Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
bioconductor.org "Infrastructure" keyword
ReUseData 1.2.2
Reusable and reproducible Data Management5 versions - Latest release: 5 months ago - 1.11 thousand downloads total - 3 stars on GitHub - 1 maintainer
Top 1.5% on bioconductor.org
4 versions - Latest release: 20 days ago - 96 dependent packages - 622 thousand downloads total - 1 maintainer
scater 1.32.0
Single-Cell Analysis Toolkit for Gene Expression Data in R4 versions - Latest release: 20 days ago - 96 dependent packages - 622 thousand downloads total - 1 maintainer
Top 0.2% on bioconductor.org
6 versions - Latest release: 20 days ago - 333 dependent packages - 6.29 million downloads total - 1 maintainer
Biostrings 2.72.0
Efficient manipulation of biological strings6 versions - Latest release: 20 days ago - 333 dependent packages - 6.29 million downloads total - 1 maintainer
Top 0.2% on bioconductor.org
3 versions - Latest release: 20 days ago - 632 dependent packages - 4.97 million downloads total - 1 maintainer
SummarizedExperiment 1.34.0
SummarizedExperiment container3 versions - Latest release: 20 days ago - 632 dependent packages - 4.97 million downloads total - 1 maintainer
Top 0.5% on bioconductor.org
6 versions - Latest release: 20 days ago - 183 dependent packages - 3.32 million downloads total - 1 maintainer
GenomicFeatures 1.56.0
Conveniently import and query gene models6 versions - Latest release: 20 days ago - 183 dependent packages - 3.32 million downloads total - 1 maintainer
Top 0.8% on bioconductor.org
5 versions - Latest release: 20 days ago - 51 dependent packages - 4.77 million downloads total - 1 maintainer
flowCore 2.16.0
flowCore: Basic structures for flow cytometry data5 versions - Latest release: 20 days ago - 51 dependent packages - 4.77 million downloads total - 1 maintainer
Top 0.1% on bioconductor.org
5 versions - Latest release: 20 days ago - 740 dependent packages - 7.45 million downloads total - 1 maintainer
S4Vectors 0.42.0
Foundation of vector-like and list-like containers in Bioconductor5 versions - Latest release: 20 days ago - 740 dependent packages - 7.45 million downloads total - 1 maintainer
Top 0.9% on bioconductor.org
4 versions - Latest release: 20 days ago - 29 dependent packages - 6.47 million downloads total - 1 maintainer
zlibbioc 1.50.0
An R packaged zlib-1.2.54 versions - Latest release: 20 days ago - 29 dependent packages - 6.47 million downloads total - 1 maintainer
Top 0.1% on bioconductor.org
4 versions - Latest release: 20 days ago - 604 dependent packages - 6.34 million downloads total - 1 maintainer
GenomicRanges 1.56.0
Representation and manipulation of genomic intervals4 versions - Latest release: 20 days ago - 604 dependent packages - 6.34 million downloads total - 1 maintainer
Top 1.0% on bioconductor.org
3 versions - Latest release: 20 days ago - 45 dependent packages - 2.99 million downloads total - 1 maintainer
MatrixGenerics 1.16.0
S4 Generic Summary Statistic Functions that Operate on Matrix-Like Objects3 versions - Latest release: 20 days ago - 45 dependent packages - 2.99 million downloads total - 1 maintainer
Top 0.1% on bioconductor.org
3 versions - Latest release: 20 days ago - 563 dependent packages - 8.04 million downloads total - 1 maintainer
IRanges 2.38.0
Foundation of integer range manipulation in Bioconductor3 versions - Latest release: 20 days ago - 563 dependent packages - 8.04 million downloads total - 1 maintainer
Top 1.4% on bioconductor.org
