bioconductor.org "human-cell-atlas" keyword
View the packages on the bioconductor.org package registry that are tagged with the "human-cell-atlas" keyword.
Top 6.9% on bioconductor.org
5 versions - Latest release: 3 months ago - 1 dependent package - 53.5 thousand downloads total - 29 stars on GitHub - 1 maintainer
M3Drop 1.34.0
Michaelis-Menten Modelling of Dropouts in single-cell RNASeq5 versions - Latest release: 3 months ago - 1 dependent package - 53.5 thousand downloads total - 29 stars on GitHub - 1 maintainer
Top 8.0% on bioconductor.org
6 versions - Latest release: 3 months ago - 15 dependent packages - 1.31 million downloads total - 5 stars on GitHub - 1 maintainer
beachmat 2.24.0
Compiling Bioconductor to Handle Each Matrix Type6 versions - Latest release: 3 months ago - 15 dependent packages - 1.31 million downloads total - 5 stars on GitHub - 1 maintainer
Top 9.3% on bioconductor.org
5 versions - Latest release: 3 months ago - 28 dependent packages - 1 million downloads total - 8 stars on GitHub - 1 maintainer
BiocSingular 1.24.0
Singular Value Decomposition for Bioconductor Packages5 versions - Latest release: 3 months ago - 28 dependent packages - 1 million downloads total - 8 stars on GitHub - 1 maintainer
Top 5.5% on bioconductor.org
5 versions - Latest release: 2 months ago - 8 dependent packages - 46.3 thousand downloads total - 228 stars on GitHub - 1 maintainer
iSEE 2.20.0
Interactive SummarizedExperiment Explorer5 versions - Latest release: 2 months ago - 8 dependent packages - 46.3 thousand downloads total - 228 stars on GitHub - 1 maintainer
Top 2.1% on bioconductor.org
7 versions - Latest release: 3 months ago - 62 dependent packages - 510 thousand downloads total - 41 stars on GitHub - 1 maintainer
scran 1.36.0
Methods for Single-Cell RNA-Seq Data Analysis7 versions - Latest release: 3 months ago - 62 dependent packages - 510 thousand downloads total - 41 stars on GitHub - 1 maintainer
Top 4.4% on bioconductor.org
5 versions - Latest release: 3 months ago - 4 dependent packages - 72.9 thousand downloads total - 125 stars on GitHub - 1 maintainer
SC3 1.36.0
Single-Cell Consensus Clustering5 versions - Latest release: 3 months ago - 4 dependent packages - 72.9 thousand downloads total - 125 stars on GitHub - 1 maintainer
mbkmeans 1.24.0
Mini-batch K-means Clustering for Single-Cell RNA-seq5 versions - Latest release: 3 months ago - 3 dependent packages - 49.5 thousand downloads total - 9 stars on GitHub - 1 maintainer
CuratedAtlasQueryR 1.6.0
Queries the Human Cell Atlas5 versions - Latest release: 3 months ago - 4.42 thousand downloads total - 90 stars on GitHub - 1 maintainer
Top 9.9% on bioconductor.org
5 versions - Latest release: 3 months ago - 36 thousand downloads total - 86 stars on GitHub - 1 maintainer
scmap 1.30.0
A tool for unsupervised projection of single cell RNA-seq data5 versions - Latest release: 3 months ago - 36 thousand downloads total - 86 stars on GitHub - 1 maintainer
Related Keywords
Software
9
Transcriptomics
7
GeneExpression
6
RNASeq
6
Sequencing
5
SingleCell
5
Clustering
5
bioconductor-package
5
DimensionReduction
4
Transcription
4
ImmunoOncology
4
single-cell-rna-seq
4
Visualization
3
DataRepresentation
3
DifferentialExpression
3
single-cell
3
Normalization
2
Classification
2
SupportVectorMachine
2
clustering
2
FeatureExtraction
2
GUI
2
DataImport
2
Infrastructure
2
singlecellexperiment
1
hdf5
1
tidyverse
1
Preprocessing
1
duckdb
1
database
1
QualityControl
1
AssayDomain
1
projection-mapping
1
r
1
visualization
1
transcriptomics
1
shiny
1
hacktoberfest
1
gui
1
gene-expression
1
feature-extraction
1
dimension-reduction
1
rna-seq
1
ShinyApps
1
CellBasedAssays
1
singular-value-decomposition
1
PrincipalComponent
1
matrix-library
1