bioconductor.org "Pathways" keyword
oppar 1.40.0
Outlier profile and pathway analysis in R8 versions - Latest release: about 1 hour ago - 19.3 thousand downloads total - 1 maintainer
Top 1.2% on bioconductor.org
20 versions - Latest release: 24 days ago - 59 dependent packages - 2.57 million downloads total - 1 maintainer
clusterProfiler 4.20.0
A Universal Enrichment Tool for Interpreting Omics Data20 versions - Latest release: 24 days ago - 59 dependent packages - 2.57 million downloads total - 1 maintainer
Top 1.0% on bioconductor.org
11 versions - Latest release: 24 days ago - 38 dependent packages - 2.43 million downloads total - 345 stars on GitHub - 1 maintainer
fgsea 1.38.0
Fast Gene Set Enrichment Analysis11 versions - Latest release: 24 days ago - 38 dependent packages - 2.43 million downloads total - 345 stars on GitHub - 1 maintainer
Top 0.9% on bioconductor.org
8 versions - Latest release: 25 days ago - 48 dependent packages - 4.86 million downloads total - 1 maintainer
annotate 1.90.0
Annotation for microarrays8 versions - Latest release: 25 days ago - 48 dependent packages - 4.86 million downloads total - 1 maintainer
Top 1.9% on bioconductor.org
22 versions - Latest release: 24 days ago - 15 dependent packages - 2.42 million downloads total - 1 maintainer
enrichplot 1.32.0
Visualization of Functional Enrichment Result22 versions - Latest release: 24 days ago - 15 dependent packages - 2.42 million downloads total - 1 maintainer
Top 1.6% on bioconductor.org
14 versions - Latest release: 24 days ago - 27 dependent packages - 2.37 million downloads total - 1 maintainer
DOSE 4.6.0
Disease Ontology Semantic and Enrichment analysis14 versions - Latest release: 24 days ago - 27 dependent packages - 2.37 million downloads total - 1 maintainer
attract 1.64.0
Methods to Find the Gene Expression Modules that Represent the Drivers of Kauffman's Attractor La...7 versions - Latest release: 1 day ago - 43.3 thousand downloads total - 1 maintainer
Top 0.6% on bioconductor.org
27 versions - Latest release: 24 days ago - 181 dependent packages - 4.42 million downloads total - 4 maintainers
edgeR 4.10.0
Empirical Analysis of Digital Gene Expression Data in R27 versions - Latest release: 24 days ago - 181 dependent packages - 4.42 million downloads total - 4 maintainers
gep2pep 1.31.0
Creation and Analysis of Pathway Expression Profiles (PEPs)7 versions - Latest release: 2 days ago - 15.5 thousand downloads total - 1 maintainer
GeneTonic 3.6.0
Enjoy Analyzing And Integrating The Results From Differential Expression Analysis And Functional ...7 versions - Latest release: 2 days ago - 1 dependent package - 23.6 thousand downloads total - 81 stars on GitHub - 1 maintainer
PanomiR 1.16.0
Detection of miRNAs that regulate interacting groups of pathways7 versions - Latest release: 2 days ago - 9.31 thousand downloads total - 3 stars on GitHub - 1 maintainer
padma 1.22.0
Individualized Multi-Omic Pathway Deviation Scores Using Multiple Factor Analysis9 versions - Latest release: 3 days ago - 11.6 thousand downloads total - 3 stars on GitHub - 1 maintainer
Top 8.9% on bioconductor.org
7 versions - Latest release: 3 days ago - 6 dependent packages - 52 thousand downloads total - 1 maintainer
CellNOptR 1.58.0
Training of boolean logic models of signalling networks using prior knowledge networks and pertur...7 versions - Latest release: 3 days ago - 6 dependent packages - 52 thousand downloads total - 1 maintainer