4 versions - Latest release: 20 days ago - 54 dependent packages - 990 thousand downloads total - 1 maintainer
HDF5Array 1.32.0
HDF5 backend for DelayedArray objects4 versions - Latest release: 20 days ago - 54 dependent packages - 990 thousand downloads total - 1 maintainer
Top 0.5% on bioconductor.org
4 versions - Latest release: 9 days ago - 111 dependent packages - 5 million downloads total - 1 maintainer
DelayedArray 0.30.1
A unified framework for working transparently with on-disk and in-memory array-like datasets4 versions - Latest release: 9 days ago - 111 dependent packages - 5 million downloads total - 1 maintainer
Top 0.6% on bioconductor.org
5 versions - Latest release: 20 days ago - 132 dependent packages - 3.57 million downloads total - 1 maintainer
GenomicAlignments 1.40.0
Representation and manipulation of short genomic alignments5 versions - Latest release: 20 days ago - 132 dependent packages - 3.57 million downloads total - 1 maintainer
Top 0.8% on bioconductor.org
5 versions - Latest release: 20 days ago - 129 dependent packages - 2 million downloads total - 1 maintainer
BSgenome 1.72.0
Software infrastructure for efficient representation of full genomes and their SNPs5 versions - Latest release: 20 days ago - 129 dependent packages - 2 million downloads total - 1 maintainer
Top 0.9% on bioconductor.org
3 versions - Latest release: 20 days ago - 36 dependent packages - 6.03 million downloads total - 1 maintainer
XVector 0.44.0
Foundation of external vector representation and manipulation in Bioconductor3 versions - Latest release: 20 days ago - 36 dependent packages - 6.03 million downloads total - 1 maintainer
Top 1.0% on bioconductor.org
3 versions - Latest release: 20 days ago - 201 dependent packages - 1.07 million downloads total - 1 maintainer
SingleCellExperiment 1.26.0
S4 Classes for Single Cell Data3 versions - Latest release: 20 days ago - 201 dependent packages - 1.07 million downloads total - 1 maintainer
Top 0.1% on bioconductor.org
3 versions - Latest release: 20 days ago - 518 dependent packages - 7.92 million downloads total - 1 maintainer
Biobase 2.64.0
Biobase: Base functions for Bioconductor3 versions - Latest release: 20 days ago - 518 dependent packages - 7.92 million downloads total - 1 maintainer
Top 1.7% on bioconductor.org
4 versions - Latest release: 20 days ago - 69 dependent packages - 2.09 million downloads total - 59 stars on GitHub - 1 maintainer
rhdf5 2.48.0
R Interface to HDF54 versions - Latest release: 20 days ago - 69 dependent packages - 2.09 million downloads total - 59 stars on GitHub - 1 maintainer
Top 0.1% on bioconductor.org
3 versions - Latest release: 21 days ago - 729 dependent packages - 8.2 million downloads total - 1 maintainer
BiocGenerics 0.50.0
S4 generic functions used in Bioconductor3 versions - Latest release: 21 days ago - 729 dependent packages - 8.2 million downloads total - 1 maintainer
plyinteractions 1.0.0
Extending tidy verbs to genomic interactions3 versions - Latest release: 6 months ago - 1.03 thousand downloads total - 0 stars on GitHub - 1 maintainer
BufferedMatrix 1.66.0
A matrix data storage object held in temporary files3 versions - Latest release: 6 months ago - 1 dependent package - 33.4 thousand downloads total - 0 stars on GitHub - 1 maintainer
AnVILPublish 1.12.0
Publish Packages and Other Resources to AnVIL Workspaces3 versions - Latest release: 6 months ago - 3.94 thousand downloads total - 1 maintainer
Cardinal 3.4.3
A mass spectrometry imaging toolbox for statistical analysis4 versions - Latest release: 5 months ago - 26.1 thousand downloads total - 1 maintainer
