Data

Tools

Indexes

Applications

Experiments

Packages

An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.

bioconductor.org "PooledScreens" keyword

View the packages on the bioconductor.org package registry that are tagged with the "PooledScreens" keyword.

mnem 1.24.0
Mixture Nested Effects Models
5 versions - Latest release: 3 months ago - 4 dependent packages - 13.1 thousand downloads total - 4 stars on GitHub - 1 maintainer
nempi 1.16.0
Inferring unobserved perturbations from gene expression data
5 versions - Latest release: 3 months ago - 6.41 thousand downloads total - 2 stars on GitHub - 1 maintainer
Top 9.3% on bioconductor.org
MAGeCKFlute 2.12.0
Integrative Analysis Pipeline for Pooled CRISPR Functional Genetic Screens
5 versions - Latest release: 3 months ago - 1 dependent package - 40.5 thousand downloads total - 1 maintainer
gCrisprTools 2.14.0
Suite of Functions for Pooled Crispr Screen QC and Analysis
5 versions - Latest release: 3 months ago - 15.9 thousand downloads total - 1 maintainer
TAPseq 1.20.0
Targeted scRNA-seq primer design for TAP-seq
6 versions - Latest release: 3 months ago - 8.81 thousand downloads total - 4 stars on GitHub - 1 maintainer
gscreend 1.22.0
Analysis of pooled genetic screens
6 versions - Latest release: 3 months ago - 8.63 thousand downloads total - 11 stars on GitHub - 1 maintainer
pogos 1.28.0
PharmacOGenomics Ontology Support
5 versions - Latest release: 3 months ago - 1 dependent package - 11.9 thousand downloads total - 1 maintainer
MMAPPR2 1.18.0 removed
Mutation Mapping Analysis Pipeline for Pooled RNA-Seq
3 versions - Latest release: about 1 year ago - 3.62 thousand downloads total - 1 maintainer
Related Keywords
Software 8 CRISPR 6 RNASeq 4 DNASeq 3 Pathways 3 SingleCell 3 SystemsBiology 3 ImmunoOncology 2 Pharmacogenomics 2 Visualization 2 QualityControl 2 Normalization 2 GeneSetEnrichment 2 FunctionalGenomics 2 DifferentialExpression 2 NetworkInference 2 Network 2 GeneExpression 2 ATACSeq 2 Technology 1 Sequencing 1 StatisticalMethod 1 Regression 1 Preprocessing 1 VariantDetection 1 Pharmacogenetics 1 MultipleComparison 1 Genetics 1 ExperimentalDesign 1 CellBiology 1 BiomedicalInformatics 1 KEGG 1 GeneTarget 1 NeuralNetwork 1 GeneSignaling 1 DifferentialMethylation 1 Classification 1