PCAN 1.40.0
Phenotype Consensus ANalysis (PCAN)7 versions - Latest release: 3 days ago - 20.1 thousand downloads total - 1 maintainer
epiNEM 1.36.0
epiNEM7 versions - Latest release: 4 days ago - 4 dependent packages - 21.6 thousand downloads total - 1 stars on GitHub - 1 maintainer
Top 3.0% on bioconductor.org
7 versions - Latest release: 5 days ago - 4 dependent packages - 237 thousand downloads total - 5 stars on GitHub - 1 maintainer
gage 2.62.0
Generally Applicable Gene-set Enrichment for Pathway Analysis7 versions - Latest release: 5 days ago - 4 dependent packages - 237 thousand downloads total - 5 stars on GitHub - 1 maintainer
mirIntegrator 1.42.0
Integrating microRNA expression into signaling pathways for pathway analysis7 versions - Latest release: 5 days ago - 21.2 thousand downloads total - 1 stars on GitHub - 1 maintainer
Top 7.5% on bioconductor.org
7 versions - Latest release: 5 days ago - 41.2 thousand downloads total - 1 maintainer
miRNApath 1.72.0
miRNApath: Pathway Enrichment for miRNA Expression Data7 versions - Latest release: 5 days ago - 41.2 thousand downloads total - 1 maintainer
Path2PPI 1.42.0
Prediction of pathway-related protein-protein interaction networks7 versions - Latest release: 5 days ago - 21.8 thousand downloads total - 1 maintainer
CBN2Path 1.2.0
CBN2Path: an R/Bioconductor package for the analysis of cancer progression pathways using Conjunc...3 versions - Latest release: 6 days ago - 1.93 thousand downloads total - 0 stars on GitHub - 2 maintainers
RCX 1.16.0
R package implementing the Cytoscape Exchange (CX) format10 versions - Latest release: 7 days ago - 1 dependent package - 11.2 thousand downloads total - 8 stars on GitHub - 1 maintainer
ReactomeGraph4R 1.18.0 removed
Interface for the Reactome Graph Database7 versions - Latest release: 6 months ago - 4.74 thousand downloads total - 6 stars on GitHub - 1 maintainer
bnem 1.20.0
Training of logical models from indirect measurements of perturbation experiments7 versions - Latest release: 7 days ago - 10.8 thousand downloads total - 2 stars on GitHub - 1 maintainer
fedup 1.19.0
Fisher's Test for Enrichment and Depletion of User-Defined Pathways7 versions - Latest release: 8 days ago - 10 thousand downloads total - 7 stars on GitHub - 1 maintainer
Top 2.6% on bioconductor.org
7 versions - Latest release: 8 days ago - 13 dependent packages - 613 thousand downloads total - 1 maintainer
Category 2.78.0
Category Analysis7 versions - Latest release: 8 days ago - 13 dependent packages - 613 thousand downloads total - 1 maintainer
CEMiTool 1.36.0
Co-expression Modules identification Tool9 versions - Latest release: 8 days ago - 42.3 thousand downloads total - 1 maintainer
pairkat 1.18.0
PaIRKAT7 versions - Latest release: 8 days ago - 9.52 thousand downloads total - 0 stars on GitHub - 1 maintainer
TMSig 1.6.0
Tools for Molecular Signatures4 versions - Latest release: 8 days ago - 4.28 thousand downloads total - 4 stars on GitHub - 1 maintainer
Top 8.0% on bioconductor.org
7 versions - Latest release: 8 days ago - 40.8 thousand downloads total - 1 maintainer
pathRender 1.80.0
Render molecular pathways7 versions - Latest release: 8 days ago - 40.8 thousand downloads total - 1 maintainer
ADAM 1.28.0
ADAM: Activity and Diversity Analysis Module7 versions - Latest release: 9 days ago - 1 dependent package - 18.2 thousand downloads total - 1 maintainer
