Ecosyste.ms: Packages

An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.

pypi.org "gtf" keyword

gtf 0.0.6 removed
A GTF installer is a command line tool that quickly and efficiently installs software and librari...
2 versions - Latest release: about 1 year ago - 1 stars on GitHub - 1 maintainer
mrdoxmrgt 0.1.6
A small example package
15 versions - Latest release: about 1 year ago - 84 downloads last month - 2 stars on GitHub - 1 maintainer
mrdoxgtf 0.0.1
A small example package
1 version - Latest release: about 1 year ago - 14 downloads last month - 2 stars on GitHub - 1 maintainer
gtfd 0.0.1
A small example package
1 version - Latest release: about 1 year ago - 15 downloads last month - 2 stars on GitHub - 1 maintainer
gtfr 0.0.1
A small example package
1 version - Latest release: about 1 year ago - 14 downloads last month - 2 stars on GitHub - 1 maintainer
gtfh 0.0.1
A small example package
1 version - Latest release: about 1 year ago - 14 downloads last month - 2 stars on GitHub - 1 maintainer
gtfg 0.0.1
A small example package
1 version - Latest release: about 1 year ago - 24 downloads last month - 2 stars on GitHub - 1 maintainer
gtfj 0.0.1
A small example package
1 version - Latest release: about 1 year ago - 14 downloads last month - 2 stars on GitHub - 1 maintainer
gtfast 0.0.3
GTFast - cache and subset a `.gtf` file as a `.csv` for faster subsequent use.
2 versions - Latest release: about 2 years ago - 1 dependent repositories - 25 downloads last month - 2 stars on GitHub - 1 maintainer
pyreference 0.7.5
Library for working with reference genomes and gene GTF/GFFs
12 versions - Latest release: 10 months ago - 1 dependent repositories - 70 downloads last month - 4 stars on GitHub - 1 maintainer
pygtftk 1.6.2
The Python GTF toolkit (pygtftk) package: easy handling of GTF files
26 versions - Latest release: about 2 years ago - 1 dependent repositories - 411 downloads last month - 41 stars on GitHub - 1 maintainer
pygeno 2.0.0
A python package for Personalized Genomics and Proteomics
18 versions - Latest release: about 4 years ago - 1 dependent repositories - 34 downloads last month - 305 stars on GitHub - 2 maintainers
mbf-gtf 0.4.0
Fast Parser for Ensembl formated GTF Files to Pandas DataFrames
7 versions - Latest release: about 2 years ago - 1 dependent repositories - 130 downloads last month - 1 stars on GitHub - 1 maintainer
collect-columns 1.0.0
Retrieve a column for each in a set of tables, placing them in a single output table.
3 versions - Latest release: over 3 years ago - 1 dependent repositories - 34 downloads last month - 1 stars on GitHub - 2 maintainers
anngtf 0.0.11
anngtf - lift annotations from a `.gtf` file to your AnnData object.
3 versions - Latest release: about 2 years ago - 32 downloads last month - 2 stars on GitHub - 1 maintainer
genotations 0.1.7
Genotations - python library to work with genomes and primers
16 versions - Latest release: 8 months ago - 91 downloads last month - 2 stars on GitHub - 1 maintainer
gtci 1.1.2
A GTCI installer is a command line tool that quickly and efficiently installs software and librar...
8 versions - Latest release: 7 months ago - 122 downloads last month - 2 stars on GitHub - 1 maintainer
fuc 0.37.0 💰
Frequently used commands in bioinformatics
38 versions - Latest release: 8 months ago - 1 dependent package - 2 dependent repositories - 633 downloads last month - 44 stars on GitHub - 1 maintainer
Top 9.0% on pypi.org
deeptoolsintervals 0.1.9
A python module creating/accessing GTF-based interval trees with associated meta-data
3 versions - Latest release: almost 5 years ago - 1 dependent package - 15 dependent repositories - 27.2 thousand downloads last month - 6 stars on GitHub - 1 maintainer
Related Keywords
greytechno 9 mrgt 9 a9 7 a8 7 a7 7 a6 7 a5 7 a4 7 a3 7 a2 7 a1 7 bioinformatics 6 genomics 6 gff 5 bed 4 python 3 cli 3 genes 2 genome 2 GTF 2 genomes 2 gene 2 vcf 2 annotations 2 rna-seq 2 single-cell 2 gencode 2 anndata 2 deploymentpipeline 2 automation 2 dependencies 2 installer 2 packagemanagers 2 ensembl 2 files 1 utils 1 tsv 1 software 1 csv 1 snps 1 medical 1 genome-sequencing 1 genome-browser 1 genome-annotation 1 genetics 1 polars 1 transcriptomics 1 gtci 1 mr_gt 1 api 1 bam 1 cram 1 fasta 1 fastq 1 maf 1 sam 1 visualization 1 interval-tree 1 libraries 1 BED 1 bigwig 1 cds 1 chip-seq 1 dna-sequences 1 exon 1 genomic 1 intron 1 ngs 1 splicing 1 transcript 1 tss 1 tts 1 proteogenomics 1 proteomics 1 medicine 1 research 1 personalized 1 sequence 1 protein 1 biology 1 cancer 1 cancer-genomes 1 cancer-genomics 1 csv-parser 1