MsBackendMgf 1.10.0
Mass Spectrometry Data Backend for Mascot Generic Format (mgf) Files3 versions - Latest release: 6 months ago - 3 dependent packages - 22 thousand downloads total - 4 stars on GitHub - 2 maintainers
Top 8.0% on bioconductor.org
4 versions - Latest release: 15 days ago - 15 dependent packages - 928 thousand downloads total - 4 stars on GitHub - 1 maintainer
beachmat 2.20.0
Compiling Bioconductor to Handle Each Matrix Type4 versions - Latest release: 15 days ago - 15 dependent packages - 928 thousand downloads total - 4 stars on GitHub - 1 maintainer
BiocPkgTools 1.20.0
Collection of simple tools for learning about Bioconductor Packages3 versions - Latest release: 6 months ago - 13 thousand downloads total - 19 stars on GitHub - 1 maintainer
matter 2.6.1
Scientific computing for out-of-memory signals and images5 versions - Latest release: 11 days ago - 2 dependent packages - 19 thousand downloads total - 52 stars on GitHub - 1 maintainer
VariantExperiment 1.18.0
A RangedSummarizedExperiment Container for VCF/GDS Data with GDS Backend4 versions - Latest release: 22 days ago - 5.08 thousand downloads total - 1 stars on GitHub - 1 maintainer
GDSArray 1.24.0
Representing GDS files as array-like objects3 versions - Latest release: 22 days ago - 3 dependent packages - 10.9 thousand downloads total - 4 stars on GitHub - 1 maintainer
Top 9.4% on bioconductor.org
3 versions - Latest release: 6 months ago - 26.5 thousand downloads total - 1 maintainer
RTCA 1.54.0
Open-source toolkit to analyse data from xCELLigence System (RTCA)3 versions - Latest release: 6 months ago - 26.5 thousand downloads total - 1 maintainer
scTreeViz 1.8.0
R/Bioconductor package to interactively explore and visualize single cell RNA-seq datasets with h...3 versions - Latest release: 6 months ago - 2.46 thousand downloads total - 1 maintainer
Top 5.0% on bioconductor.org
4 versions - Latest release: 5 months ago - 19 dependent packages - 157 thousand downloads total - 16 stars on GitHub - 1 maintainer
MsCoreUtils 1.14.1
Core Utils for Mass Spectrometry Data4 versions - Latest release: 5 months ago - 19 dependent packages - 157 thousand downloads total - 16 stars on GitHub - 1 maintainer
rexposome 1.24.1
Exposome exploration and outcome data analysis3 versions - Latest release: 6 months ago - 1 dependent package - 10.3 thousand downloads total - 1 maintainer
ssrch 1.18.0
a simple search engine3 versions - Latest release: 6 months ago - 1 dependent package - 5.72 thousand downloads total - 1 maintainer
Top 8.6% on bioconductor.org
4 versions - Latest release: 15 days ago - 15 dependent packages - 47.5 thousand downloads total - 31 stars on GitHub - 1 maintainer
Spectra 1.14.0
Spectra Infrastructure for Mass Spectrometry Data4 versions - Latest release: 15 days ago - 15 dependent packages - 47.5 thousand downloads total - 31 stars on GitHub - 1 maintainer
QTLExperiment 1.0.0
S4 classes for QTL summary statistics and metadata2 versions - Latest release: 7 months ago - 1 dependent package - 840 downloads total - 1 stars on GitHub - 1 maintainer
CuratedAtlasQueryR 1.2.0
Queries the Human Cell Atlas3 versions - Latest release: 16 days ago - 1.07 thousand downloads total - 77 stars on GitHub - 1 maintainer
RNAmodR.ML 1.16.0
Detecting patterns of post-transcriptional modifications using machine learning3 versions - Latest release: 6 months ago - 5.02 thousand downloads total - 0 stars on GitHub - 1 maintainer
MQmetrics 1.10.0
