bioconductor.org "GeneSignaling" keyword
Top 3.1% on bioconductor.org
7 versions - Latest release: 5 months ago - 4 dependent packages - 141 thousand downloads total - 1 maintainer
RankProd 3.38.0
Rank Product method for identifying differentially expressed genes with application in meta-analysis7 versions - Latest release: 5 months ago - 4 dependent packages - 141 thousand downloads total - 1 maintainer
ASURAT 1.16.0
Functional annotation-driven unsupervised clustering for single-cell data7 versions - Latest release: 6 months ago - 16.5 thousand downloads total - 1 maintainer
signifinder 1.13.0
Collection and implementation of public transcriptional cancer signatures8 versions - Latest release: 5 months ago - 10.9 thousand downloads total - 9 stars on GitHub - 1 maintainer
sSNAPPY 1.16.0
Single Sample directioNAl Pathway Perturbation analYsis8 versions - Latest release: 6 months ago - 15.4 thousand downloads total - 1 stars on GitHub - 1 maintainer
nempi 1.20.0
Inferring unobserved perturbations from gene expression data7 versions - Latest release: 6 months ago - 13.3 thousand downloads total - 2 stars on GitHub - 1 maintainer
wppi 1.19.0
Weighting protein-protein interactions8 versions - Latest release: 5 months ago - 13.7 thousand downloads total - 1 stars on GitHub - 1 maintainer
OmnipathR 4.0.0
OmniPath web service client and more13 versions - Latest release: 5 months ago - 3 dependent packages - 98.9 thousand downloads total - 1 maintainer
escape 2.8.0
Easy single cell analysis platform for enrichment10 versions - Latest release: 5 months ago - 1 dependent package - 50.6 thousand downloads total - 1 maintainer
cosmosR 1.20.0
COSMOS (Causal Oriented Search of Multi-Omic Space)8 versions - Latest release: 5 months ago - 20.9 thousand downloads total - 68 stars on GitHub - 1 maintainer
hipathia 3.12.0
HiPathia: High-throughput Pathway Analysis7 versions - Latest release: 6 months ago - 34.6 thousand downloads total - 1 maintainer
pathwayPCA 1.28.0
Integrative Pathway Analysis with Modern PCA Methodology and Gene Selection7 versions - Latest release: 5 months ago - 1 dependent package - 24.7 thousand downloads total - 11 stars on GitHub - 1 maintainer
Top 9.8% on bioconductor.org
8 versions - Latest release: 5 months ago - 1 dependent package - 52.9 thousand downloads total - 1 maintainer
EGSEA 1.40.0
Ensemble of Gene Set Enrichment Analyses8 versions - Latest release: 5 months ago - 1 dependent package - 52.9 thousand downloads total - 1 maintainer
MetaboSignal 1.42.1
MetaboSignal: a network-based approach to overlay and explore metabolic and signaling KEGG pathways9 versions - Latest release: 3 months ago - 31.8 thousand downloads total - 2 maintainers
pwOmics 1.36.0 removed
Pathway-based data integration of omics data3 versions - Latest release: over 2 years ago - 15.7 thousand downloads total - 1 maintainer
Related Keywords
Software
14
Pathways
9
GeneExpression
8
SystemsBiology
7
GeneTarget
6
Network
6
GraphAndNetwork
5
SingleCell
5
Transcriptomics
4
Classification
4
GeneSetEnrichment
4
Metabolomics
4
Proteomics
4
DifferentialExpression
3
KEGG
3
RNASeq
3
Sequencing
3
Annotation
3
Microarray
3
Genetics
2
ImmunoOncology
2
MultipleComparison
2
Transcription
2
CellBiology
2
Lipidomics
2
GO
2
ResearchField
1
CopyNumberVariation
1
DNAMethylation
1
DimensionReduction
1
Epigenetics
1
FeatureExtraction
1
FunctionalGenomics
1
GenePrediction
1
GenomeWideAssociation
1
GenomicVariation
1
PrincipalComponent
1
Regression
1
SNP
1
Survival
1
BiomedicalInformatics
1
ReportWriting
1
Spatial
1
Visualization
1
gene-ontology
1
gene-prioritization
1
human-phenotype-ontology
1
omnipath
1
ppi-networks
1
random-walk-with-restart
1
StatisticalMethod
1
Reactome
1
ThirdPartyClient
1
GeneRegulation
1
NetworkEnrichment
1
OneChannel
1
DataRepresentation
1
TwoChannel
1
Clustering
1
DataImport
1
data-integration
1
metabolomic-data
1
network-modelling
1
phosphoproteomics
1
proteomics
1
transcriptomics
1
ATACSeq
1
CRISPR
1
DNASeq
1
DifferentialMethylation
1
NetworkInference
1
NeuralNetwork
1
PooledScreens
1