Ecosyste.ms: Packages

Software 607 RNASeq 259 DifferentialExpression 239 Sequencing 217 Transcriptomics 167 ImmunoOncology 154 SingleCell 146 Microarray 139 Transcription 133 Visualization 115 Clustering 114 GeneSetEnrichment 96 Preprocessing 78 Network 78 Regression 72 Normalization 70 Pathways 68 DataImport 67 MultipleComparison 67 GeneRegulation 66 QualityControl 66 Genetics 63 Classification 57 StatisticalMethod 55 SystemsBiology 55 GraphAndNetwork 53 Bayesian 49 Coverage 44 NetworkInference 38 DimensionReduction 38 GO 37 r 34 BatchEffect 33 FunctionalGenomics 32 bioconductor 32 AlternativeSplicing 32 Proteomics 31 NetworkEnrichment 31 BiomedicalInformatics 30 Epigenetics 29 TimeCourse 29 FeatureExtraction 28 DNAMethylation 28 DataRepresentation 28 DifferentialSplicing 27 Spatial 27 KEGG 26 GeneTarget 25 SNP 24 CellBiology 23 mRNAMicroarray 23 GUI 22 PrincipalComponent 22 Annotation 22 ChIPSeq 21 Survival 21 bioinformatics 20 OneChannel 20 DifferentialMethylation 17 transcriptomics 15 rna-seq 15 Infrastructure 15 single-cell 15 ATACSeq 14 CellBasedAssays 14 gene-expression 14 TwoChannel 14 MethylationArray 13 Metabolomics 13 ReportWriting 13 GenePrediction 13 bioconductor-package 13 CopyNumberVariation 12 genomics 11 FunctionalPrediction 11 ExonArray 11 Alignment 11 GenomeWideAssociation 11 Reactome 10 AssayDomain 9 GenomeAnnotation 9 GeneticVariability 9 rstats 9 ProprietaryPlatforms 8 GeneSignaling 8 single-cell-rna-seq 8 ExperimentalDesign 8 WorkflowStep 8 differential-expression 8 scrna-seq 7 DNASeq 7 ShinyApps 7 Pharmacogenomics 6 Pharmacogenetics 6 qPCR 6 gene 6 rnaseq 6 MicroRNAArray 6 r-package 6 GenomicVariation 5