Quality Control of Protemics Data3 versions - Latest release: 6 months ago - 2.66 thousand downloads total - 1 maintainer
BSgenomeForge 1.2.3
Forge BSgenome data packages5 versions - Latest release: about 1 month ago - 1 dependent package - 8.28 thousand downloads total - 1 maintainer
pipeFrame 1.18.0
Pipeline framework for bioinformatics in R3 versions - Latest release: 6 months ago - 2 dependent packages - 10.2 thousand downloads total - 1 stars on GitHub - 1 maintainer
Top 1.1% on bioconductor.org
3 versions - Latest release: 22 days ago - 377 dependent packages - 5.55 million downloads total - 63 stars on GitHub - 1 maintainer
BiocParallel 1.38.0
Bioconductor facilities for parallel evaluation3 versions - Latest release: 22 days ago - 377 dependent packages - 5.55 million downloads total - 63 stars on GitHub - 1 maintainer
HiCBricks 1.20.0
Framework for Storing and Accessing Hi-C Data Through HDF Files3 versions - Latest release: 6 months ago - 1 dependent package - 8.09 thousand downloads total - 1 maintainer
SharedObject 1.16.0
Sharing R objects across multiple R processes without memory duplication3 versions - Latest release: 6 months ago - 1 dependent package - 8.69 thousand downloads total - 37 stars on GitHub - 1 maintainer
HumanTranscriptomeCompendium 1.17.0
Tools to work with a Compendium of 181000 human transcriptome sequencing studies3 versions - Latest release: 6 months ago - 5.69 thousand downloads total - 1 maintainer
biodbUniprot 1.8.0
biodbUniprot, a library for connecting to the Uniprot Database3 versions - Latest release: 6 months ago - 2.48 thousand downloads total - 2 stars on GitHub - 1 maintainer
Top 7.3% on bioconductor.org
4 versions - Latest release: about 1 month ago - 2 dependent packages - 181 thousand downloads total - 1 maintainer
RProtoBufLib 2.14.1
C++ headers and static libraries of Protocol buffers4 versions - Latest release: about 1 month ago - 2 dependent packages - 181 thousand downloads total - 1 maintainer
CTDquerier 2.10.0
Package for CTDbase data query, visualization and downstream analysis3 versions - Latest release: 6 months ago - 5.56 thousand downloads total - 1 maintainer
BufferedMatrixMethods 1.66.0
Microarray Data related methods that utlize BufferedMatrix objects3 versions - Latest release: 6 months ago - 31.4 thousand downloads total - 1 maintainer
SparseArray 1.2.4
High-performance sparse data representation and manipulation in R5 versions - Latest release: 3 months ago - 5 dependent packages - 570 thousand downloads total - 1 maintainer
flowBeads 1.40.0
flowBeads: Analysis of flow bead data3 versions - Latest release: 6 months ago - 18.4 thousand downloads total - 1 maintainer
rhdf5client 1.24.0
Access HDF5 content from HDF Scalable Data Service3 versions - Latest release: 6 months ago - 4 dependent packages - 11.5 thousand downloads total - 1 maintainer
basecallQC 1.26.0
Working with Illumina Basecalling and Demultiplexing input and output files3 versions - Latest release: 6 months ago - 10.9 thousand downloads total - 1 maintainer
Top 8.2% on bioconductor.org
3 versions - Latest release: 6 months ago - 38.3 thousand downloads total - 1 maintainer
ChIPsim 1.56.0
Simulation of ChIP-seq experiments3 versions - Latest release: 6 months ago - 38.3 thousand downloads total - 1 maintainer
DelayedTensor 1.8.0
R package for sparse and out-of-core arithmetic and decomposition of Tensor3 versions - Latest release: 6 months ago - 2.52 thousand downloads total - 4 stars on GitHub - 1 maintainer
TreeAndLeaf 1.14.0
