Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
pypi.org "plasmids" keyword
mob-suite 3.1.8
MOB-suite is a set of tools for finding, typing and reconstruction of plasmids from draft and com...25 versions - Latest release: 6 months ago - 1 dependent repositories - 88 downloads last month - 105 stars on GitHub - 1 maintainer
moclo-cidar 0.4.0
CIDAR implementation for the base moclo library.5 versions - Latest release: almost 6 years ago - 1 dependent repositories - 28 downloads last month - 12 stars on GitHub - 1 maintainer
plassembler 1.6.2
Quickly and accurately assemble plasmids in hybrid sequenced bacterial isolates10 versions - Latest release: 3 months ago - 54 downloads last month - 45 stars on GitHub - 1 maintainer
plasflow 1.1.0
PlasFlow - predicting plasmid sequences in metagenomic data4 versions - Latest release: about 6 years ago - 1 dependent repositories - 49 downloads last month - 89 stars on GitHub - 1 maintainer
plasmidcanvas 1.0.0
A graphics package for creating customised plasmid maps2 versions - Latest release: 2 months ago - 11 downloads last month - 1 stars on GitHub - 2 maintainers
moclo-ecoflex 0.3.1
EcoFlex implementation for the base moclo library.5 versions - Latest release: over 5 years ago - 1 dependent repositories - 15 downloads last month - 12 stars on GitHub - 1 maintainer
moclo 0.4.7
A Python implementation of the MoClo system logic.14 versions - Latest release: over 2 years ago - 2 dependent repositories - 80 downloads last month - 12 stars on GitHub - 1 maintainer
moclo-ytk 0.4.0
Yeast ToolKit implementation for the base moclo library.6 versions - Latest release: almost 6 years ago - 2 dependent repositories - 32 downloads last month - 12 stars on GitHub - 1 maintainer
cb-platon 1.4.0
Platon: identification and characterization of bacterial plasmid contigs from short-read draft as...10 versions - Latest release: almost 4 years ago - 1 dependent repositories - 50 downloads last month - 98 stars on GitHub - 1 maintainer
plascad 1.17
Plasmid classfication, ARGs annotation, Visualization1 version - Latest release: over 3 years ago - 1 dependent repositories - 15 downloads last month - 37 stars on GitHub - 1 maintainer
python-queen 1.1.0
QUEEN (a Python module to universally program, QUinE, and Edit Nucleotide sequences)3 versions - Latest release: almost 2 years ago - 1 dependent repositories - 28 downloads last month - 35 stars on GitHub - 1 maintainer
synbio 0.6.17
Synbio design and build library53 versions - Latest release: over 4 years ago - 1 dependent repositories - 574 downloads last month - 15 stars on GitHub - 2 maintainers
plasmiduncover 1.0.4
Script to obtain plasmid id from WGS data using bowtie2 to map3 versions - Latest release: over 6 years ago - 1 dependent repositories - 13 downloads last month - 1 stars on GitHub - 1 maintainer
bakta 1.9.3
Bakta: rapid & standardized annotation of bacterial genomes, MAGs & plasmids39 versions - Latest release: 3 months ago - 1 dependent repositories - 511 downloads last month - 383 stars on GitHub - 1 maintainer
tadrep 0.9.2
TaDRep: Targeted Detection and Reconstruction of Plasmids4 versions - Latest release: 28 days ago - 1 dependent repositories - 105 downloads last month - 19 stars on GitHub - 1 maintainer
Related Keywords
bioinformatics
9
biopython
5
bacteria
4
synthetic biology
4
modular cloning
4
moclo
4
modular-cloning
4
system-biology
4
wgs
2
microbiology
2
annotation
2
contigs
2
plasmid
2
Plasmids
2
assembly
1
ngs
1
antibiotic resistance
1
microbial-genomics
1
mobilization
1
antibiotic-resistance
1
jupyter-notebooks
1
synbio
1
lab automation
1
dna assembly
1
metagenome-assembled-genomes
1
dna-assembly
1
picklist
1
mag
1
protocols
1
robotics
1
seqrecord
1
bowtie2
1
patlas
1
genome-annotation
1
bacterial-genomes
1
samtools
1
finding
1
typing
1
reconstruction
1
assemblies
1
clustering
1
microbial
1
metagenome
1
genome
1
signature
1
ML
1
classification
1
fasta
1
metagenome-assembly
1
metagenomes
1
plasflow
1
plasmid-sequences
1
prediction
1
tensorflow
1
plasmidmap
1
biology
1
map
1
microbiology-publication
1
yeast
1