CHRONOS 1.40.0
CHRONOS: A time-varying method for microRNA-mediated sub-pathway enrichment analysis7 versions - Latest release: 9 days ago - 20.4 thousand downloads total - 1 maintainer
GeDi 1.7.1
Defining and visualizing the distances between different genesets7 versions - Latest release: 10 days ago - 6.33 thousand downloads total - 2 stars on GitHub - 1 maintainer
Top 3.7% on bioconductor.org
7 versions - Latest release: 10 days ago - 2 dependent packages - 114 thousand downloads total - 1 maintainer
safe 3.52.1
Significance Analysis of Function and Expression7 versions - Latest release: 10 days ago - 2 dependent packages - 114 thousand downloads total - 1 maintainer
MOSClip 1.6.0
Multi Omics Survival Clip7 versions - Latest release: 10 days ago - 4.49 thousand downloads total - 0 stars on GitHub - 1 maintainer
iSEEpathways 1.10.0
iSEE extension for panels related to pathway analysis6 versions - Latest release: 10 days ago - 7.23 thousand downloads total - 2 stars on GitHub - 1 maintainer
easier 1.18.0
Estimate Systems Immune Response from RNA-seq data7 versions - Latest release: 10 days ago - 13.4 thousand downloads total - 1 maintainer
GSEABenchmarkeR 1.32.0
Reproducible GSEA Benchmarking8 versions - Latest release: 11 days ago - 2 dependent packages - 20 thousand downloads total - 13 stars on GitHub - 1 maintainer
ggkegg 1.10.0
Analyzing and visualizing KEGG information using the grammar of graphics17 versions - Latest release: 11 days ago - 22.8 thousand downloads total - 235 stars on GitHub - 1 maintainer
NetActivity 1.14.0
Compute gene set scores from a deep learning framework7 versions - Latest release: 11 days ago - 8.15 thousand downloads total - 1 maintainer
Top 2.7% on bioconductor.org
7 versions - Latest release: 11 days ago - 5 dependent packages - 313 thousand downloads total - 2 stars on GitHub - 1 maintainer
goseq 1.64.0
Gene Ontology analyser for RNA-seq and other length biased data7 versions - Latest release: 11 days ago - 5 dependent packages - 313 thousand downloads total - 2 stars on GitHub - 1 maintainer
MetaboSignal 1.42.0
MetaboSignal: a network-based approach to overlay and explore metabolic and signaling KEGG pathways8 versions - Latest release: 11 days ago - 24.1 thousand downloads total - 2 maintainers
Top 2.2% on bioconductor.org
20 versions - Latest release: 12 days ago - 15 dependent packages - 815 thousand downloads total - 227 stars on GitHub - 1 maintainer
GSVA 2.6.1
Gene Set Variation Analysis for Microarray and RNA-Seq Data20 versions - Latest release: 12 days ago - 15 dependent packages - 815 thousand downloads total - 227 stars on GitHub - 1 maintainer
Top 2.3% on bioconductor.org
7 versions - Latest release: 12 days ago - 23 dependent packages - 598 thousand downloads total - 1 maintainer
GOstats 2.78.0
Tools for manipulating GO and microarrays7 versions - Latest release: 12 days ago - 23 dependent packages - 598 thousand downloads total - 1 maintainer
tidysbml 1.6.0
Extract SBML's data into dataframes4 versions - Latest release: 12 days ago - 4.28 thousand downloads total - 1 stars on GitHub - 1 maintainer
scGraphVerse 1.2.0
scGraphVerse: A Gene Network Analysis Package2 versions - Latest release: 12 days ago - 1.5 thousand downloads total - 1 stars on GitHub - 1 maintainer
Top 9.8% on bioconductor.org
7 versions - Latest release: 12 days ago - 1 dependent package - 37.2 thousand downloads total - 1 maintainer