Displaying binary trees with focus on dendrogram leaves3 versions - Latest release: 6 months ago - 1 dependent package - 6.98 thousand downloads total - 1 maintainer
Spaniel 1.16.0
Spatial Transcriptomics Analysis3 versions - Latest release: 6 months ago - 6.46 thousand downloads total - 1 maintainer
Travel 1.10.0 removed
An utility to create an ALTREP object with a virtual pointer2 versions - Latest release: 6 months ago - 1.1 thousand downloads total - 4 stars on GitHub - 1 maintainer
ExperimentSubset 1.12.0
Manages subsets of data with Bioconductor Experiment objects3 versions - Latest release: 6 months ago - 3.77 thousand downloads total - 1 maintainer
updateObject 1.6.0
Find/fix old serialized S4 instances3 versions - Latest release: 6 months ago - 1.83 thousand downloads total - 1 maintainer
SCArray 1.10.0
Large-scale single-cell omics data manipulation with GDS files3 versions - Latest release: 6 months ago - 1 dependent package - 3.48 thousand downloads total - 1 stars on GitHub - 1 maintainer
MsFeatures 1.10.0
Functionality for Mass Spectrometry Features3 versions - Latest release: 6 months ago - 2 dependent packages - 52.5 thousand downloads total - 6 stars on GitHub - 1 maintainer
arrayMvout 1.60.0
multivariate outlier detection for expression array QA3 versions - Latest release: 6 months ago - 33.6 thousand downloads total - 1 maintainer
Top 9.9% on bioconductor.org
2 versions - Latest release: 6 months ago - 26 thousand downloads total - 1 maintainer
genbankr 1.30.0 removed
Parsing GenBank files into semantically useful objects2 versions - Latest release: 6 months ago - 26 thousand downloads total - 1 maintainer
epivizrServer 1.30.0
WebSocket server infrastructure for epivizr apps and packages3 versions - Latest release: 6 months ago - 5 dependent packages - 15.2 thousand downloads total - 1 maintainer
mimager 1.26.0
mimager: The Microarray Imager3 versions - Latest release: 6 months ago - 9.09 thousand downloads total - 0 stars on GitHub - 1 maintainer
Top 7.8% on bioconductor.org
3 versions - Latest release: 6 months ago - 39.6 thousand downloads total - 1 maintainer
ChIPseqR 1.56.0
Identifying Protein Binding Sites in High-Throughput Sequencing Data3 versions - Latest release: 6 months ago - 39.6 thousand downloads total - 1 maintainer
rebook 1.12.0
Re-using Content in Bioconductor Books3 versions - Latest release: 6 months ago - 8.22 thousand downloads total - 1 maintainer
Top 7.4% on bioconductor.org
3 versions - Latest release: 6 months ago - 32.2 thousand downloads total - 1 maintainer
panp 1.72.0
Presence-Absence Calls from Negative Strand Matching Probesets3 versions - Latest release: 6 months ago - 32.2 thousand downloads total - 1 maintainer
psygenet2r 1.34.1
psygenet2r - An R package for querying PsyGeNET and to perform comorbidity studies in psychiatric...4 versions - Latest release: 4 months ago - 11.5 thousand downloads total - 1 maintainer
MultimodalExperiment 1.2.0
Integrative Bulk and Single-Cell Experiment Container3 versions - Latest release: 6 months ago - 1.15 thousand downloads total - 1 maintainer
systemPipeShiny 1.12.0
systemPipeShiny: An Interactive Framework for Workflow Management and Visualization3 versions - Latest release: 6 months ago - 4.34 thousand downloads total - 1 maintainer
Top 9.4% on bioconductor.org
3 versions - Latest release: 6 months ago - 26.8 thousand downloads total - 1 maintainer
R453Plus1Toolbox 1.52.0
A package for importing and analyzing data from Roche's Genome Sequencer System3 versions - Latest release: 6 months ago - 26.8 thousand downloads total - 1 maintainer
