bioconductor.org "ShinyApps" keyword
ChromSCape 1.22.0
Analysis of single-cell epigenomics datasets with a Shiny App7 versions - Latest release: 5 months ago - 28.9 thousand downloads total - 15 stars on GitHub - 1 maintainer
scanMiRApp 1.18.0
scanMiR shiny application8 versions - Latest release: 5 months ago - 21.4 thousand downloads total - 1 maintainer
MSstatsShiny 1.14.0
MSstats GUI for Statistical Anaylsis of Proteomics Experiments12 versions - Latest release: 6 months ago - 19.6 thousand downloads total - 9 stars on GitHub - 1 maintainer
Top 5.5% on bioconductor.org
7 versions - Latest release: 5 months ago - 8 dependent packages - 82.2 thousand downloads total - 231 stars on GitHub - 1 maintainer
iSEE 2.24.0
Interactive SummarizedExperiment Explorer7 versions - Latest release: 5 months ago - 8 dependent packages - 82.2 thousand downloads total - 231 stars on GitHub - 1 maintainer
MetCirc 1.42.0
Navigating mass spectral similarity in high-resolution MS/MS metabolomics data metabolomics data7 versions - Latest release: 5 months ago - 32.4 thousand downloads total - 1 maintainer
BiocMaintainerApp 1.0.0
View Bioconductor Package Maintainer Information Interactively1 version - Latest release: 6 months ago - 2.95 thousand downloads total - 0 stars on GitHub - 1 maintainer
GNOSIS 1.10.0
Genomics explorer using statistical and survival analysis in R6 versions - Latest release: 5 months ago - 15.5 thousand downloads total - 7 stars on GitHub - 1 maintainer
ideal 2.6.0
Interactive Differential Expression AnaLysis7 versions - Latest release: 5 months ago - 39.5 thousand downloads total - 34 stars on GitHub - 1 maintainer
carnation 1.0.1
Interactive Exploration & Management of RNA-Seq Analyses2 versions - Latest release: about 2 months ago - 5.48 thousand downloads total - 2 stars on GitHub - 1 maintainer
iSEEhub 1.14.0
iSEE for the Bioconductor ExperimentHub7 versions - Latest release: 6 months ago - 20.9 thousand downloads total - 3 stars on GitHub - 1 maintainer
gDR 1.10.0
Umbrella package for R packages in the gDR suite7 versions - Latest release: 6 months ago - 2 stars on GitHub - 1 maintainer
geyser 1.4.0
Gene Expression displaYer of SummarizedExperiment in R3 versions - Latest release: 5 months ago - 10.6 thousand downloads total - 0 stars on GitHub - 1 maintainer
gDRcore 1.10.0
Processing functions and interface to process and analyze drug dose-response data8 versions - Latest release: 6 months ago - 1 dependent package - 15.1 thousand downloads total - 2 stars on GitHub - 1 maintainer
rawDiag 1.8.0
Brings Orbitrap Mass Spectrometry Data to Life; Fast and Colorful6 versions - Latest release: 6 months ago - 12 thousand downloads total - 37 stars on GitHub - 1 maintainer
TSAR 1.10.0
Thermal Shift Analysis in R6 versions - Latest release: 5 months ago - 12.8 thousand downloads total - 1 maintainer
igvShiny 1.8.3
igvShiny: a wrapper of Integrative Genomics Viewer (IGV - an interactive tool for visualization a...8 versions - Latest release: 5 months ago - 16 thousand downloads total - 46 stars on GitHub - 1 maintainer
goatea 2.0.0
Interactive Exploration of GSEA by the GOAT Method3 versions - Latest release: 5 months ago - 4.24 thousand downloads total - 5 stars on GitHub - 1 maintainer
iSEEfier 1.8.0
Streamlining the creation of initial states for starting an iSEE instance5 versions - Latest release: 5 months ago - 12.9 thousand downloads total - 0 stars on GitHub - 1 maintainer
