 downloads last month - 3 stars on GitHub - 2 maintainers
Top 6.8% on pypi.org
pyfastaq 3.18.0
Script to manipulate FASTA and FASTQ files, plus API for developers.
22 versions - Latest release: 26 days ago - 42 dependent repositories - 1.6 thousand downloads last month - 70 stars on GitHub - 2 maintainers
ziggie 0.1.1
Infectious disease modelling package
5 versions - Latest release: almost 5 years ago - 1 dependent repositories - 187 downloads last month - 1 stars on GitHub - 1 maintainer
Top 8.1% on pypi.org
circlator 1.5.5
circlator: a tool to circularise genome assemblies
33 versions - Latest release: about 7 years ago - 6 dependent repositories - 363 downloads last month - 236 stars on GitHub - 2 maintainers
Related Keywords
global-health 9 bioinformatics 8 genomics 8 pathogen 8 research 8 bioinformatics-pipeline 7 next-generation-sequencing 6 sequencing 6 infectious-disease-models 3 modeling 3 uncorrected 2 plasmidfinder 2 plasmid 2 pacbio 2 oxford-nanopore 2 nanopore 2 long-reads 2 kmer 2 epidemiology 2 covid-19 2 coronavirus 2 compartmental-models 2 virus 1 strains 1 protein 1 prediction-model 1 influenza 1 genome 1 transposon-mutagenesis 1 tradis 1 microbial-genomics 1 python 1 open-source 1 neglected-tropical-disease 1 model-hub 1 open-science 1 ersilia 1 machine-learning 1 drug-discovery 1