rRDP 1.36.0
Interface to the RDP Classifier3 versions - Latest release: 6 months ago - 14.4 thousand downloads total - 1 stars on GitHub - 1 maintainer
gpuMagic 1.18.0
An openCL compiler with the capacity to compile R functions and run the code on GPU3 versions - Latest release: 6 months ago - 5.59 thousand downloads total - 10 stars on GitHub - 1 maintainer
RSeqAn 1.22.0
R SeqAn3 versions - Latest release: 6 months ago - 1 dependent package - 7.97 thousand downloads total - 3 stars on GitHub - 1 maintainer
BiocSklearn 1.24.0
interface to python sklearn via Rstudio reticulate3 versions - Latest release: 6 months ago - 15.9 thousand downloads total - 1 maintainer
TFARM 1.24.0
Transcription Factors Association Rules Miner3 versions - Latest release: 6 months ago - 7.46 thousand downloads total - 1 maintainer
Streamer 1.48.0
Enabling stream processing of large files3 versions - Latest release: 6 months ago - 23.1 thousand downloads total - 1 maintainer
LoomExperiment 1.20.0
LoomExperiment container3 versions - Latest release: 6 months ago - 2 dependent packages - 28.2 thousand downloads total - 1 maintainer
epivizrData 1.30.0
Data Management API for epiviz interactive visualization app3 versions - Latest release: 6 months ago - 3 dependent packages - 15.5 thousand downloads total - 1 maintainer
biodbHmdb 1.8.0
biodbHmdb, a library for connecting to the HMDB Database3 versions - Latest release: 6 months ago - 2.61 thousand downloads total - 2 stars on GitHub - 1 maintainer
biodbChebi 1.8.0
biodbChebi, a library for connecting to the ChEBI Database3 versions - Latest release: 6 months ago - 1 dependent package - 3.1 thousand downloads total - 2 stars on GitHub - 1 maintainer
Top 6.2% on bioconductor.org
3 versions - Latest release: 6 months ago - 37.9 thousand downloads total - 1 maintainer
weaver 1.68.0
Tools and extensions for processing Sweave documents3 versions - Latest release: 6 months ago - 37.9 thousand downloads total - 1 maintainer
Top 9.0% on bioconductor.org
3 versions - Latest release: 6 months ago - 13 dependent packages - 48.1 thousand downloads total - 1 maintainer
TreeSummarizedExperiment 2.10.0
TreeSummarizedExperiment: a S4 Class for Data with Tree Structures3 versions - Latest release: 6 months ago - 13 dependent packages - 48.1 thousand downloads total - 1 maintainer
Top 8.0% on bioconductor.org
3 versions - Latest release: 6 months ago - 29.1 thousand downloads total - 1 maintainer
TypeInfo 1.68.0
Optional Type Specification Prototype3 versions - Latest release: 6 months ago - 29.1 thousand downloads total - 1 maintainer
restfulSE 1.24.0
Access matrix-like HDF5 server content or BigQuery content through a SummarizedExperiment interface3 versions - Latest release: 6 months ago - 3 dependent packages - 10.6 thousand downloads total - 1 maintainer
MetID 1.20.0
Network-based prioritization of putative metabolite IDs3 versions - Latest release: 6 months ago - 5.66 thousand downloads total - 1 stars on GitHub - 1 maintainer
systemPipeTools 1.10.0
Tools for data visualization3 versions - Latest release: 6 months ago - 2.93 thousand downloads total - 1 maintainer
tidySpatialExperiment 1.0.0
Brings SpatialExperiment to the tidyverse2 versions - Latest release: 7 days ago - 347 downloads total - 4 stars on GitHub - 1 maintainer
Top 6.1% on bioconductor.org
3 versions - Latest release: 6 months ago - 1 dependent package - 51.3 thousand downloads total - 5 stars on GitHub - 1 maintainer
fmcsR 1.44.0