GeDi 1.7.1
Defining and visualizing the distances between different genesets7 versions - Latest release: 5 months ago - 11.9 thousand downloads total - 3 stars on GitHub - 1 maintainer
GeneTonic 3.6.0
Enjoy Analyzing And Integrating The Results From Differential Expression Analysis And Functional ...7 versions - Latest release: 5 months ago - 1 dependent package - 37.1 thousand downloads total - 82 stars on GitHub - 1 maintainer
bettr 1.8.0
A Better Way To Explore What Is Best5 versions - Latest release: 5 months ago - 13.6 thousand downloads total - 7 stars on GitHub - 1 maintainer
systemPipeShiny 1.22.0
systemPipeShiny: An Interactive Framework for Workflow Management and Visualization7 versions - Latest release: 6 months ago - 16.9 thousand downloads total - 1 maintainer
SmartPhos 1.2.0
A phosphoproteomics data analysis package with an interactive ShinyApp2 versions - Latest release: 6 months ago - 2.65 thousand downloads total - 5 stars on GitHub - 1 maintainer
scafari 1.2.0
Analysis of scDNA-seq data2 versions - Latest release: 6 months ago - 6.16 thousand downloads total - 2 stars on GitHub - 1 maintainer
ExploreModelMatrix 1.24.0
Graphical Exploration of Design Matrices8 versions - Latest release: 5 months ago - 26.1 thousand downloads total - 38 stars on GitHub - 1 maintainer
clevRvis 1.12.0
Visualization Techniques for Clonal Evolution7 versions - Latest release: 6 months ago - 11 thousand downloads total - 6 stars on GitHub - 1 maintainer
squallms 1.6.0
Speedy quality assurance via lasso labeling for LC-MS data4 versions - Latest release: 6 months ago - 8.6 thousand downloads total - 3 stars on GitHub - 1 maintainer
RFLOMICS 1.4.2
Interactive web application for Omics-data analysis6 versions - Latest release: 3 months ago - 7.98 thousand downloads total - 0 stars on GitHub - 1 maintainer
imageTCGA 1.4.0
TCGA Diagnostic Image Database Explorer3 versions - Latest release: 5 months ago - 5.84 thousand downloads total - 4 stars on GitHub - 1 maintainer
shinyDSP 1.4.0
A Shiny App For Visualizing Nanostring GeoMx DSP Data4 versions - Latest release: 4 months ago - 7.43 thousand downloads total - 1 stars on GitHub - 1 maintainer
BiocHubsShiny 1.12.0
View AnnotationHub and ExperimentHub Resources Interactively9 versions - Latest release: 6 months ago - 12.2 thousand downloads total - 0 stars on GitHub - 1 maintainer
miaDash 1.4.0
Dashboard for the interactive analysis and exploration of microbiome data3 versions - Latest release: 6 months ago - 6.49 thousand downloads total - 1 stars on GitHub - 1 maintainer
flowcatchR 1.46.0
Tools to analyze in vivo microscopy imaging data focused on tracking flowing blood cells7 versions - Latest release: 5 months ago - 31 thousand downloads total - 4 stars on GitHub - 1 maintainer
iSEEtree 1.6.0
Interactive visualisation for microbiome data4 versions - Latest release: 6 months ago - 8.95 thousand downloads total - 3 stars on GitHub - 1 maintainer
iSEEpathways 1.10.0
iSEE extension for panels related to pathway analysis6 versions - Latest release: 5 months ago - 11.2 thousand downloads total - 1 stars on GitHub - 1 maintainer
CRISPRball 1.8.0
Shiny Application for Interactive CRISPR Screen Visualization, Exploration, Comparison, and Filte...6 versions - Latest release: 5 months ago - 9.25 thousand downloads total - 13 stars on GitHub - 1 maintainer
