Ecosyste.ms: Packages

An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.

bioconductor.org "cancer-genomics" keyword

CaMutQC 1.0.0

An R Package for Comprehensive Filtration and Selection of Cancer Somatic Mutations
1 version - Latest release: about 1 month ago - 373 downloads total - 6 stars on GitHub - 1 maintainer

Top 1.5% on bioconductor.org

maftools 2.20.0 💰

Summarize, Analyze and Visualize MAF Files
3 versions - Latest release: about 1 month ago - 9 dependent packages - 227 thousand downloads total - 423 stars on GitHub - 1 maintainer

RAIDS 1.0.0

Accurate Inference of Genetic Ancestry from Cancer Sequences
2 versions - Latest release: 7 months ago - 1.03 thousand downloads total - 5 stars on GitHub - 1 maintainer

cfDNAPro extracts and Visualises biological features from whole genome sequencing data of cell-fr...
3 versions - Latest release: 7 months ago - 3.41 thousand downloads total - 22 stars on GitHub - 1 maintainer

cbpManager 1.12.0

Generate, manage, and edit data and metadata files suitable for the import in cBioPortal for Canc...
3 versions - Latest release: 28 days ago - 3.21 thousand downloads total - 6 stars on GitHub - 1 maintainer

Related Keywords

Software 5 Visualization 3 Sequencing 3 genomics 2 bioinformatics 2 WholeGenome 2 DataRepresentation 2 whole-genome-sequencing 2 r 2 genomics-visualization 1 early-detection 1 cell-free-dna 1 cancer-research 1 rna-sequencing 1 rna-seq 1 r-package 1 r-language 1 liquid-biopsy 1 swgs 1 DataImport 1 GUI 1 ImmunoOncology 1 Preprocessing 1 ThirdPartyClient 1 cbioportal 1 clinical-data 1 filegenerator 1 mutation-data 1 patient-data 1 GeneTarget 1 QualityControl 1 somatic-mutations 1 Classification 1 DNASeq 1 DriverMutation 1 FeatureExtraction 1 FunctionalGenomics 1 SomaticMutation 1 Survival 1 VariantAnnotation 1 cancer-genome-atlas 1 maf-files 1 tcga 1 DimensionReduction 1 GeneticVariability 1 Genetics 1 PrincipalComponent 1 ancestry 1 exome-sequencing 1 inference 1