Mismatch Tolerant Maximum Common Substructure Searching3 versions - Latest release: 6 months ago - 1 dependent package - 51.3 thousand downloads total - 5 stars on GitHub - 1 maintainer
RGMQL 1.22.1
GenoMetric Query Language for R/Bioconductor4 versions - Latest release: about 1 month ago - 6.14 thousand downloads total - 1 maintainer
Modstrings 1.18.0
Working with modified nucleotide sequences3 versions - Latest release: 6 months ago - 4 dependent packages - 10.7 thousand downloads total - 1 stars on GitHub - 1 maintainer
Top 4.6% on bioconductor.org
3 versions - Latest release: 22 days ago - 45 dependent packages - 1.11 million downloads total - 15 stars on GitHub - 1 maintainer
DelayedMatrixStats 1.26.0
Functions that Apply to Rows and Columns of 'DelayedMatrix' Objects3 versions - Latest release: 22 days ago - 45 dependent packages - 1.11 million downloads total - 15 stars on GitHub - 1 maintainer
hmdbQuery 1.22.0
utilities for exploration of human metabolome database3 versions - Latest release: 6 months ago - 9.07 thousand downloads total - 1 maintainer
LRBaseDbi 2.12.1
DBI to construct LRBase-related package4 versions - Latest release: 2 months ago - 1 dependent package - 7.99 thousand downloads total - 1 maintainer
PSMatch 1.6.0
Handling and Managing Peptide Spectrum Matches3 versions - Latest release: 6 months ago - 2 dependent packages - 6.2 thousand downloads total - 3 stars on GitHub - 1 maintainer
Top 10.0% on bioconductor.org
3 versions - Latest release: 6 months ago - 33.6 thousand downloads total - 1 maintainer
BioMVCClass 1.70.0
Model-View-Controller (MVC) Classes That Use Biobase3 versions - Latest release: 6 months ago - 33.6 thousand downloads total - 1 maintainer
Top 8.3% on bioconductor.org
3 versions - Latest release: 6 months ago - 1 dependent package - 30.5 thousand downloads total - 1 maintainer
MVCClass 1.76.0
Model-View-Controller (MVC) Classes3 versions - Latest release: 6 months ago - 1 dependent package - 30.5 thousand downloads total - 1 maintainer
Related Keywords
Software
242
DataImport
84
DataRepresentation
58
Sequencing
42
Visualization
31
ImmunoOncology
24
bioconductor
24
MassSpectrometry
22
Proteomics
22
Metabolomics
21
SingleCell
18
Genetics
18
r
17
QualityControl
17
Annotation
17
Clustering
16
GeneExpression
15
RNASeq
13
Coverage
13
Transcriptomics
12
DifferentialExpression
12
GenomeAnnotation
10
CellBasedAssays
10
mass-spectrometry
10
GUI
9
Microarray
9
Normalization
8
bioconductor-package
8
Alignment
7
proteomics
7
BiomedicalInformatics
7
Preprocessing
7
bioinformatics
7
ReportWriting
7
ThirdPartyClient
7
core-package
6
WorkflowStep
6
AssayDomain
6
SequenceMatching
6
rstats
6
metabolomics
6
KEGG
5
Transcription
5
MicrotitrePlateAssay
5
Classification
5
Spatial
4
FlowCytometry
4
GO
4
Cheminformatics
4
Pharmacogenetics
4
SNP
4
Pharmacogenomics
4
DimensionReduction
4
StatisticalMethod
4
Network
4
ExperimentalDesign
4
ShinyApps
4
GraphAndNetwork
4
hdf5
4
Pathways
3
GeneSetEnrichment
3
ChIPSeq
3
gds-format
3
HiC
3
iseeu
3
GenomeAssembly
3
tidyverse
3
OneChannel
3
MultipleComparison
3
package
3
BiologicalQuestion
3
rna
3
infrastructure
2
pca
2
genomics
2
PrincipalComponent
2
HighThroughputSequencing
2
TwoChannel
2
Metagenomics
2
sequences
2
ImagingMassSpectrometry
2
snp
2
ProprietaryPlatforms
2
Technology
2
singlecellexperiment
2
tibble
2
GenotypingArray
2
human-cell-atlas
2
Bioinformatics
2
rpackage
2
filter-plugin
1
mutations
1
MethylSeq
1
RiboSeq
1
compression
1
shiny-r
1
hdf5-library
1
WorkflowManagement
1
rhdf5
1
workflows
1