bioconductor.org "MultipleSequenceAlignment" keyword
Top 1.7% on bioconductor.org
14 versions - Latest release: 4 months ago - 28 dependent packages - 2.73 million downloads total - 1 maintainer
ggtree 4.2.0
an R package for visualization of tree and annotation data14 versions - Latest release: 4 months ago - 28 dependent packages - 2.73 million downloads total - 1 maintainer
R4RNA 1.40.0
An R package for RNA visualization and analysis7 versions - Latest release: 3 months ago - 2 dependent packages - 64.9 thousand downloads total - 1 maintainer
Top 1.8% on bioconductor.org
9 versions - Latest release: 4 months ago - 14 dependent packages - 439 thousand downloads total - 2 maintainers
Rsubread 2.26.0
Mapping, quantification and variant analysis of sequencing data9 versions - Latest release: 4 months ago - 14 dependent packages - 439 thousand downloads total - 2 maintainers
rhinotypeR 1.6.0
Rhinovirus genotyping4 versions - Latest release: 3 months ago - 5.19 thousand downloads total - 4 stars on GitHub - 1 maintainer
surfaltr 1.18.0
Rapid Comparison of Surface Protein Isoform Membrane Topologies Through surfaltr7 versions - Latest release: 4 months ago - 11.2 thousand downloads total - 1 maintainer
sitePath 1.28.0
Phylogeny-based sequence clustering with site polymorphism8 versions - Latest release: 3 months ago - 14.7 thousand downloads total - 11 stars on GitHub - 1 maintainer
odseq 1.40.0
Outlier detection in multiple sequence alignments7 versions - Latest release: 3 months ago - 20.1 thousand downloads total - 1 maintainer
GenomAutomorphism 1.14.1
Compute the automorphisms between DNA's Abelian group representations9 versions - Latest release: 11 days ago - 9.87 thousand downloads total - 0 stars on GitHub - 1 maintainer
rprimer 1.16.0
Design Degenerate Oligos from a Multiple DNA Sequence Alignment7 versions - Latest release: 4 months ago - 11.4 thousand downloads total - 3 stars on GitHub - 1 maintainer
tanggle 1.18.0
Visualization of Phylogenetic Networks7 versions - Latest release: 3 months ago - 11.6 thousand downloads total - 10 stars on GitHub - 1 maintainer
ggseqalign 1.6.0
Minimal Visualization of Sequence Alignments4 versions - Latest release: 3 months ago - 4.98 thousand downloads total - 0 stars on GitHub - 1 maintainer
fRagmentomics 1.0.0
Extract Fragmentomics Features and Mutational Status1 version - Latest release: 4 months ago - 1.18 thousand downloads total - 1 maintainer
ggmsa 1.18.0
Plot Multiple Sequence Alignment using 'ggplot2'8 versions - Latest release: 3 months ago - 52.9 thousand downloads total - 1 maintainer
Top 3.1% on bioconductor.org
7 versions - Latest release: 3 months ago - 7 dependent packages - 2.28 million downloads total - 1 maintainer
treeio 1.36.1
Base Classes and Functions for Phylogenetic Tree Input and Output7 versions - Latest release: 3 months ago - 7 dependent packages - 2.28 million downloads total - 1 maintainer
Top 5.9% on bioconductor.org
7 versions - Latest release: 3 months ago - 1 maintainer
muscle 3.54.0
Multiple Sequence Alignment with MUSCLE7 versions - Latest release: 3 months ago - 1 maintainer
Top 2.8% on bioconductor.org
8 versions - Latest release: 3 months ago - 4 dependent packages - 21 stars on GitHub - 1 maintainer
msa 1.44.0
Multiple Sequence Alignment8 versions - Latest release: 3 months ago - 4 dependent packages - 21 stars on GitHub - 1 maintainer
LymphoSeq 1.40.0
Analyze high-throughput sequencing of T and B cell receptors7 versions - Latest release: 3 months ago - 22.3 thousand downloads total - 1 maintainer
bcSeq 1.34.0
Fast Sequence Mapping in High-Throughput shRNA and CRISPR Screens7 versions - Latest release: 3 months ago - 17.2 thousand downloads total - 0 stars on GitHub - 1 maintainer
rfaRm 1.24.1
An R interface to the Rfam database10 versions - Latest release: 2 months ago - 12.6 thousand downloads total - 2 maintainers
LowMACA 1.31.0 removed
LowMACA - Low frequency Mutation Analysis via Consensus Alignment2 versions - Latest release: over 2 years ago - 12.2 thousand downloads total - 2 maintainers
Related Keywords
Software
20
Alignment
17
Sequencing
8
Visualization
8
DataImport
7
SequenceMatching
5
Phylogenetics
5
Genetics
4
MultipleComparison
4
DataRepresentation
3
Clustering
3
Annotation
3
FunctionalGenomics
2
VariantDetection
2
WholeGenome
2
SNP
2
IndelDetection
2
ImmunoOncology
2
Preprocessing
2
genome
1
genome-algebra
1
Coverage
1
ddPCR
1
qPCR
1
alignment
1
bioinformatics
1
ggplot2-enhancements
1
minimalistic
1
r
1
visualization
1
DNASeq
1
TargetedResequencing
1
Technology
1
ATACSeq
1
CRISPR
1
ThirdPartyClient
1
SomaticMutation
1
GenomeAnnotation
1
GeneticVariability
1
QualityControl
1
RNASeq
1
GeneRegulation
1
GeneFusionDetection
1
GeneExpression
1
SingleCell
1
VariantAnnotation
1
ChIPSeq
1
SplicedAlignment
1
mutation
1
phylogenetics
1
ComparativeGenomics
1
MathematicalBiology
1
ReproducibleResearch
1
genetic-code
1
genetic-code-algebra
1