FGNet 3.46.0
Functional Gene Networks derived from biological enrichment analyses7 versions - Latest release: 12 days ago - 1 dependent package - 37.2 thousand downloads total - 1 maintainer
Top 2.8% on bioconductor.org
7 versions - Latest release: 12 days ago - 15 dependent packages - 627 thousand downloads total - 1 maintainer
ReactomePA 1.56.0
Reactome Pathway Analysis7 versions - Latest release: 12 days ago - 15 dependent packages - 627 thousand downloads total - 1 maintainer
DEsubs 1.38.0
DEsubs: an R package for flexible identification of differentially expressed subpathways using RN...7 versions - Latest release: 12 days ago - 20.6 thousand downloads total - 2 maintainers
Top 6.4% on bioconductor.org
7 versions - Latest release: 12 days ago - 2 dependent packages - 397 thousand downloads total - 1 maintainer
annaffy 1.84.0
Annotation tools for Affymetrix biological metadata7 versions - Latest release: 12 days ago - 2 dependent packages - 397 thousand downloads total - 1 maintainer
bioCancer 1.40.0
Interactive Multi-Omics Cancers Data Visualization and Analysis9 versions - Latest release: 12 days ago - 21.6 thousand downloads total - 21 stars on GitHub - 1 maintainer
CBNplot 1.12.0
plot bayesian network inferred from gene expression data based on enrichment analysis results9 versions - Latest release: 12 days ago - 10.6 thousand downloads total - 56 stars on GitHub - 1 maintainer
Top 2.7% on bioconductor.org
7 versions - Latest release: 12 days ago - 11 dependent packages - 421 thousand downloads total - 8 stars on GitHub - 1 maintainer
graphite 1.58.0
GRAPH Interaction from pathway Topological Environment7 versions - Latest release: 12 days ago - 11 dependent packages - 421 thousand downloads total - 8 stars on GitHub - 1 maintainer
Top 2.7% on bioconductor.org
7 versions - Latest release: 12 days ago - 6 dependent packages - 312 thousand downloads total - 1 maintainer
globaltest 5.66.0
Testing Groups of Covariates/Features for Association with a Response Variable, with Applications...7 versions - Latest release: 12 days ago - 6 dependent packages - 312 thousand downloads total - 1 maintainer
hypeR 2.10.0
An R Package For Geneset Enrichment Workflows8 versions - Latest release: 13 days ago - 19.6 thousand downloads total - 79 stars on GitHub - 1 maintainer
PAST 1.28.0
Pathway Association Study Tool (PAST)7 versions - Latest release: 13 days ago - 13.7 thousand downloads total - 5 stars on GitHub - 1 maintainer
KnowSeq 1.25.0
KnowSeq R/Bioc package: The Smart Transcriptomic Pipeline7 versions - Latest release: 13 days ago - 15.4 thousand downloads total - 1 maintainer
Top 4.9% on bioconductor.org
7 versions - Latest release: 13 days ago - 3 dependent packages - 66.1 thousand downloads total - 1 maintainer
rsbml 2.70.0
R support for SBML, using libsbml7 versions - Latest release: 13 days ago - 3 dependent packages - 66.1 thousand downloads total - 1 maintainer
BioCor 1.36.0
Functional Similarities7 versions - Latest release: 13 days ago - 23.5 thousand downloads total - 14 stars on GitHub - 1 maintainer
DeeDeeExperiment 1.2.0
DeeDeeExperiment: An S4 Class for managing and exploring omics analysis results2 versions - Latest release: 14 days ago - 1.85 thousand downloads total - 0 stars on GitHub - 1 maintainer
BioCartaImage 1.10.0
BioCarta Pathway Images7 versions - Latest release: 14 days ago - 6.7 thousand downloads total - 11 stars on GitHub - 1 maintainer