MatrixQCvis 1.20.2
Shiny-based interactive data-quality exploration for omics data8 versions - Latest release: about 2 months ago - 15.3 thousand downloads total - 1 maintainer
CytoPipelineGUI 1.10.0
GUI's for visualization of flow cytometry data analysis pipelines6 versions - Latest release: 5 months ago - 9.83 thousand downloads total - 2 stars on GitHub - 1 maintainer
Top 5.4% on bioconductor.org
7 versions - Latest release: 5 months ago - 2 dependent packages - 75.5 thousand downloads total - 56 stars on GitHub - 1 maintainer
pcaExplorer 3.6.0
Interactive Visualization of RNA-seq Data Using a Principal Components Approach7 versions - Latest release: 5 months ago - 2 dependent packages - 75.5 thousand downloads total - 56 stars on GitHub - 1 maintainer
omXplore 1.6.0
Vizualization tools for 'omics' datasets with R9 versions - Latest release: 5 months ago - 12.4 thousand downloads total - 0 stars on GitHub - 1 maintainer
shiny.gosling 1.8.0
A Grammar-based Toolkit for Scalable and Interactive Genomics Data Visualization for R and Shiny7 versions - Latest release: 5 months ago - 1 dependent package - 11.3 thousand downloads total - 1 maintainer
Top 6.5% on bioconductor.org
6 versions - Latest release: 11 months ago - 1 dependent package - 59.3 thousand downloads total - 1 maintainer
interactiveDisplay 1.48.0 removed
Package for enabling powerful shiny web displays of Bioconductor objects6 versions - Latest release: 11 months ago - 1 dependent package - 59.3 thousand downloads total - 1 maintainer
Top 4.7% on bioconductor.org
6 versions - Latest release: 11 months ago - 3 dependent packages - 1.03 million downloads total - 1 maintainer
interactiveDisplayBase 1.48.0 removed
Base package for enabling powerful shiny web displays of Bioconductor objects6 versions - Latest release: 11 months ago - 3 dependent packages - 1.03 million downloads total - 1 maintainer
Related Keywords
Software
43
Visualization
25
GUI
24
QualityControl
13
GeneExpression
11
DifferentialExpression
10
Transcriptomics
8
GeneSetEnrichment
8
Clustering
7
shiny
7
bioconductor
6
r
6
Proteomics
6
ImmunoOncology
6
ReportWriting
6
MassSpectrometry
6
GO
6
Sequencing
6
Pathways
5
DataImport
5
Transcription
5
Infrastructure
5
SingleCell
5
Metabolomics
5
Classification
5
DimensionReduction
4
Genetics
4
Preprocessing
4
gui
3
user-friendly
3
hacktoberfest
3
isee
3
DataRepresentation
3
rna-seq-analysis
3
reproducible-research
3
Normalization
3
RNASeq
3
FeatureExtraction
3
Network
3
PrincipalComponent
3
BatchEffect
2
data-visualization
2
ExperimentalDesign
2
visualization
2
Microarray
2
AnnotationData
2
Annotation
2
Regression
2
transcriptome
2
bioconductor-package
2
rna-seq-data
2
visualisation
2
microbiome
2
Microbiome
2
single-cell
2
CellBasedAssays
2
transcriptomics
2
gene-expression
2
mia
1
Coverage
1
WorkflowStep
1
webapp
1
dashboard
1
bioinformatics
1
fast
1
TwoChannel
1
OneChannel
1
human-cell-atlas
1
feature-extraction
1
dimension-reduction
1
clustering
1
Reactome
1
KEGG
1
pathway-analysis
1
functional-enrichment-analysis
1
data-exploration
1
iseeu
1
u24ca289073
1
prostar2
1
qPCR
1
rpackage
1
orbitrap
1
multiplatform
1
mass-spectrometry
1
Lipidomics
1
Spatial
1
CellBiology
1
fluorescence
1
microscopy
1
particles
1
tracking
1
FunctionalGenomics
1
NetworkEnrichment
1
differential-expression
1
rna-seq
1
SequenceMatching
1
miRNA
1
shiny-apps
1
ImmunoOncology Infrastructure
1
Survival
1