Ecosyste.ms: Packages

Software 168 Sequencing 75 Preprocessing 72 GeneExpression 70 DifferentialExpression 67 QualityControl 61 RNASeq 61 ImmunoOncology 58 Transcriptomics 42 Clustering 38 SingleCell 37 BatchEffect 36 Microarray 33 Visualization 32 MultipleComparison 31 DataImport 31 Transcription 28 Proteomics 27 Regression 26 MassSpectrometry 23 Coverage 22 DNAMethylation 18 Bayesian 16 GeneSetEnrichment 16 TwoChannel 15 Classification 15 PrincipalComponent 13 ChIPSeq 13 BiomedicalInformatics 12 FunctionalGenomics 12 Epigenetics 12 StatisticalMethod 12 TimeCourse 12 OneChannel 12 DimensionReduction 11 SystemsBiology 11 r 10 GeneRegulation 10 MethylationArray 10 Genetics 10 Alignment 10 CopyNumberVariation 9 Network 9 mRNAMicroarray 9 DifferentialMethylation 9 bioconductor 9 AlternativeSplicing 8 GraphAndNetwork 8 Microbiome 8 CellBiology 8 Metabolomics 8 DifferentialSplicing 8 Infrastructure 8 Pathways 7 GUI 7 DataRepresentation 7 HiC 7 single-cell 7 ProprietaryPlatforms 6 Annotation 6 WorkflowStep 6 KEGG 5 ExperimentalDesign 5 ReportWriting 5 bioinformatics 5 r-package 5 ATACSeq 5 normalization 5 DifferentialPeakCalling 5 AssayDomain 5 Metagenomics 5 CellBasedAssays 4 Lipidomics 4 genomics 4 MicroRNAArray 4 rstats 4 transcriptomics 4 PeakDetection 4 FlowCytometry 3 DNA3DStructure 3 SupportVectorMachine 3 ExonArray 3 FeatureExtraction 3 Spatial 3 Survival 3 NetworkInference 3 GeneticVariability 3 microbiome 3 bayesian 3 tidyverse 3 BiologicalQuestion 3 Cheminformatics 3 proteomics 3 DecisionTree 2 GO 2 rna-seq 2 RIPSeq 2 DNASeq 2 WholeGenome 2 MultiChannel 2