GenomicSuperSignature 1.20.0
Interpretation of RNA-seq experiments through robust, efficient comparison to public databases8 versions - Latest release: 14 days ago - 11.4 thousand downloads total - 12 stars on GitHub - 1 maintainer
escape 2.8.0
Easy single cell analysis platform for enrichment10 versions - Latest release: 14 days ago - 1 dependent package - 38.9 thousand downloads total - 1 maintainer
npGSEA 1.48.0
Permutation approximation methods for gene set enrichment analysis (non-permutation GSEA)7 versions - Latest release: 14 days ago - 27.5 thousand downloads total - 1 maintainer
Top 4.0% on bioconductor.org
7 versions - Latest release: 14 days ago - 150 thousand downloads total - 1 maintainer
GlobalAncova 4.30.0
Global test for groups of variables via model comparisons7 versions - Latest release: 14 days ago - 150 thousand downloads total - 1 maintainer
Top 9.8% on bioconductor.org
8 versions - Latest release: 14 days ago - 1 dependent package - 42.9 thousand downloads total - 1 maintainer
EGSEA 1.40.0
Ensemble of Gene Set Enrichment Analyses8 versions - Latest release: 14 days ago - 1 dependent package - 42.9 thousand downloads total - 1 maintainer
esetVis 1.38.0
Visualizations of expressionSet Bioconductor object8 versions - Latest release: 14 days ago - 21.7 thousand downloads total - 1 maintainer
metapone 1.18.0
Conducts pathway test of metabolomics data using a weighted permutation test7 versions - Latest release: 14 days ago - 9.68 thousand downloads total - 1 maintainer
dmGsea 1.2.0
Efficient Gene Set Enrichment Analysis for DNA Methylation Data4 versions - Latest release: 14 days ago - 2.95 thousand downloads total - 1 maintainer
LiquidAssociation 1.66.0
LiquidAssociation7 versions - Latest release: 15 days ago - 1 dependent package - 36.4 thousand downloads total - 1 maintainer
DART 1.60.0
Denoising Algorithm based on Relevance network Topology7 versions - Latest release: 15 days ago - 34.4 thousand downloads total - 1 maintainer
PPInfer 1.38.0
Inferring functionally related proteins using protein interaction networks7 versions - Latest release: 15 days ago - 1 dependent package - 22.1 thousand downloads total - 1 maintainer
cpvSNP 1.44.0
Gene set analysis methods for SNP association p-values that lie in genes in given gene sets7 versions - Latest release: 15 days ago - 22.7 thousand downloads total - 1 maintainer
Top 2.3% on bioconductor.org
8 versions - Latest release: 15 days ago - 26 dependent packages - 606 thousand downloads total - 0 stars on GitHub - 1 maintainer
topGO 2.64.0
Enrichment Analysis for Gene Ontology8 versions - Latest release: 15 days ago - 26 dependent packages - 606 thousand downloads total - 0 stars on GitHub - 1 maintainer
Top 3.9% on bioconductor.org
7 versions - Latest release: 15 days ago - 9 dependent packages - 715 thousand downloads total - 41 stars on GitHub - 1 maintainer
pathview 1.52.0
a tool set for pathway based data integration and visualization7 versions - Latest release: 15 days ago - 9 dependent packages - 715 thousand downloads total - 41 stars on GitHub - 1 maintainer
goSorensen 1.14.0
Statistical inference based on the Sorensen-Dice dissimilarity and the Gene Ontology (GO)7 versions - Latest release: 16 days ago - 8.2 thousand downloads total - 1 maintainer
Top 10.0% on bioconductor.org
7 versions - Latest release: 16 days ago - 1 dependent package - 38.8 thousand downloads total - 5 stars on GitHub - 1 maintainer
mgsa 1.60.0
Model-based gene set analysis7 versions - Latest release: 16 days ago - 1 dependent package - 38.8 thousand downloads total - 5 stars on GitHub - 1 maintainer
GWENA 1.22.0
Pipeline for augmented co-expression analysis7 versions - Latest release: 16 days ago - 17.5 thousand downloads total - 18 stars on GitHub - 1 maintainer
coRdon 1.30.0
Codon Usage Analysis and Prediction of Gene Expressivity7 versions - Latest release: 16 days ago - 26.7 thousand downloads total - 23 stars on GitHub - 1 maintainer
PathNet 1.52.0
An R package for pathway analysis using topological information7 versions - Latest release: 16 days ago - 29.4 thousand downloads total - 1 maintainer
ndexr 1.34.0
NDEx R client library7 versions - Latest release: 16 days ago - 17.8 thousand downloads total - 9 stars on GitHub - 1 maintainer
GOexpress 1.46.0
Visualise microarray and RNAseq data using gene ontology annotations7 versions - Latest release: 16 days ago - 1 dependent package - 35.9 thousand downloads total - 9 stars on GitHub - 1 maintainer
ssPATHS 1.26.0
ssPATHS: Single Sample PATHway Score7 versions - Latest release: 16 days ago - 11.7 thousand downloads total - 1 maintainer
mitology 1.4.0
Study of mitochondrial activity from RNA-seq data3 versions - Latest release: 17 days ago - 3.7 thousand downloads total - 2 stars on GitHub - 1 maintainer
BLMA 1.36.0
BLMA: A package for bi-level meta-analysis7 versions - Latest release: 18 days ago - 20.5 thousand downloads total - 1 maintainer
Top 9.0% on bioconductor.org
7 versions - Latest release: 18 days ago - 2 dependent packages - 42.4 thousand downloads total - 1 maintainer
MLP 1.60.0
Mean Log P Analysis7 versions - Latest release: 18 days ago - 2 dependent packages - 42.4 thousand downloads total - 1 maintainer
Moonlight2R 1.10.0
Identify oncogenes and tumor suppressor genes from omics data8 versions - Latest release: 18 days ago - 7.4 thousand downloads total - 5 stars on GitHub - 1 maintainer
nempi 1.20.0
Inferring unobserved perturbations from gene expression data7 versions - Latest release: 18 days ago - 9.91 thousand downloads total - 2 stars on GitHub - 1 maintainer
NetPathMiner 1.48.0
NetPathMiner for Biological Network Construction, Path Mining and Visualization7 versions - Latest release: 19 days ago - 28.2 thousand downloads total - 9 stars on GitHub - 1 maintainer
Top 5.7% on bioconductor.org
8 versions - Latest release: 19 days ago - 3 dependent packages - 88.6 thousand downloads total - 95 stars on GitHub - 1 maintainer
rGREAT 2.14.0
GREAT Analysis - Functional Enrichment on Genomic Regions8 versions - Latest release: 19 days ago - 3 dependent packages - 88.6 thousand downloads total - 95 stars on GitHub - 1 maintainer
DeepTarget 1.6.0
Deep characterization of cancer drugs4 versions - Latest release: 21 days ago - 4.64 thousand downloads total - 1 maintainer
islify 1.4.0
Automatic scoring and classification of cell-based assay images3 versions - Latest release: 21 days ago - 3.09 thousand downloads total - 1 maintainer
Top 7.8% on bioconductor.org
7 versions - Latest release: 21 days ago - 1 dependent package - 56.7 thousand downloads total - 1 maintainer
keggorthology 2.64.0
graph support for KO, KEGG Orthology7 versions - Latest release: 21 days ago - 1 dependent package - 56.7 thousand downloads total - 1 maintainer
hipathia 3.12.0
HiPathia: High-throughput Pathway Analysis7 versions - Latest release: 22 days ago - 21.4 thousand downloads total - 1 maintainer
cogena 1.46.0
co-expressed gene-set enrichment analysis7 versions - Latest release: 22 days ago - 28.3 thousand downloads total - 12 stars on GitHub - 1 maintainer
pairedGSEA 1.12.0
Paired DGE and DGS analysis for gene set enrichment analysis7 versions - Latest release: 22 days ago - 6.68 thousand downloads total - 2 stars on GitHub - 1 maintainer
Top 6.5% on bioconductor.org
7 versions - Latest release: 22 days ago - 1 dependent package - 55.1 thousand downloads total - 1 maintainer
goProfiles 1.74.0
goProfiles: an R package for the statistical analysis of functional profiles7 versions - Latest release: 22 days ago - 1 dependent package - 55.1 thousand downloads total - 1 maintainer
Top 2.7% on bioconductor.org
9 versions - Latest release: 23 days ago - 7 dependent packages - 594 thousand downloads total - 339 stars on GitHub - 2 maintainers
TCGAbiolinks 2.40.0
TCGAbiolinks: An R/Bioconductor package for integrative analysis with GDC data9 versions - Latest release: 23 days ago - 7 dependent packages - 594 thousand downloads total - 339 stars on GitHub - 2 maintainers
pathlinkR 1.8.0
Analyze and interpret RNA-Seq results6 versions - Latest release: 23 days ago - 6.9 thousand downloads total - 30 stars on GitHub - 1 maintainer
Top 9.8% on bioconductor.org
7 versions - Latest release: 23 days ago - 33.8 thousand downloads total - 1 maintainer
occugene 1.72.0
Functions for Multinomial Occupancy Distribution7 versions - Latest release: 23 days ago - 33.8 thousand downloads total - 1 maintainer
multiGSEA 1.22.0
Combining GSEA-based pathway enrichment with multi omics data integration8 versions - Latest release: 24 days ago - 18.2 thousand downloads total - 20 stars on GitHub - 1 maintainer
Related Keywords
Software
173
GeneSetEnrichment
83
GeneExpression
77
Network
62
GraphAndNetwork
48
KEGG
44
GO
43
DifferentialExpression
43
Visualization
40
RNASeq
37
SystemsBiology
33
Annotation
31
Microarray
30
NetworkEnrichment
25
Sequencing
24
Reactome
23
Clustering
23
Transcriptomics
20
ImmunoOncology
20
MultipleComparison
19
Genetics
17
Metabolomics
17
Transcription
16
Proteomics
15
NetworkInference
15
Classification
14
DataImport
13
GeneRegulation
13
r
11
StatisticalMethod
11
Regression
11
FunctionalGenomics
11
BiomedicalInformatics
11
SingleCell
10
GeneTarget
10
GeneSignaling
9
bioconductor
9
DataRepresentation
8
bioinformatics
8
TimeCourse
8
Survival
8
CellBiology
8
DNAMethylation
8
GenePrediction
7
Bayesian
7
DifferentialMethylation
7
PrincipalComponent
7
QualityControl
7
Normalization
7
ReportWriting
7
OneChannel
6
AlternativeSplicing
6
Epigenetics
6
Preprocessing
6
FunctionalPrediction
5
ShinyApps
5
GUI
5
DimensionReduction
5
BatchEffect
5
FeatureExtraction
5
ThirdPartyClient
5
pathways
4
mRNAMicroarray
4
GenomicVariation
4
Infrastructure
4
Coverage
4
MethylationArray
4
bioconductor-package
4
GeneticVariability
4
CRISPR
4
BioCarta
4
miRNA
4
shiny
4
visualization
3
pathway-analysis
3
DifferentialSplicing
3
r-package
3
PooledScreens
3
transcriptomics
3
enrichment-analysis
3
SNP
3
ATACSeq
3
GenomeWideAssociation
3
TwoChannel
3
genomics
2
pathway-enrichment-analysis
2
MathematicalBiology
2
cancer
2
gene-ontology
2
computational-biology
2
SomaticMutation
2
ontology
2
gene
2
gsea
2
MassSpectrometry
2
networks
2
GenomeAnnotation
2
Cheminformatics
2
CopyNumberVariation
2
DNASeq
2